EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000029594 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 1692 bases
Position: chrGL018833:616257-617948
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	1	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	2	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	3	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	4	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	5	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	6	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	7	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	8	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	9	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	10	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	11	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	12	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	13	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	14	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	15	16
ENSOCUP00000026726	zf-C2H2	PF00096.26	9.6e-94	16	16
ENSOCUP00000026726	zf-met	PF12874.7	7.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000033679	-	1692	-	ENSOCUP00000026726	563 (aa)	-	U3KNB7

Gene Model

Click here to download ENSOCUG00000029594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000029594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000029594	-	93	48.462	ENSOCUG00000029755	-	89	48.462
ENSOCUG00000029594	-	84	47.447	ENSOCUG00000029391	ZNF668	85	47.447
ENSOCUG00000029594	-	95	44.860	ENSOCUG00000005422	SNAI1	60	44.860
ENSOCUG00000029594	-	83	57.143	ENSOCUG00000011797	SALL4	56	57.143
ENSOCUG00000029594	-	97	53.360	ENSOCUG00000027634	-	84	53.360
ENSOCUG00000029594	-	96	48.718	ENSOCUG00000007715	-	88	48.718
ENSOCUG00000029594	-	76	37.607	ENSOCUG00000012116	OVOL2	53	37.607
ENSOCUG00000029594	-	93	38.849	ENSOCUG00000002274	BCL6B	59	38.849
ENSOCUG00000029594	-	94	54.902	ENSOCUG00000003561	ZNF2	84	54.902
ENSOCUG00000029594	-	90	30.986	ENSOCUG00000003685	ZNF423	90	30.986
ENSOCUG00000029594	-	94	50.119	ENSOCUG00000029071	ZNF81	83	50.119
ENSOCUG00000029594	-	98	53.226	ENSOCUG00000029075	ZNF582	68	54.064
ENSOCUG00000029594	-	90	31.797	ENSOCUG00000017015	ZFAT	58	31.797
ENSOCUG00000029594	-	94	52.995	ENSOCUG00000017842	ZNF235	71	52.995
ENSOCUG00000029594	-	89	46.729	ENSOCUG00000012254	-	50	46.729
ENSOCUG00000029594	-	94	57.428	ENSOCUG00000029223	ZNF699	78	57.428
ENSOCUG00000029594	-	92	43.391	ENSOCUG00000005876	-	100	44.253
ENSOCUG00000029594	-	81	32.599	ENSOCUG00000024670	ZNF770	99	32.895
ENSOCUG00000029594	-	91	41.618	ENSOCUG00000009378	ZNF236	79	41.618
ENSOCUG00000029594	-	88	35.789	ENSOCUG00000011713	GTF3A	72	35.789
ENSOCUG00000029594	-	91	36.255	ENSOCUG00000029615	ZNF526	87	35.370
ENSOCUG00000029594	-	92	58.586	ENSOCUG00000015340	-	98	58.586
ENSOCUG00000029594	-	82	52.308	ENSOCUG00000023005	ZNF367	54	52.308
ENSOCUG00000029594	-	91	36.453	ENSOCUG00000013454	PRDM5	76	36.453
ENSOCUG00000029594	-	92	41.224	ENSOCUG00000020899	ZBTB47	50	41.224
ENSOCUG00000029594	-	98	52.896	ENSOCUG00000001924	ZFP1	80	52.896
ENSOCUG00000029594	-	92	52.332	ENSOCUG00000029133	ZNF768	66	51.163
ENSOCUG00000029594	-	67	40.741	ENSOCUG00000023837	-	91	40.741
ENSOCUG00000029594	-	96	60.000	ENSOCUG00000029445	-	99	60.000
ENSOCUG00000029594	-	100	62.313	ENSOCUG00000029276	-	91	63.065
ENSOCUG00000029594	-	90	34.653	ENSOCUG00000014377	ZNF646	97	32.632

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000029594	-	90	85.443	ENSCPOG00000033345	-	96	85.443	Cavia_porcellus
ENSOCUG00000029594	-	99	77.046	ENSCGRG00001023858	Zfp560	74	77.046	Cricetulus_griseus_chok1gshd
ENSOCUG00000029594	-	99	77.046	ENSCGRG00000012088	Zfp560	74	77.046	Cricetulus_griseus_crigri
ENSOCUG00000029594	-	90	85.759	ENSFDAG00000008687	-	97	85.759	Fukomys_damarensis
ENSOCUG00000029594	-	99	82.290	ENSHGLG00000019054	-	97	86.076	Heterocephalus_glaber_female
ENSOCUG00000029594	-	99	82.290	ENSHGLG00100015134	-	85	82.290	Heterocephalus_glaber_male
ENSOCUG00000029594	-	99	82.060	ENSSTOG00000033893	-	87	82.060	Ictidomys_tridecemlineatus
ENSOCUG00000029594	-	91	75.461	ENSMOCG00000007908	Zfp560	79	71.634	Microtus_ochrogaster
ENSOCUG00000029594	-	99	79.892	ENSNGAG00000015897	Zfp560	81	79.892	Nannospalax_galili
ENSOCUG00000029594	-	90	85.127	ENSODEG00000017047	-	91	85.127	Octodon_degus
ENSOCUG00000029594	-	100	50.275	ENSOGAG00000025131	ZNF121	99	50.275	Otolemur_garnettii
ENSOCUG00000029594	-	98	77.960	ENSRNOG00000048394	Zfp560	85	77.960	Rattus_norvegicus