EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000029299 (Gene tree)
Gene ID: 100342829
Gene Symbol: CHD3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 20517 bases
Position: chr19:11291900-11312416
Accession: 100342829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000018080	ResIII	PF04851.15	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000024566	CHD3-201	5805	XM_008270769	ENSOCUP00000018080	1934 (aa)	-	G1TM73

Gene Model

Click here to download ENSOCUG00000029299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000029299's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000029299	CHD3	91	67.256	ENSOCUG00000008215	-	95	66.277

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000029299	CHD3	100	93.845	ENSG00000170004	CHD3	99	94.783	Homo_sapiens
ENSOCUG00000029299	CHD3	79	77.722	ENSAPOG00000005614	chd3	92	78.632	Acanthochromis_polyacanthus
ENSOCUG00000029299	CHD3	71	94.083	ENSAMEG00000003025	-	100	93.713	Ailuropoda_melanoleuca
ENSOCUG00000029299	CHD3	80	77.241	ENSACIG00000019671	chd3	98	78.501	Amphilophus_citrinellus
ENSOCUG00000029299	CHD3	79	79.214	ENSAOCG00000023784	chd3	95	80.200	Amphiprion_ocellaris
ENSOCUG00000029299	CHD3	76	75.553	ENSAPEG00000006341	chd3	96	69.877	Amphiprion_percula
ENSOCUG00000029299	CHD3	99	68.895	ENSATEG00000000848	chd3	98	70.155	Anabas_testudineus
ENSOCUG00000029299	CHD3	99	81.170	ENSACAG00000004276	CHD3	95	81.285	Anolis_carolinensis
ENSOCUG00000029299	CHD3	100	90.793	ENSANAG00000034323	CHD3	99	93.620	Aotus_nancymaae
ENSOCUG00000029299	CHD3	93	74.917	ENSACLG00000009222	chd3	99	69.764	Astatotilapia_calliptera
ENSOCUG00000029299	CHD3	100	93.086	ENSBTAG00000014377	CHD3	97	93.202	Bos_taurus
ENSOCUG00000029299	CHD3	100	93.693	ENSCJAG00000014766	CHD3	98	93.791	Callithrix_jacchus
ENSOCUG00000029299	CHD3	100	92.574	ENSCAFG00000016859	CHD3	98	93.333	Canis_familiaris
ENSOCUG00000029299	CHD3	96	92.100	ENSCAFG00020007422	CHD3	100	92.884	Canis_lupus_dingo
ENSOCUG00000029299	CHD3	100	93.238	ENSCHIG00000016737	CHD3	99	93.388	Capra_hircus
ENSOCUG00000029299	CHD3	100	93.543	ENSTSYG00000035658	CHD3	98	93.642	Carlito_syrichta
ENSOCUG00000029299	CHD3	100	90.646	ENSCAPG00000014864	CHD3	98	90.646	Cavia_aperea
ENSOCUG00000029299	CHD3	100	92.781	ENSCPOG00000022653	CHD3	98	92.930	Cavia_porcellus
ENSOCUG00000029299	CHD3	100	93.642	ENSCCAG00000034792	CHD3	98	93.740	Cebus_capucinus
ENSOCUG00000029299	CHD3	100	93.591	ENSCATG00000041717	CHD3	98	93.690	Cercocebus_atys
ENSOCUG00000029299	CHD3	100	93.035	ENSCLAG00000010523	CHD3	99	93.184	Chinchilla_lanigera
ENSOCUG00000029299	CHD3	100	93.388	ENSCSAG00000011122	CHD3	99	93.537	Chlorocebus_sabaeus
ENSOCUG00000029299	CHD3	89	80.308	ENSCPBG00000011966	CHD3	99	83.576	Chrysemys_picta_bellii
ENSOCUG00000029299	CHD3	100	93.540	ENSCANG00000037641	CHD3	98	93.639	Colobus_angolensis_palliatus
ENSOCUG00000029299	CHD3	100	91.561	ENSCGRG00001011306	Chd3	99	92.065	Cricetulus_griseus_chok1gshd
ENSOCUG00000029299	CHD3	95	98.413	ENSCGRG00000007878	Chd3	99	98.413	Cricetulus_griseus_crigri
ENSOCUG00000029299	CHD3	91	72.973	ENSCSEG00000004489	chd3	99	75.016	Cynoglossus_semilaevis
ENSOCUG00000029299	CHD3	87	75.477	ENSCVAG00000007293	chd3	94	76.463	Cyprinodon_variegatus
ENSOCUG00000029299	CHD3	91	78.922	ENSDARG00000021405	chd3	99	71.622	Danio_rerio
ENSOCUG00000029299	CHD3	100	81.491	ENSDNOG00000047846	CHD3	98	81.744	Dasypus_novemcinctus
ENSOCUG00000029299	CHD3	100	92.523	ENSDORG00000010713	Chd3	99	92.621	Dipodomys_ordii
ENSOCUG00000029299	CHD3	98	86.871	ENSETEG00000017733	CHD3	99	86.916	Echinops_telfairi
ENSOCUG00000029299	CHD3	55	77.869	ENSEBUG00000008310	chd3	99	67.369	Eptatretus_burgeri
ENSOCUG00000029299	CHD3	94	92.838	ENSEASG00005019360	CHD3	100	92.997	Equus_asinus_asinus
ENSOCUG00000029299	CHD3	94	92.892	ENSECAG00000010051	CHD3	100	93.051	Equus_caballus
ENSOCUG00000029299	CHD3	92	94.915	ENSEEUG00000015205	CHD3	92	94.915	Erinaceus_europaeus
ENSOCUG00000029299	CHD3	77	76.367	ENSELUG00000019499	chd3	97	76.880	Esox_lucius
ENSOCUG00000029299	CHD3	100	92.832	ENSFCAG00000009629	CHD3	95	92.981	Felis_catus
ENSOCUG00000029299	CHD3	100	90.696	ENSFDAG00000008220	CHD3	98	90.793	Fukomys_damarensis
ENSOCUG00000029299	CHD3	89	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSOCUG00000029299	CHD3	59	73.061	ENSGAFG00000004055	chd3	99	74.979	Gambusia_affinis
ENSOCUG00000029299	CHD3	99	68.424	ENSGACG00000019275	chd3	100	68.312	Gasterosteus_aculeatus
ENSOCUG00000029299	CHD3	76	84.309	ENSGAGG00000013164	CHD3	98	85.075	Gopherus_agassizii
ENSOCUG00000029299	CHD3	100	93.744	ENSGGOG00000013496	CHD3	98	93.842	Gorilla_gorilla
ENSOCUG00000029299	CHD3	100	92.933	ENSHGLG00000012017	CHD3	98	93.032	Heterocephalus_glaber_female
ENSOCUG00000029299	CHD3	89	89.639	ENSHGLG00100013902	CHD3	99	88.889	Heterocephalus_glaber_male
ENSOCUG00000029299	CHD3	95	68.967	ENSHCOG00000010170	chd3	96	69.363	Hippocampus_comes
ENSOCUG00000029299	CHD3	85	78.906	ENSIPUG00000003271	chd3	94	78.231	Ictalurus_punctatus
ENSOCUG00000029299	CHD3	100	93.438	ENSSTOG00000025907	CHD3	99	93.588	Ictidomys_tridecemlineatus
ENSOCUG00000029299	CHD3	100	92.323	ENSJJAG00000017633	Chd3	99	92.167	Jaculus_jaculus
ENSOCUG00000029299	CHD3	90	75.051	ENSKMAG00000019292	chd3	97	71.012	Kryptolebias_marmoratus
ENSOCUG00000029299	CHD3	89	71.881	ENSLBEG00000028485	chd3	92	72.060	Labrus_bergylta
ENSOCUG00000029299	CHD3	97	70.550	ENSLACG00000008031	CHD3	98	70.446	Latimeria_chalumnae
ENSOCUG00000029299	CHD3	99	73.187	ENSLOCG00000013965	chd3	97	74.317	Lepisosteus_oculatus
ENSOCUG00000029299	CHD3	92	92.734	ENSLAFG00000000572	CHD3	99	88.912	Loxodonta_africana
ENSOCUG00000029299	CHD3	100	93.540	ENSMFAG00000020113	CHD3	98	93.639	Macaca_fascicularis
ENSOCUG00000029299	CHD3	100	91.150	ENSMMUG00000022221	CHD3	98	91.247	Macaca_mulatta
ENSOCUG00000029299	CHD3	100	93.540	ENSMNEG00000001728	CHD3	99	92.713	Macaca_nemestrina
ENSOCUG00000029299	CHD3	100	93.591	ENSMLEG00000032249	CHD3	98	93.690	Mandrillus_leucophaeus
ENSOCUG00000029299	CHD3	85	72.387	ENSMAMG00000000564	chd3	97	73.440	Mastacembelus_armatus
ENSOCUG00000029299	CHD3	100	91.307	ENSMAUG00000013873	Chd3	99	89.113	Mesocricetus_auratus
ENSOCUG00000029299	CHD3	100	93.340	ENSMICG00000008741	CHD3	98	90.761	Microcebus_murinus
ENSOCUG00000029299	CHD3	100	91.713	ENSMOCG00000004848	Chd3	99	92.218	Microtus_ochrogaster
ENSOCUG00000029299	CHD3	96	71.021	ENSMMOG00000012699	chd3	99	70.653	Mola_mola
ENSOCUG00000029299	CHD3	94	87.609	ENSMODG00000007509	CHD3	100	87.466	Monodelphis_domestica
ENSOCUG00000029299	CHD3	100	91.569	MGP_CAROLIEiJ_G0016564	Chd3	99	90.447	Mus_caroli
ENSOCUG00000029299	CHD3	100	91.671	ENSMUSG00000018474	Chd3	99	90.550	Mus_musculus
ENSOCUG00000029299	CHD3	100	92.124	MGP_PahariEiJ_G0017695	Chd3	99	90.805	Mus_pahari
ENSOCUG00000029299	CHD3	100	91.671	MGP_SPRETEiJ_G0017400	Chd3	99	90.550	Mus_spretus
ENSOCUG00000029299	CHD3	88	92.977	ENSMPUG00000008861	CHD3	100	92.683	Mustela_putorius_furo
ENSOCUG00000029299	CHD3	100	92.421	ENSMLUG00000014643	-	98	92.570	Myotis_lucifugus
ENSOCUG00000029299	CHD3	100	92.527	ENSNGAG00000000773	Chd3	97	92.625	Nannospalax_galili
ENSOCUG00000029299	CHD3	85	72.169	ENSNBRG00000000636	chd3	95	72.252	Neolamprologus_brichardi
ENSOCUG00000029299	CHD3	99	90.051	ENSNLEG00000009770	CHD3	99	90.649	Nomascus_leucogenys
ENSOCUG00000029299	CHD3	86	86.427	ENSMEUG00000005852	CHD3	87	87.644	Notamacropus_eugenii
ENSOCUG00000029299	CHD3	96	91.977	ENSOPRG00000011069	CHD3	100	92.079	Ochotona_princeps
ENSOCUG00000029299	CHD3	100	92.984	ENSODEG00000017785	CHD3	98	93.133	Octodon_degus
ENSOCUG00000029299	CHD3	76	76.115	ENSONIG00000009292	chd3	100	71.042	Oreochromis_niloticus
ENSOCUG00000029299	CHD3	83	69.356	ENSORLG00000007107	chd3	93	69.837	Oryzias_latipes
ENSOCUG00000029299	CHD3	57	71.555	ENSORLG00020008387	chd3	95	72.527	Oryzias_latipes_hni
ENSOCUG00000029299	CHD3	71	78.505	ENSOMEG00000013691	chd3	97	74.583	Oryzias_melastigma
ENSOCUG00000029299	CHD3	100	92.883	ENSOGAG00000003216	CHD3	99	92.981	Otolemur_garnettii
ENSOCUG00000029299	CHD3	100	92.799	ENSOARG00000017855	CHD3	98	93.047	Ovis_aries
ENSOCUG00000029299	CHD3	100	91.529	ENSPPAG00000032886	CHD3	98	91.625	Pan_paniscus
ENSOCUG00000029299	CHD3	100	92.984	ENSPPRG00000000626	CHD3	98	93.133	Panthera_pardus
ENSOCUG00000029299	CHD3	100	93.896	ENSPTRG00000008714	CHD3	98	93.995	Pan_troglodytes
ENSOCUG00000029299	CHD3	100	93.591	ENSPANG00000023938	CHD3	98	93.690	Papio_anubis
ENSOCUG00000029299	CHD3	96	75.270	ENSPKIG00000006305	chd3	99	74.904	Paramormyrops_kingsleyae
ENSOCUG00000029299	CHD3	55	88.535	ENSPSIG00000010177	CHD3	98	88.919	Pelodiscus_sinensis
ENSOCUG00000029299	CHD3	100	91.561	ENSPEMG00000014262	Chd3	99	92.065	Peromyscus_maniculatus_bairdii
ENSOCUG00000029299	CHD3	100	88.340	ENSPCIG00000005442	CHD3	99	92.395	Phascolarctos_cinereus
ENSOCUG00000029299	CHD3	97	68.826	ENSPFOG00000012464	chd3	92	69.830	Poecilia_formosa
ENSOCUG00000029299	CHD3	88	72.018	ENSPLAG00000002887	chd3	96	72.727	Poecilia_latipinna
ENSOCUG00000029299	CHD3	53	80.000	ENSPMEG00000016725	chd3	94	71.626	Poecilia_mexicana
ENSOCUG00000029299	CHD3	92	76.781	ENSPREG00000011044	chd3	99	76.799	Poecilia_reticulata
ENSOCUG00000029299	CHD3	99	90.768	ENSPPYG00000007940	CHD3	98	90.867	Pongo_abelii
ENSOCUG00000029299	CHD3	96	92.763	ENSPCAG00000004350	CHD3	96	92.392	Procavia_capensis
ENSOCUG00000029299	CHD3	100	93.289	ENSPCOG00000020952	CHD3	98	93.438	Propithecus_coquereli
ENSOCUG00000029299	CHD3	87	92.042	ENSPVAG00000016344	CHD3	86	92.042	Pteropus_vampyrus
ENSOCUG00000029299	CHD3	95	77.184	ENSPNAG00000020393	chd3	98	78.805	Pygocentrus_nattereri
ENSOCUG00000029299	CHD3	94	90.786	ENSRNOG00000009722	Chd3	100	91.161	Rattus_norvegicus
ENSOCUG00000029299	CHD3	100	90.507	ENSRBIG00000033562	CHD3	99	89.753	Rhinopithecus_bieti
ENSOCUG00000029299	CHD3	100	92.014	ENSRROG00000029554	CHD3	99	91.725	Rhinopithecus_roxellana
ENSOCUG00000029299	CHD3	100	93.795	ENSSBOG00000020719	CHD3	99	92.931	Saimiri_boliviensis_boliviensis
ENSOCUG00000029299	CHD3	100	88.364	ENSSHAG00000014412	CHD3	99	88.155	Sarcophilus_harrisii
ENSOCUG00000029299	CHD3	92	71.346	ENSSFOG00015023123	chd3	98	70.962	Scleropages_formosus
ENSOCUG00000029299	CHD3	94	70.037	ENSSMAG00000006451	chd3	100	70.798	Scophthalmus_maximus
ENSOCUG00000029299	CHD3	55	70.906	ENSSDUG00000005792	chd3	95	71.912	Seriola_dumerili
ENSOCUG00000029299	CHD3	91	75.943	ENSSPAG00000013694	chd3	97	77.397	Stegastes_partitus
ENSOCUG00000029299	CHD3	100	93.137	ENSSSCG00000021363	CHD3	100	92.888	Sus_scrofa
ENSOCUG00000029299	CHD3	75	74.685	ENSTRUG00000014990	chd3	93	72.872	Takifugu_rubripes
ENSOCUG00000029299	CHD3	98	70.174	ENSTNIG00000012998	chd3	99	69.665	Tetraodon_nigroviridis
ENSOCUG00000029299	CHD3	63	97.619	ENSTBEG00000011454	-	71	97.619	Tupaia_belangeri
ENSOCUG00000029299	CHD3	96	95.710	ENSTTRG00000010295	CHD3	96	95.860	Tursiops_truncatus
ENSOCUG00000029299	CHD3	93	91.554	ENSUAMG00000005475	CHD3	99	91.712	Ursus_americanus
ENSOCUG00000029299	CHD3	55	98.148	ENSVPAG00000010794	-	62	98.148	Vicugna_pacos
ENSOCUG00000029299	CHD3	96	92.361	ENSVVUG00000028011	CHD3	99	92.891	Vulpes_vulpes
ENSOCUG00000029299	CHD3	99	69.853	ENSXETG00000012991	chd3	92	70.842	Xenopus_tropicalis
ENSOCUG00000029299	CHD3	54	81.532	ENSXCOG00000000809	chd3	96	81.982	Xiphophorus_couchianus
ENSOCUG00000029299	CHD3	79	77.157	ENSXMAG00000016035	chd3	97	80.217	Xiphophorus_maculatus