EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000000020 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 876 bases
Position: chrJH652621.1:4521-5396
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000000021	Ribosomal_L28e	PF01778.17	1.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000000023	-	768	-	ENSODEP00000000021	255 (aa)	-	-

Gene Model

Click here to download ENSODEG00000000020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000000020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000000020	-	100	79.110	ENSODEG00000005524	-	100	82.192
ENSODEG00000000020	-	100	76.923	ENSODEG00000002030	-	100	77.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000000020	-	100	74.333	ENSG00000198042	MAK16	98	86.567	Homo_sapiens
ENSODEG00000000020	-	100	60.526	ENSAPOG00000024252	mak16	99	60.596	Acanthochromis_polyacanthus
ENSODEG00000000020	-	100	74.074	ENSAMEG00000002852	MAK16	100	74.411	Ailuropoda_melanoleuca
ENSODEG00000000020	-	98	63.869	ENSACIG00000004962	mak16	98	63.869	Amphilophus_citrinellus
ENSODEG00000000020	-	98	61.149	ENSAOCG00000018230	mak16	98	60.811	Amphiprion_ocellaris
ENSODEG00000000020	-	100	61.462	ENSAPEG00000022237	mak16	99	61.130	Amphiprion_percula
ENSODEG00000000020	-	100	63.605	ENSATEG00000012637	mak16	100	63.605	Anabas_testudineus
ENSODEG00000000020	-	100	69.283	ENSACAG00000000888	MAK16	100	69.966	Anolis_carolinensis
ENSODEG00000000020	-	100	75.000	ENSANAG00000030954	MAK16	100	75.333	Aotus_nancymaae
ENSODEG00000000020	-	100	60.204	ENSACLG00000006342	mak16	100	59.864	Astatotilapia_calliptera
ENSODEG00000000020	-	100	59.547	ENSAMXG00000033330	mak16	100	58.900	Astyanax_mexicanus
ENSODEG00000000020	-	100	75.839	ENSBTAG00000033504	MAK16	100	76.510	Bos_taurus
ENSODEG00000000020	-	78	49.785	WBGene00015811	C16A3.6	100	42.284	Caenorhabditis_elegans
ENSODEG00000000020	-	100	75.667	ENSCJAG00000048459	MAK16	100	76.000	Callithrix_jacchus
ENSODEG00000000020	-	99	75.593	ENSCAFG00000006325	MAK16	99	75.932	Canis_familiaris
ENSODEG00000000020	-	99	75.593	ENSCAFG00020001324	MAK16	99	75.932	Canis_lupus_dingo
ENSODEG00000000020	-	100	75.503	ENSCHIG00000017057	-	100	76.174	Capra_hircus
ENSODEG00000000020	-	100	68.817	ENSCHIG00000014271	-	100	68.817	Capra_hircus
ENSODEG00000000020	-	100	74.582	ENSTSYG00000028100	MAK16	100	75.251	Carlito_syrichta
ENSODEG00000000020	-	100	76.094	ENSCCAG00000025382	MAK16	100	76.431	Cebus_capucinus
ENSODEG00000000020	-	100	75.000	ENSCATG00000030566	MAK16	100	75.333	Cercocebus_atys
ENSODEG00000000020	-	100	76.768	ENSCLAG00000002726	MAK16	100	77.441	Chinchilla_lanigera
ENSODEG00000000020	-	100	67.340	ENSCHOG00000009081	MAK16	100	68.581	Choloepus_hoffmanni
ENSODEG00000000020	-	100	66.113	ENSCPBG00000000176	MAK16	100	68.771	Chrysemys_picta_bellii
ENSODEG00000000020	-	67	64.249	ENSCING00000007225	-	97	64.356	Ciona_intestinalis
ENSODEG00000000020	-	67	62.176	ENSCSAVG00000005901	-	97	51.579	Ciona_savignyi
ENSODEG00000000020	-	100	75.333	ENSCANG00000032211	MAK16	100	75.667	Colobus_angolensis_palliatus
ENSODEG00000000020	-	100	75.168	ENSCGRG00001016542	Mak16	100	75.503	Cricetulus_griseus_chok1gshd
ENSODEG00000000020	-	100	75.168	ENSCGRG00000007547	Mak16	100	75.503	Cricetulus_griseus_crigri
ENSODEG00000000020	-	100	59.732	ENSCSEG00000010069	mak16	100	60.900	Cynoglossus_semilaevis
ENSODEG00000000020	-	100	62.583	ENSCVAG00000017294	mak16	100	63.245	Cyprinodon_variegatus
ENSODEG00000000020	-	100	60.328	ENSDARG00000003527	mak16	100	60.328	Danio_rerio
ENSODEG00000000020	-	100	75.585	ENSDNOG00000008424	MAK16	100	76.254	Dasypus_novemcinctus
ENSODEG00000000020	-	100	70.992	ENSDORG00000024387	-	100	69.466	Dipodomys_ordii
ENSODEG00000000020	-	98	73.898	ENSDORG00000015722	-	99	74.576	Dipodomys_ordii
ENSODEG00000000020	-	77	48.133	FBgn0030067	Rbm13	78	46.642	Drosophila_melanogaster
ENSODEG00000000020	-	98	52.881	ENSEBUG00000011900	mak16	98	52.542	Eptatretus_burgeri
ENSODEG00000000020	-	100	75.839	ENSEASG00005016762	MAK16	100	76.174	Equus_asinus_asinus
ENSODEG00000000020	-	100	76.174	ENSECAG00000016532	MAK16	100	76.510	Equus_caballus
ENSODEG00000000020	-	100	72.000	ENSEEUG00000006280	MAK16	100	73.333	Erinaceus_europaeus
ENSODEG00000000020	-	100	61.765	ENSELUG00000008291	mak16	100	61.765	Esox_lucius
ENSODEG00000000020	-	100	75.932	ENSFCAG00000033972	MAK16	100	73.898	Felis_catus
ENSODEG00000000020	-	100	65.753	ENSFALG00000006827	MAK16	100	69.178	Ficedula_albicollis
ENSODEG00000000020	-	100	74.247	ENSFDAG00000012817	MAK16	100	75.251	Fukomys_damarensis
ENSODEG00000000020	-	100	61.386	ENSFHEG00000007084	mak16	100	61.386	Fundulus_heteroclitus
ENSODEG00000000020	-	98	59.864	ENSGMOG00000000511	mak16	99	61.224	Gadus_morhua
ENSODEG00000000020	-	100	68.836	ENSGALG00000001663	MAK16	100	69.521	Gallus_gallus
ENSODEG00000000020	-	100	60.667	ENSGAFG00000015800	mak16	100	60.667	Gambusia_affinis
ENSODEG00000000020	-	99	61.092	ENSGACG00000001081	mak16	99	62.116	Gasterosteus_aculeatus
ENSODEG00000000020	-	100	66.779	ENSGAGG00000022177	MAK16	100	67.450	Gopherus_agassizii
ENSODEG00000000020	-	100	75.333	ENSGGOG00000010487	MAK16	100	75.667	Gorilla_gorilla
ENSODEG00000000020	-	100	60.563	ENSHBUG00000006023	mak16	100	60.563	Haplochromis_burtoni
ENSODEG00000000020	-	99	75.421	ENSHGLG00000002981	MAK16	99	75.421	Heterocephalus_glaber_female
ENSODEG00000000020	-	99	75.421	ENSHGLG00100007722	MAK16	99	75.421	Heterocephalus_glaber_male
ENSODEG00000000020	-	99	48.311	ENSHCOG00000013162	mak16	99	49.502	Hippocampus_comes
ENSODEG00000000020	-	100	57.097	ENSIPUG00000005863	mak16	100	57.419	Ictalurus_punctatus
ENSODEG00000000020	-	100	74.832	ENSSTOG00000007812	MAK16	100	74.161	Ictidomys_tridecemlineatus
ENSODEG00000000020	-	100	75.000	ENSJJAG00000015237	-	100	75.685	Jaculus_jaculus
ENSODEG00000000020	-	100	67.491	ENSJJAG00000020605	-	100	67.491	Jaculus_jaculus
ENSODEG00000000020	-	92	73.864	ENSJJAG00000000383	-	100	73.106	Jaculus_jaculus
ENSODEG00000000020	-	100	60.197	ENSKMAG00000011338	mak16	100	59.868	Kryptolebias_marmoratus
ENSODEG00000000020	-	100	60.784	ENSLBEG00000026813	mak16	100	60.458	Labrus_bergylta
ENSODEG00000000020	-	100	66.118	ENSLACG00000018758	MAK16	100	66.118	Latimeria_chalumnae
ENSODEG00000000020	-	100	61.415	ENSLOCG00000015135	mak16	100	64.630	Lepisosteus_oculatus
ENSODEG00000000020	-	100	74.161	ENSLAFG00000026404	MAK16	100	74.832	Loxodonta_africana
ENSODEG00000000020	-	100	75.000	ENSMFAG00000031257	MAK16	100	75.333	Macaca_fascicularis
ENSODEG00000000020	-	100	75.000	ENSMMUG00000010244	MAK16	100	75.333	Macaca_mulatta
ENSODEG00000000020	-	100	75.000	ENSMNEG00000035461	MAK16	100	75.333	Macaca_nemestrina
ENSODEG00000000020	-	100	75.251	ENSMLEG00000028683	MAK16	100	75.585	Mandrillus_leucophaeus
ENSODEG00000000020	-	100	61.794	ENSMAMG00000018478	mak16	99	61.462	Mastacembelus_armatus
ENSODEG00000000020	-	100	62.092	ENSMZEG00005001916	mak16	100	62.092	Maylandia_zebra
ENSODEG00000000020	-	98	62.626	ENSMGAG00000001635	MAK16	99	66.330	Meleagris_gallopavo
ENSODEG00000000020	-	100	73.826	ENSMAUG00000008496	Mak16	100	73.826	Mesocricetus_auratus
ENSODEG00000000020	-	100	74.667	ENSMICG00000013106	MAK16	100	75.000	Microcebus_murinus
ENSODEG00000000020	-	100	72.333	ENSMOCG00000007445	Mak16	100	73.667	Microtus_ochrogaster
ENSODEG00000000020	-	89	53.668	ENSMMOG00000020734	mak16	99	53.668	Mola_mola
ENSODEG00000000020	-	99	59.468	ENSMODG00000011096	MAK16	98	61.775	Monodelphis_domestica
ENSODEG00000000020	-	98	58.446	ENSMALG00000003829	mak16	98	57.732	Monopterus_albus
ENSODEG00000000020	-	100	74.576	MGP_CAROLIEiJ_G0030957	Mak16	100	74.237	Mus_caroli
ENSODEG00000000020	-	100	74.324	ENSMUSG00000031578	Mak16	100	75.000	Mus_musculus
ENSODEG00000000020	-	100	73.986	MGP_PahariEiJ_G0021426	Mak16	100	74.662	Mus_pahari
ENSODEG00000000020	-	100	72.819	MGP_SPRETEiJ_G0032075	Mak16	100	73.826	Mus_spretus
ENSODEG00000000020	-	100	74.237	ENSMPUG00000010181	MAK16	100	74.915	Mustela_putorius_furo
ENSODEG00000000020	-	100	75.168	ENSMLUG00000002758	MAK16	100	75.839	Myotis_lucifugus
ENSODEG00000000020	-	100	72.391	ENSNGAG00000008772	Mak16	100	72.054	Nannospalax_galili
ENSODEG00000000020	-	100	75.000	ENSNLEG00000028118	MAK16	100	75.333	Nomascus_leucogenys
ENSODEG00000000020	-	100	68.227	ENSMEUG00000006945	MAK16	100	69.231	Notamacropus_eugenii
ENSODEG00000000020	-	99	61.056	ENSOPRG00000002116	MAK16	99	60.265	Ochotona_princeps
ENSODEG00000000020	-	100	62.583	ENSONIG00000000560	mak16	100	62.252	Oreochromis_niloticus
ENSODEG00000000020	-	84	72.199	ENSOANG00000002395	MAK16	90	72.177	Ornithorhynchus_anatinus
ENSODEG00000000020	-	100	74.161	ENSOCUG00000008735	MAK16	100	74.832	Oryctolagus_cuniculus
ENSODEG00000000020	-	99	60.678	ENSORLG00000019058	mak16	99	61.695	Oryzias_latipes
ENSODEG00000000020	-	99	61.017	ENSORLG00015007275	mak16	99	62.034	Oryzias_latipes_hsok
ENSODEG00000000020	-	99	59.532	ENSOMEG00000009317	mak16	99	59.801	Oryzias_melastigma
ENSODEG00000000020	-	98	59.736	ENSOGAG00000024416	MAK16	99	64.286	Otolemur_garnettii
ENSODEG00000000020	-	100	75.168	ENSOARG00000000384	MAK16	100	75.839	Ovis_aries
ENSODEG00000000020	-	100	74.333	ENSPPAG00000035102	MAK16	100	74.667	Pan_paniscus
ENSODEG00000000020	-	100	75.593	ENSPPRG00000002317	MAK16	100	73.559	Panthera_pardus
ENSODEG00000000020	-	100	75.593	ENSPTIG00000014223	MAK16	100	73.559	Panthera_tigris_altaica
ENSODEG00000000020	-	100	74.086	ENSPTRG00000020149	MAK16	100	74.419	Pan_troglodytes
ENSODEG00000000020	-	100	73.770	ENSPANG00000010420	MAK16	100	74.098	Papio_anubis
ENSODEG00000000020	-	100	60.912	ENSPKIG00000002082	mak16	100	62.541	Paramormyrops_kingsleyae
ENSODEG00000000020	-	98	63.366	ENSPSIG00000012396	MAK16	98	65.677	Pelodiscus_sinensis
ENSODEG00000000020	-	100	58.033	ENSPMGG00000004162	mak16	100	58.361	Periophthalmus_magnuspinnatus
ENSODEG00000000020	-	100	72.483	ENSPEMG00000015171	Mak16	100	73.154	Peromyscus_maniculatus_bairdii
ENSODEG00000000020	-	100	69.231	ENSPCIG00000028005	MAK16	100	69.900	Phascolarctos_cinereus
ENSODEG00000000020	-	100	62.333	ENSPFOG00000001068	mak16	100	62.333	Poecilia_formosa
ENSODEG00000000020	-	100	61.873	ENSPLAG00000022551	mak16	100	61.873	Poecilia_latipinna
ENSODEG00000000020	-	100	61.667	ENSPMEG00000006460	mak16	100	61.667	Poecilia_mexicana
ENSODEG00000000020	-	100	75.000	ENSPPYG00000018501	MAK16	100	75.333	Pongo_abelii
ENSODEG00000000020	-	100	57.432	ENSPCAG00000016090	MAK16	100	58.108	Procavia_capensis
ENSODEG00000000020	-	59	81.875	ENSPCOG00000018065	-	100	81.875	Propithecus_coquereli
ENSODEG00000000020	-	100	70.307	ENSPVAG00000004692	MAK16	100	70.990	Pteropus_vampyrus
ENSODEG00000000020	-	99	62.500	ENSPNAG00000014528	mak16	99	62.868	Pygocentrus_nattereri
ENSODEG00000000020	-	100	74.403	ENSRNOG00000010783	Mak16	100	75.085	Rattus_norvegicus
ENSODEG00000000020	-	100	75.000	ENSRBIG00000039940	MAK16	100	75.333	Rhinopithecus_bieti
ENSODEG00000000020	-	100	75.000	ENSRROG00000032196	MAK16	100	75.333	Rhinopithecus_roxellana
ENSODEG00000000020	-	61	50.282	YAL025C	-	58	50.282	Saccharomyces_cerevisiae
ENSODEG00000000020	-	100	75.667	ENSSBOG00000030325	MAK16	100	76.000	Saimiri_boliviensis_boliviensis
ENSODEG00000000020	-	100	68.333	ENSSHAG00000007593	MAK16	100	70.333	Sarcophilus_harrisii
ENSODEG00000000020	-	100	65.116	ENSSFOG00015019447	mak16	100	65.116	Scleropages_formosus
ENSODEG00000000020	-	85	63.258	ENSSFOG00015019462	-	100	63.258	Scleropages_formosus
ENSODEG00000000020	-	100	60.927	ENSSMAG00000018432	mak16	100	61.258	Scophthalmus_maximus
ENSODEG00000000020	-	100	60.518	ENSSDUG00000013093	mak16	99	59.871	Seriola_dumerili
ENSODEG00000000020	-	98	60.333	ENSSLDG00000002408	mak16	98	59.333	Seriola_lalandi_dorsalis
ENSODEG00000000020	-	77	72.072	ENSSARG00000009574	MAK16	96	72.973	Sorex_araneus
ENSODEG00000000020	-	100	68.966	ENSSPUG00000008956	MAK16	100	68.966	Sphenodon_punctatus
ENSODEG00000000020	-	100	60.396	ENSSPAG00000005102	mak16	99	60.066	Stegastes_partitus
ENSODEG00000000020	-	71	67.935	ENSSSCG00000032618	-	71	68.306	Sus_scrofa
ENSODEG00000000020	-	100	75.084	ENSSSCG00000036947	MAK16	100	75.421	Sus_scrofa
ENSODEG00000000020	-	99	58.621	ENSTGUG00000017303	MAK16	99	59.310	Taeniopygia_guttata
ENSODEG00000000020	-	100	62.329	ENSTRUG00000011544	mak16	99	62.671	Takifugu_rubripes
ENSODEG00000000020	-	100	54.828	ENSTBEG00000001861	MAK16	99	54.483	Tupaia_belangeri
ENSODEG00000000020	-	100	73.737	ENSTTRG00000013015	MAK16	100	74.074	Tursiops_truncatus
ENSODEG00000000020	-	100	74.747	ENSUAMG00000026894	MAK16	100	75.084	Ursus_americanus
ENSODEG00000000020	-	100	74.747	ENSUMAG00000021133	MAK16	100	75.084	Ursus_maritimus
ENSODEG00000000020	-	100	66.892	ENSVPAG00000006017	MAK16	100	67.230	Vicugna_pacos
ENSODEG00000000020	-	99	75.254	ENSVVUG00000019933	MAK16	99	75.593	Vulpes_vulpes
ENSODEG00000000020	-	100	65.000	ENSXETG00000016495	mak16	100	65.333	Xenopus_tropicalis
ENSODEG00000000020	-	98	54.849	ENSXCOG00000012528	mak16	96	53.691	Xiphophorus_couchianus
ENSODEG00000000020	-	100	61.000	ENSXMAG00000029335	mak16	100	61.000	Xiphophorus_maculatus