EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000000235 (Gene tree)
Gene ID: 101561522
Gene Symbol: Rnaseh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 5978 bases
Position: chrJH651866.1:212790-218767
Accession: 101561522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000000260	RNase_H	PF00075.24	7.7e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000000277	-	870	-	ENSODEP00000000260	289 (aa)	-	-

Gene Model

Click here to download ENSODEG00000000235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000000235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000000235	Rnaseh1	97	77.972	ENSG00000171865	RNASEH1	100	77.972	Homo_sapiens
ENSODEG00000000235	Rnaseh1	95	53.741	ENSAPOG00000000412	rnaseh1	96	54.422	Acanthochromis_polyacanthus
ENSODEG00000000235	Rnaseh1	90	79.851	ENSAMEG00000018433	RNASEH1	100	78.049	Ailuropoda_melanoleuca
ENSODEG00000000235	Rnaseh1	92	55.596	ENSACIG00000014666	rnaseh1	91	55.596	Amphilophus_citrinellus
ENSODEG00000000235	Rnaseh1	94	54.483	ENSAOCG00000015210	rnaseh1	94	54.828	Amphiprion_ocellaris
ENSODEG00000000235	Rnaseh1	94	55.172	ENSAPEG00000014104	rnaseh1	94	55.517	Amphiprion_percula
ENSODEG00000000235	Rnaseh1	94	55.172	ENSATEG00000000598	rnaseh1	95	57.353	Anabas_testudineus
ENSODEG00000000235	Rnaseh1	82	62.353	ENSAPLG00000001961	RNASEH1	99	62.353	Anas_platyrhynchos
ENSODEG00000000235	Rnaseh1	87	54.882	ENSACAG00000016857	rnaseh1	92	54.882	Anolis_carolinensis
ENSODEG00000000235	Rnaseh1	97	79.720	ENSANAG00000024055	RNASEH1	100	79.720	Aotus_nancymaae
ENSODEG00000000235	Rnaseh1	92	53.846	ENSACLG00000006741	rnaseh1	91	54.545	Astatotilapia_calliptera
ENSODEG00000000235	Rnaseh1	94	52.143	ENSAMXG00000042940	rnaseh1	97	51.685	Astyanax_mexicanus
ENSODEG00000000235	Rnaseh1	96	76.325	ENSBTAG00000016235	RNASEH1	99	76.325	Bos_taurus
ENSODEG00000000235	Rnaseh1	86	40.562	WBGene00004382	rnh-1.0	95	40.562	Caenorhabditis_elegans
ENSODEG00000000235	Rnaseh1	97	77.586	ENSCJAG00000035450	RNASEH1	100	77.586	Callithrix_jacchus
ENSODEG00000000235	Rnaseh1	97	78.049	ENSCAFG00000003259	RNASEH1	100	78.049	Canis_familiaris
ENSODEG00000000235	Rnaseh1	53	88.961	ENSCAFG00020004994	RNASEH1	99	88.961	Canis_lupus_dingo
ENSODEG00000000235	Rnaseh1	79	65.957	ENSCHIG00000022230	-	99	65.957	Capra_hircus
ENSODEG00000000235	Rnaseh1	96	76.761	ENSCHIG00000022264	-	99	76.761	Capra_hircus
ENSODEG00000000235	Rnaseh1	97	78.322	ENSTSYG00000012926	RNASEH1	99	78.322	Carlito_syrichta
ENSODEG00000000235	Rnaseh1	82	88.382	ENSCAPG00000004813	RNASEH1	99	88.382	Cavia_aperea
ENSODEG00000000235	Rnaseh1	100	85.374	ENSCPOG00000022278	Rnaseh1	100	85.374	Cavia_porcellus
ENSODEG00000000235	Rnaseh1	97	78.276	ENSCCAG00000038017	RNASEH1	100	78.276	Cebus_capucinus
ENSODEG00000000235	Rnaseh1	97	70.629	ENSCATG00000016818	-	100	70.629	Cercocebus_atys
ENSODEG00000000235	Rnaseh1	97	77.273	ENSCATG00000016515	-	100	77.273	Cercocebus_atys
ENSODEG00000000235	Rnaseh1	97	90.141	ENSCLAG00000002440	RNASEH1	100	90.141	Chinchilla_lanigera
ENSODEG00000000235	Rnaseh1	97	76.923	ENSCSAG00000006943	RNASEH1	100	76.923	Chlorocebus_sabaeus
ENSODEG00000000235	Rnaseh1	68	80.711	ENSCHOG00000008547	RNASEH1	97	80.711	Choloepus_hoffmanni
ENSODEG00000000235	Rnaseh1	86	63.806	ENSCPBG00000021620	RNASEH1	98	63.806	Chrysemys_picta_bellii
ENSODEG00000000235	Rnaseh1	88	38.571	ENSCING00000014054	-	94	38.571	Ciona_intestinalis
ENSODEG00000000235	Rnaseh1	78	37.712	ENSCSAVG00000000009	-	99	37.712	Ciona_savignyi
ENSODEG00000000235	Rnaseh1	97	77.273	ENSCANG00000037763	RNASEH1	100	77.273	Colobus_angolensis_palliatus
ENSODEG00000000235	Rnaseh1	97	76.923	ENSCGRG00001008950	Rnaseh1	100	77.273	Cricetulus_griseus_chok1gshd
ENSODEG00000000235	Rnaseh1	97	76.923	ENSCGRG00000006029	Rnaseh1	100	77.273	Cricetulus_griseus_crigri
ENSODEG00000000235	Rnaseh1	87	54.724	ENSCSEG00000005741	rnaseh1	96	52.518	Cynoglossus_semilaevis
ENSODEG00000000235	Rnaseh1	89	55.882	ENSCVAG00000018717	rnaseh1	90	55.882	Cyprinodon_variegatus
ENSODEG00000000235	Rnaseh1	86	55.263	ENSDARG00000042571	rnaseh1	96	55.263	Danio_rerio
ENSODEG00000000235	Rnaseh1	97	74.653	ENSDNOG00000016056	RNASEH1	100	74.653	Dasypus_novemcinctus
ENSODEG00000000235	Rnaseh1	96	77.032	ENSDORG00000000704	Rnaseh1	99	77.032	Dipodomys_ordii
ENSODEG00000000235	Rnaseh1	93	36.538	FBgn0023171	rnh1	97	36.538	Drosophila_melanogaster
ENSODEG00000000235	Rnaseh1	97	70.383	ENSETEG00000012674	RNASEH1	100	70.383	Echinops_telfairi
ENSODEG00000000235	Rnaseh1	85	47.405	ENSEBUG00000008898	rnaseh1	97	47.405	Eptatretus_burgeri
ENSODEG00000000235	Rnaseh1	85	47.410	ENSEBUG00000006116	rnaseh1	77	47.410	Eptatretus_burgeri
ENSODEG00000000235	Rnaseh1	97	75.694	ENSEASG00005022200	RNASEH1	99	75.694	Equus_asinus_asinus
ENSODEG00000000235	Rnaseh1	97	75.347	ENSECAG00000020695	RNASEH1	99	75.347	Equus_caballus
ENSODEG00000000235	Rnaseh1	92	52.982	ENSELUG00000010112	rnaseh1	94	52.982	Esox_lucius
ENSODEG00000000235	Rnaseh1	97	77.352	ENSFCAG00000025832	RNASEH1	100	77.352	Felis_catus
ENSODEG00000000235	Rnaseh1	96	57.237	ENSFALG00000002069	RNASEH1	99	57.237	Ficedula_albicollis
ENSODEG00000000235	Rnaseh1	99	81.911	ENSFDAG00000002035	RNASEH1	90	81.911	Fukomys_damarensis
ENSODEG00000000235	Rnaseh1	86	55.642	ENSGMOG00000013818	rnaseh1	88	55.642	Gadus_morhua
ENSODEG00000000235	Rnaseh1	95	59.459	ENSGALG00000016389	RNASEH1	98	59.459	Gallus_gallus
ENSODEG00000000235	Rnaseh1	86	56.654	ENSGAFG00000001776	rnaseh1	89	56.654	Gambusia_affinis
ENSODEG00000000235	Rnaseh1	93	53.147	ENSGACG00000011935	rnaseh1	94	53.147	Gasterosteus_aculeatus
ENSODEG00000000235	Rnaseh1	86	63.100	ENSGAGG00000009150	RNASEH1	61	63.838	Gopherus_agassizii
ENSODEG00000000235	Rnaseh1	97	77.622	ENSGGOG00000034822	RNASEH1	100	77.622	Gorilla_gorilla
ENSODEG00000000235	Rnaseh1	92	53.147	ENSHBUG00000004666	rnaseh1	91	53.846	Haplochromis_burtoni
ENSODEG00000000235	Rnaseh1	97	83.217	ENSHGLG00000002585	Rnaseh1	93	83.217	Heterocephalus_glaber_female
ENSODEG00000000235	Rnaseh1	97	83.217	ENSHGLG00100005105	Rnaseh1	93	83.217	Heterocephalus_glaber_male
ENSODEG00000000235	Rnaseh1	94	54.027	ENSHCOG00000012329	rnaseh1	95	54.027	Hippocampus_comes
ENSODEG00000000235	Rnaseh1	86	60.474	ENSIPUG00000023060	rnaseh1	96	60.474	Ictalurus_punctatus
ENSODEG00000000235	Rnaseh1	95	81.786	ENSSTOG00000012774	RNASEH1	100	81.786	Ictidomys_tridecemlineatus
ENSODEG00000000235	Rnaseh1	87	76.471	ENSJJAG00000020238	Rnaseh1	100	76.471	Jaculus_jaculus
ENSODEG00000000235	Rnaseh1	97	63.958	ENSJJAG00000008994	-	100	63.958	Jaculus_jaculus
ENSODEG00000000235	Rnaseh1	97	71.025	ENSJJAG00000021481	-	100	71.025	Jaculus_jaculus
ENSODEG00000000235	Rnaseh1	86	57.252	ENSKMAG00000001373	rnaseh1	88	57.252	Kryptolebias_marmoratus
ENSODEG00000000235	Rnaseh1	94	53.091	ENSLBEG00000004480	rnaseh1	96	55.639	Labrus_bergylta
ENSODEG00000000235	Rnaseh1	88	55.396	ENSLACG00000007100	RNASEH1	89	57.401	Latimeria_chalumnae
ENSODEG00000000235	Rnaseh1	85	57.303	ENSLOCG00000017212	rnaseh1	96	58.052	Lepisosteus_oculatus
ENSODEG00000000235	Rnaseh1	96	75.874	ENSLAFG00000015091	RNASEH1	99	75.874	Loxodonta_africana
ENSODEG00000000235	Rnaseh1	97	70.280	ENSMFAG00000002323	-	100	70.280	Macaca_fascicularis
ENSODEG00000000235	Rnaseh1	97	76.923	ENSMFAG00000000063	-	100	76.923	Macaca_fascicularis
ENSODEG00000000235	Rnaseh1	97	70.280	ENSMMUG00000019280	-	100	70.280	Macaca_mulatta
ENSODEG00000000235	Rnaseh1	97	70.629	ENSMNEG00000029676	-	100	70.629	Macaca_nemestrina
ENSODEG00000000235	Rnaseh1	97	77.273	ENSMNEG00000040183	-	100	77.273	Macaca_nemestrina
ENSODEG00000000235	Rnaseh1	97	73.427	ENSMLEG00000028662	-	100	73.427	Mandrillus_leucophaeus
ENSODEG00000000235	Rnaseh1	82	80.658	ENSMLEG00000039352	-	100	80.658	Mandrillus_leucophaeus
ENSODEG00000000235	Rnaseh1	95	54.795	ENSMAMG00000019725	rnaseh1	95	57.353	Mastacembelus_armatus
ENSODEG00000000235	Rnaseh1	92	53.846	ENSMZEG00005013006	rnaseh1	91	54.545	Maylandia_zebra
ENSODEG00000000235	Rnaseh1	76	58.943	ENSMGAG00000013979	RNASEH1	98	58.943	Meleagris_gallopavo
ENSODEG00000000235	Rnaseh1	96	76.491	ENSMAUG00000014957	Rnaseh1	99	76.491	Mesocricetus_auratus
ENSODEG00000000235	Rnaseh1	96	82.332	ENSMICG00000033156	RNASEH1	98	82.332	Microcebus_murinus
ENSODEG00000000235	Rnaseh1	96	75.000	ENSMOCG00000015522	Rnaseh1	99	75.000	Microtus_ochrogaster
ENSODEG00000000235	Rnaseh1	95	52.759	ENSMMOG00000015902	rnaseh1	94	52.759	Mola_mola
ENSODEG00000000235	Rnaseh1	77	60.262	ENSMODG00000028814	-	93	60.262	Monodelphis_domestica
ENSODEG00000000235	Rnaseh1	88	74.427	ENSMODG00000014491	-	90	74.427	Monodelphis_domestica
ENSODEG00000000235	Rnaseh1	87	55.200	ENSMALG00000010565	rnaseh1	88	54.647	Monopterus_albus
ENSODEG00000000235	Rnaseh1	97	78.322	MGP_CAROLIEiJ_G0017660	Rnaseh1	100	78.322	Mus_caroli
ENSODEG00000000235	Rnaseh1	97	78.322	ENSMUSG00000020630	Rnaseh1	100	78.322	Mus_musculus
ENSODEG00000000235	Rnaseh1	96	77.193	MGP_PahariEiJ_G0029418	Rnaseh1	99	77.895	Mus_pahari
ENSODEG00000000235	Rnaseh1	97	78.671	MGP_SPRETEiJ_G0018502	Rnaseh1	100	78.671	Mus_spretus
ENSODEG00000000235	Rnaseh1	71	79.126	ENSMPUG00000012984	RNASEH1	99	79.126	Mustela_putorius_furo
ENSODEG00000000235	Rnaseh1	95	77.660	ENSNGAG00000015966	Rnaseh1	92	77.660	Nannospalax_galili
ENSODEG00000000235	Rnaseh1	92	54.196	ENSNBRG00000008739	rnaseh1	91	54.895	Neolamprologus_brichardi
ENSODEG00000000235	Rnaseh1	97	64.931	ENSNLEG00000015400	RNASEH1	100	64.931	Nomascus_leucogenys
ENSODEG00000000235	Rnaseh1	79	75.109	ENSNLEG00000000059	-	88	75.109	Nomascus_leucogenys
ENSODEG00000000235	Rnaseh1	93	48.736	ENSMEUG00000003610	-	97	48.736	Notamacropus_eugenii
ENSODEG00000000235	Rnaseh1	97	71.429	ENSOPRG00000005072	RNASEH1	99	71.429	Ochotona_princeps
ENSODEG00000000235	Rnaseh1	86	57.090	ENSONIG00000018697	rnaseh1	96	57.090	Oreochromis_niloticus
ENSODEG00000000235	Rnaseh1	97	76.573	ENSOCUG00000006117	RNASEH1	100	76.573	Oryctolagus_cuniculus
ENSODEG00000000235	Rnaseh1	86	58.687	ENSORLG00000018127	rnaseh1	94	58.687	Oryzias_latipes
ENSODEG00000000235	Rnaseh1	89	57.303	ENSORLG00020013660	rnaseh1	90	57.303	Oryzias_latipes_hni
ENSODEG00000000235	Rnaseh1	89	57.303	ENSORLG00015011338	rnaseh1	90	57.303	Oryzias_latipes_hsok
ENSODEG00000000235	Rnaseh1	85	52.734	ENSOMEG00000004710	rnaseh1	96	52.734	Oryzias_melastigma
ENSODEG00000000235	Rnaseh1	96	80.986	ENSOGAG00000017176	RNASEH1	99	80.986	Otolemur_garnettii
ENSODEG00000000235	Rnaseh1	96	66.207	ENSOARG00000005386	RNASEH1	99	66.207	Ovis_aries
ENSODEG00000000235	Rnaseh1	97	77.972	ENSPPAG00000034221	RNASEH1	100	77.972	Pan_paniscus
ENSODEG00000000235	Rnaseh1	97	77.352	ENSPPRG00000015513	RNASEH1	100	77.352	Panthera_pardus
ENSODEG00000000235	Rnaseh1	82	79.835	ENSPTIG00000019034	RNASEH1	85	79.835	Panthera_tigris_altaica
ENSODEG00000000235	Rnaseh1	97	77.972	ENSPTRG00000011614	RNASEH1	100	77.972	Pan_troglodytes
ENSODEG00000000235	Rnaseh1	81	73.469	ENSPTRG00000043403	-	93	73.469	Pan_troglodytes
ENSODEG00000000235	Rnaseh1	97	67.483	ENSPANG00000018246	-	100	67.483	Papio_anubis
ENSODEG00000000235	Rnaseh1	97	77.273	ENSPANG00000000443	RNASEH1	99	80.328	Papio_anubis
ENSODEG00000000235	Rnaseh1	85	51.311	ENSPKIG00000003146	rnaseh1	97	52.788	Paramormyrops_kingsleyae
ENSODEG00000000235	Rnaseh1	86	61.423	ENSPSIG00000002937	RNASEH1	98	61.423	Pelodiscus_sinensis
ENSODEG00000000235	Rnaseh1	94	53.091	ENSPMGG00000017463	rnaseh1	98	53.091	Periophthalmus_magnuspinnatus
ENSODEG00000000235	Rnaseh1	97	74.913	ENSPEMG00000022465	-	100	75.610	Peromyscus_maniculatus_bairdii
ENSODEG00000000235	Rnaseh1	88	70.992	ENSPCIG00000023334	-	90	70.992	Phascolarctos_cinereus
ENSODEG00000000235	Rnaseh1	51	42.953	ENSPCIG00000026047	-	83	43.537	Phascolarctos_cinereus
ENSODEG00000000235	Rnaseh1	86	58.271	ENSPFOG00000002841	rnaseh1	89	58.271	Poecilia_formosa
ENSODEG00000000235	Rnaseh1	62	54.011	ENSPLAG00000021349	-	74	54.011	Poecilia_latipinna
ENSODEG00000000235	Rnaseh1	86	58.271	ENSPMEG00000016826	rnaseh1	89	58.271	Poecilia_mexicana
ENSODEG00000000235	Rnaseh1	86	56.296	ENSPREG00000012197	rnaseh1	89	56.296	Poecilia_reticulata
ENSODEG00000000235	Rnaseh1	88	72.414	ENSPPYG00000008067	-	100	72.414	Pongo_abelii
ENSODEG00000000235	Rnaseh1	97	67.133	ENSPPYG00000025873	RNASEH1	100	67.133	Pongo_abelii
ENSODEG00000000235	Rnaseh1	96	72.535	ENSPCAG00000002500	RNASEH1	99	72.535	Procavia_capensis
ENSODEG00000000235	Rnaseh1	96	73.498	ENSPCOG00000019444	RNASEH1	98	73.498	Propithecus_coquereli
ENSODEG00000000235	Rnaseh1	96	73.333	ENSPVAG00000002070	RNASEH1	99	73.333	Pteropus_vampyrus
ENSODEG00000000235	Rnaseh1	92	53.497	ENSPNYG00000001292	rnaseh1	91	54.196	Pundamilia_nyererei
ENSODEG00000000235	Rnaseh1	93	57.194	ENSPNAG00000022344	rnaseh1	95	57.194	Pygocentrus_nattereri
ENSODEG00000000235	Rnaseh1	96	78.246	ENSRNOG00000008584	Rnaseh1	99	78.947	Rattus_norvegicus
ENSODEG00000000235	Rnaseh1	97	76.655	ENSRBIG00000034222	RNASEH1	99	76.655	Rhinopithecus_bieti
ENSODEG00000000235	Rnaseh1	97	76.655	ENSRROG00000041761	RNASEH1	99	76.655	Rhinopithecus_roxellana
ENSODEG00000000235	Rnaseh1	87	55.102	YMR234W	-	82	55.102	Saccharomyces_cerevisiae
ENSODEG00000000235	Rnaseh1	97	77.931	ENSSBOG00000025411	RNASEH1	100	77.931	Saimiri_boliviensis_boliviensis
ENSODEG00000000235	Rnaseh1	97	70.588	ENSSHAG00000013051	RNASEH1	97	70.588	Sarcophilus_harrisii
ENSODEG00000000235	Rnaseh1	94	51.095	ENSSFOG00015002709	rnaseh1	97	51.264	Scleropages_formosus
ENSODEG00000000235	Rnaseh1	86	57.519	ENSSMAG00000007586	rnaseh1	87	57.519	Scophthalmus_maximus
ENSODEG00000000235	Rnaseh1	92	52.297	ENSSDUG00000008217	rnaseh1	93	54.717	Seriola_dumerili
ENSODEG00000000235	Rnaseh1	84	53.333	ENSSLDG00000000442	rnaseh1	93	55.823	Seriola_lalandi_dorsalis
ENSODEG00000000235	Rnaseh1	86	60.377	ENSSPUG00000006644	RNASEH1	92	60.377	Sphenodon_punctatus
ENSODEG00000000235	Rnaseh1	95	53.716	ENSSPAG00000009353	rnaseh1	96	54.054	Stegastes_partitus
ENSODEG00000000235	Rnaseh1	89	77.947	ENSSSCG00000025305	RNASEH1	99	74.296	Sus_scrofa
ENSODEG00000000235	Rnaseh1	96	55.592	ENSTGUG00000012980	RNASEH1	99	55.229	Taeniopygia_guttata
ENSODEG00000000235	Rnaseh1	96	54.576	ENSTRUG00000015774	rnaseh1	97	56.044	Takifugu_rubripes
ENSODEG00000000235	Rnaseh1	88	56.250	ENSTNIG00000010715	rnaseh1	97	56.250	Tetraodon_nigroviridis
ENSODEG00000000235	Rnaseh1	97	72.125	ENSTTRG00000001615	RNASEH1	100	72.125	Tursiops_truncatus
ENSODEG00000000235	Rnaseh1	53	88.961	ENSUAMG00000018254	RNASEH1	80	88.961	Ursus_americanus
ENSODEG00000000235	Rnaseh1	66	77.665	ENSUMAG00000003941	RNASEH1	65	77.665	Ursus_maritimus
ENSODEG00000000235	Rnaseh1	96	64.311	ENSVPAG00000011589	RNASEH1	99	64.311	Vicugna_pacos
ENSODEG00000000235	Rnaseh1	97	79.094	ENSVVUG00000008633	RNASEH1	90	79.094	Vulpes_vulpes
ENSODEG00000000235	Rnaseh1	87	56.929	ENSXETG00000001212	rnaseh1	91	56.929	Xenopus_tropicalis
ENSODEG00000000235	Rnaseh1	87	46.000	ENSXETG00000030371	-	100	46.000	Xenopus_tropicalis
ENSODEG00000000235	Rnaseh1	86	55.263	ENSXMAG00000002357	rnaseh1	89	55.263	Xiphophorus_maculatus