EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000000280 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 973 bases
Position: chrJH651826.1:1174041-1175013
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000000315	Nup35_RRM	PF05172.13	8.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000000333	-	801	-	ENSODEP00000000315	266 (aa)	-	-

Gene Model

Click here to download ENSODEG00000000280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000000280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000000280	-	99	69.846	ENSODEG00000011202	-	99	69.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000000280	-	99	69.538	ENSG00000163002	NUP35	100	73.276	Homo_sapiens
ENSODEG00000000280	-	95	42.308	ENSAPOG00000003630	nup35	98	43.269	Acanthochromis_polyacanthus
ENSODEG00000000280	-	99	68.502	ENSAMEG00000001191	NUP35	99	68.502	Ailuropoda_melanoleuca
ENSODEG00000000280	-	82	45.490	ENSACIG00000023984	nup35	97	46.275	Amphilophus_citrinellus
ENSODEG00000000280	-	95	42.628	ENSAOCG00000007484	nup35	98	43.590	Amphiprion_ocellaris
ENSODEG00000000280	-	95	42.628	ENSAPEG00000020027	nup35	98	43.590	Amphiprion_percula
ENSODEG00000000280	-	95	43.087	ENSATEG00000019305	nup35	98	43.408	Anabas_testudineus
ENSODEG00000000280	-	98	60.748	ENSAPLG00000009161	NUP35	98	60.748	Anas_platyrhynchos
ENSODEG00000000280	-	99	57.538	ENSACAG00000008692	NUP35	99	57.538	Anolis_carolinensis
ENSODEG00000000280	-	99	68.923	ENSANAG00000021090	NUP35	99	68.923	Aotus_nancymaae
ENSODEG00000000280	-	95	42.857	ENSACLG00000013918	nup35	98	42.857	Astatotilapia_calliptera
ENSODEG00000000280	-	95	53.846	ENSAMXG00000003371	nup35	99	53.595	Astyanax_mexicanus
ENSODEG00000000280	-	99	68.308	ENSBTAG00000009777	NUP35	99	68.308	Bos_taurus
ENSODEG00000000280	-	99	69.846	ENSCJAG00000011104	NUP35	99	69.846	Callithrix_jacchus
ENSODEG00000000280	-	93	68.065	ENSCAFG00000031849	NUP35	99	68.065	Canis_familiaris
ENSODEG00000000280	-	99	68.196	ENSCAFG00020008408	NUP35	99	68.196	Canis_lupus_dingo
ENSODEG00000000280	-	93	68.182	ENSCHIG00000023148	NUP35	99	68.182	Capra_hircus
ENSODEG00000000280	-	99	66.769	ENSTSYG00000002117	NUP35	99	66.769	Carlito_syrichta
ENSODEG00000000280	-	99	54.434	ENSCAPG00000005703	NUP35	99	54.434	Cavia_aperea
ENSODEG00000000280	-	99	68.923	ENSCPOG00000011906	NUP35	99	68.923	Cavia_porcellus
ENSODEG00000000280	-	99	69.846	ENSCCAG00000025009	NUP35	99	69.846	Cebus_capucinus
ENSODEG00000000280	-	99	72.318	ENSCATG00000033109	NUP35	99	72.318	Cercocebus_atys
ENSODEG00000000280	-	99	68.615	ENSCLAG00000012559	NUP35	99	68.615	Chinchilla_lanigera
ENSODEG00000000280	-	99	69.231	ENSCSAG00000012620	NUP35	99	69.231	Chlorocebus_sabaeus
ENSODEG00000000280	-	99	61.231	ENSCPBG00000001303	NUP35	99	61.231	Chrysemys_picta_bellii
ENSODEG00000000280	-	81	33.208	ENSCING00000009659	-	78	33.208	Ciona_intestinalis
ENSODEG00000000280	-	77	36.800	ENSCSAVG00000007467	-	72	36.800	Ciona_savignyi
ENSODEG00000000280	-	99	69.231	ENSCANG00000030785	NUP35	99	69.231	Colobus_angolensis_palliatus
ENSODEG00000000280	-	99	68.923	ENSCGRG00001018638	-	99	68.923	Cricetulus_griseus_chok1gshd
ENSODEG00000000280	-	99	68.923	ENSCGRG00000011313	-	99	68.923	Cricetulus_griseus_crigri
ENSODEG00000000280	-	95	43.421	ENSCSEG00000000938	nup35	98	43.421	Cynoglossus_semilaevis
ENSODEG00000000280	-	95	43.770	ENSCVAG00000001792	nup35	98	43.770	Cyprinodon_variegatus
ENSODEG00000000280	-	94	51.974	ENSDARG00000012222	nup35	99	51.656	Danio_rerio
ENSODEG00000000280	-	99	67.692	ENSDNOG00000038754	-	99	67.692	Dasypus_novemcinctus
ENSODEG00000000280	-	99	68.308	ENSDNOG00000009513	-	88	68.308	Dasypus_novemcinctus
ENSODEG00000000280	-	99	67.385	ENSDORG00000010458	-	99	67.385	Dipodomys_ordii
ENSODEG00000000280	-	94	67.846	ENSETEG00000005896	NUP35	99	67.846	Echinops_telfairi
ENSODEG00000000280	-	95	39.506	ENSEBUG00000013034	nup35	98	40.123	Eptatretus_burgeri
ENSODEG00000000280	-	99	68.308	ENSEASG00005022100	NUP35	99	68.308	Equus_asinus_asinus
ENSODEG00000000280	-	99	68.308	ENSECAG00000003968	NUP35	99	68.308	Equus_caballus
ENSODEG00000000280	-	99	63.077	ENSEEUG00000008469	NUP35	99	63.077	Erinaceus_europaeus
ENSODEG00000000280	-	95	53.094	ENSELUG00000013693	nup35	99	52.805	Esox_lucius
ENSODEG00000000280	-	99	68.502	ENSFCAG00000025636	NUP35	99	68.502	Felis_catus
ENSODEG00000000280	-	99	58.589	ENSFALG00000013175	NUP35	99	58.589	Ficedula_albicollis
ENSODEG00000000280	-	99	68.615	ENSFDAG00000017998	NUP35	99	68.615	Fukomys_damarensis
ENSODEG00000000280	-	95	42.949	ENSFHEG00000010229	nup35	98	43.910	Fundulus_heteroclitus
ENSODEG00000000280	-	81	44.068	ENSGMOG00000003337	nup35	99	44.068	Gadus_morhua
ENSODEG00000000280	-	99	60.615	ENSGALG00000002689	NUP35	99	60.615	Gallus_gallus
ENSODEG00000000280	-	95	42.857	ENSGAFG00000022048	nup35	98	43.492	Gambusia_affinis
ENSODEG00000000280	-	95	44.781	ENSGACG00000008203	nup35	98	45.118	Gasterosteus_aculeatus
ENSODEG00000000280	-	93	61.489	ENSGAGG00000001967	NUP35	99	61.489	Gopherus_agassizii
ENSODEG00000000280	-	99	69.538	ENSGGOG00000009919	NUP35	99	69.538	Gorilla_gorilla
ENSODEG00000000280	-	99	69.231	ENSHGLG00000013230	NUP35	99	69.231	Heterocephalus_glaber_female
ENSODEG00000000280	-	95	67.491	ENSHGLG00000000414	-	96	67.491	Heterocephalus_glaber_female
ENSODEG00000000280	-	96	60.065	ENSHGLG00000008616	-	96	60.714	Heterocephalus_glaber_female
ENSODEG00000000280	-	96	60.065	ENSHGLG00100000091	-	96	60.714	Heterocephalus_glaber_male
ENSODEG00000000280	-	99	69.231	ENSHGLG00100012840	NUP35	99	69.231	Heterocephalus_glaber_male
ENSODEG00000000280	-	95	67.491	ENSHGLG00100010869	-	96	67.491	Heterocephalus_glaber_male
ENSODEG00000000280	-	95	42.812	ENSHCOG00000003882	nup35	98	42.812	Hippocampus_comes
ENSODEG00000000280	-	99	46.933	ENSIPUG00000002798	nup35	99	46.933	Ictalurus_punctatus
ENSODEG00000000280	-	99	68.000	ENSSTOG00000000711	NUP35	99	68.000	Ictidomys_tridecemlineatus
ENSODEG00000000280	-	82	61.733	ENSJJAG00000006387	-	93	61.733	Jaculus_jaculus
ENSODEG00000000280	-	99	67.692	ENSJJAG00000016432	-	99	67.692	Jaculus_jaculus
ENSODEG00000000280	-	98	61.801	ENSJJAG00000017434	-	98	61.801	Jaculus_jaculus
ENSODEG00000000280	-	99	57.276	ENSJJAG00000007003	-	98	57.276	Jaculus_jaculus
ENSODEG00000000280	-	95	40.952	ENSKMAG00000011162	nup35	98	42.857	Kryptolebias_marmoratus
ENSODEG00000000280	-	95	45.290	ENSLBEG00000012416	nup35	98	45.290	Labrus_bergylta
ENSODEG00000000280	-	93	55.987	ENSLACG00000008247	NUP35	99	55.987	Latimeria_chalumnae
ENSODEG00000000280	-	95	49.196	ENSLOCG00000006726	nup35	98	49.359	Lepisosteus_oculatus
ENSODEG00000000280	-	99	67.576	ENSLAFG00000008155	NUP35	99	67.576	Loxodonta_africana
ENSODEG00000000280	-	99	69.304	ENSMFAG00000000834	NUP35	99	69.304	Macaca_fascicularis
ENSODEG00000000280	-	99	69.231	ENSMMUG00000004140	NUP35	99	69.231	Macaca_mulatta
ENSODEG00000000280	-	99	69.231	ENSMNEG00000029014	NUP35	99	69.231	Macaca_nemestrina
ENSODEG00000000280	-	99	69.231	ENSMLEG00000035422	NUP35	99	69.231	Mandrillus_leucophaeus
ENSODEG00000000280	-	95	42.812	ENSMAMG00000013232	nup35	98	43.131	Mastacembelus_armatus
ENSODEG00000000280	-	95	43.689	ENSMZEG00005020619	nup35	94	43.689	Maylandia_zebra
ENSODEG00000000280	-	93	59.091	ENSMGAG00000004412	NUP35	94	59.091	Meleagris_gallopavo
ENSODEG00000000280	-	99	69.538	ENSMAUG00000013776	-	99	69.538	Mesocricetus_auratus
ENSODEG00000000280	-	99	68.308	ENSMICG00000006790	NUP35	99	68.308	Microcebus_murinus
ENSODEG00000000280	-	99	67.692	ENSMOCG00000014754	-	99	67.692	Microtus_ochrogaster
ENSODEG00000000280	-	96	42.071	ENSMMOG00000005026	nup35	99	42.071	Mola_mola
ENSODEG00000000280	-	99	63.692	ENSMODG00000010578	NUP35	99	63.692	Monodelphis_domestica
ENSODEG00000000280	-	95	43.408	ENSMALG00000020187	nup35	98	43.408	Monopterus_albus
ENSODEG00000000280	-	99	66.769	MGP_CAROLIEiJ_G0023709	-	99	66.769	Mus_caroli
ENSODEG00000000280	-	99	66.462	ENSMUSG00000026999	Nup35	99	66.462	Mus_musculus
ENSODEG00000000280	-	99	67.692	MGP_PahariEiJ_G0025160	-	99	67.692	Mus_pahari
ENSODEG00000000280	-	85	60.201	MGP_SPRETEiJ_G0033063	-	99	60.201	Mus_spretus
ENSODEG00000000280	-	99	68.807	ENSMPUG00000002063	NUP35	99	68.807	Mustela_putorius_furo
ENSODEG00000000280	-	99	68.000	ENSMLUG00000013154	NUP35	99	68.000	Myotis_lucifugus
ENSODEG00000000280	-	99	68.308	ENSNGAG00000012107	-	99	68.308	Nannospalax_galili
ENSODEG00000000280	-	95	43.648	ENSNBRG00000020466	nup35	96	44.625	Neolamprologus_brichardi
ENSODEG00000000280	-	99	69.538	ENSNLEG00000035026	NUP35	99	69.538	Nomascus_leucogenys
ENSODEG00000000280	-	65	43.128	ENSMEUG00000003001	-	65	43.128	Notamacropus_eugenii
ENSODEG00000000280	-	81	71.260	ENSOPRG00000016609	NUP35	78	71.260	Ochotona_princeps
ENSODEG00000000280	-	95	43.354	ENSONIG00000016251	nup35	98	43.354	Oreochromis_niloticus
ENSODEG00000000280	-	66	59.322	ENSOANG00000006793	-	97	59.322	Ornithorhynchus_anatinus
ENSODEG00000000280	-	99	69.231	ENSOCUG00000014407	NUP35	99	69.231	Oryctolagus_cuniculus
ENSODEG00000000280	-	95	42.994	ENSORLG00000013588	nup35	99	42.997	Oryzias_latipes
ENSODEG00000000280	-	95	42.994	ENSORLG00020008201	nup35	98	42.994	Oryzias_latipes_hni
ENSODEG00000000280	-	95	42.994	ENSORLG00015011096	nup35	99	42.997	Oryzias_latipes_hsok
ENSODEG00000000280	-	95	42.357	ENSOMEG00000007628	nup35	98	42.357	Oryzias_melastigma
ENSODEG00000000280	-	99	67.692	ENSOGAG00000011920	NUP35	99	67.692	Otolemur_garnettii
ENSODEG00000000280	-	99	68.615	ENSOARG00000016728	NUP35	99	68.615	Ovis_aries
ENSODEG00000000280	-	99	69.538	ENSPPAG00000036316	NUP35	99	69.538	Pan_paniscus
ENSODEG00000000280	-	99	68.502	ENSPPRG00000024726	NUP35	99	68.502	Panthera_pardus
ENSODEG00000000280	-	99	68.807	ENSPTIG00000017299	NUP35	99	68.807	Panthera_tigris_altaica
ENSODEG00000000280	-	99	69.538	ENSPTRG00000012711	NUP35	99	69.538	Pan_troglodytes
ENSODEG00000000280	-	99	69.231	ENSPANG00000013686	NUP35	99	69.231	Papio_anubis
ENSODEG00000000280	-	94	51.948	ENSPKIG00000022051	nup35	98	52.273	Paramormyrops_kingsleyae
ENSODEG00000000280	-	93	60.714	ENSPSIG00000002146	NUP35	99	60.714	Pelodiscus_sinensis
ENSODEG00000000280	-	94	41.584	ENSPMGG00000022915	nup35	99	40.439	Periophthalmus_magnuspinnatus
ENSODEG00000000280	-	99	69.231	ENSPEMG00000014718	-	99	69.231	Peromyscus_maniculatus_bairdii
ENSODEG00000000280	-	95	39.450	ENSPMAG00000006604	nup35	97	39.450	Petromyzon_marinus
ENSODEG00000000280	-	99	64.615	ENSPCIG00000015482	NUP35	99	64.615	Phascolarctos_cinereus
ENSODEG00000000280	-	95	43.175	ENSPFOG00000010020	nup35	98	43.810	Poecilia_formosa
ENSODEG00000000280	-	95	42.857	ENSPLAG00000005867	nup35	98	43.492	Poecilia_latipinna
ENSODEG00000000280	-	95	44.194	ENSPMEG00000010552	nup35	98	44.839	Poecilia_mexicana
ENSODEG00000000280	-	95	43.854	ENSPREG00000021005	nup35	98	44.518	Poecilia_reticulata
ENSODEG00000000280	-	99	69.231	ENSPPYG00000012998	-	79	69.231	Pongo_abelii
ENSODEG00000000280	-	94	41.801	ENSPCAG00000000605	NUP35	95	41.801	Procavia_capensis
ENSODEG00000000280	-	99	68.615	ENSPCOG00000024097	NUP35	99	68.615	Propithecus_coquereli
ENSODEG00000000280	-	99	69.231	ENSPVAG00000015908	NUP35	99	69.231	Pteropus_vampyrus
ENSODEG00000000280	-	95	44.013	ENSPNYG00000012486	nup35	94	44.013	Pundamilia_nyererei
ENSODEG00000000280	-	95	53.226	ENSPNAG00000005181	nup35	97	53.226	Pygocentrus_nattereri
ENSODEG00000000280	-	99	68.000	ENSRNOG00000009290	Nup35	99	68.000	Rattus_norvegicus
ENSODEG00000000280	-	99	69.231	ENSRBIG00000039427	NUP35	99	69.231	Rhinopithecus_bieti
ENSODEG00000000280	-	99	68.923	ENSRROG00000026525	NUP35	99	68.923	Rhinopithecus_roxellana
ENSODEG00000000280	-	99	69.538	ENSSBOG00000018676	NUP35	99	69.538	Saimiri_boliviensis_boliviensis
ENSODEG00000000280	-	99	64.615	ENSSHAG00000009746	NUP35	99	64.615	Sarcophilus_harrisii
ENSODEG00000000280	-	95	51.768	ENSSFOG00015002390	nup35	98	51.768	Scleropages_formosus
ENSODEG00000000280	-	95	42.949	ENSSMAG00000015651	nup35	98	42.949	Scophthalmus_maximus
ENSODEG00000000280	-	98	41.534	ENSSDUG00000013118	nup35	98	43.042	Seriola_dumerili
ENSODEG00000000280	-	95	42.208	ENSSLDG00000018249	nup35	98	43.182	Seriola_lalandi_dorsalis
ENSODEG00000000280	-	94	46.774	ENSSARG00000001535	-	99	46.774	Sorex_araneus
ENSODEG00000000280	-	99	59.692	ENSSPUG00000018651	NUP35	99	59.692	Sphenodon_punctatus
ENSODEG00000000280	-	99	42.633	ENSSPAG00000018264	nup35	99	43.260	Stegastes_partitus
ENSODEG00000000280	-	99	69.538	ENSSSCG00000028949	NUP35	99	69.538	Sus_scrofa
ENSODEG00000000280	-	99	58.104	ENSTGUG00000011278	NUP35	99	58.104	Taeniopygia_guttata
ENSODEG00000000280	-	88	38.095	ENSTRUG00000014111	nup35	99	38.095	Takifugu_rubripes
ENSODEG00000000280	-	95	37.201	ENSTNIG00000011568	nup35	95	37.201	Tetraodon_nigroviridis
ENSODEG00000000280	-	99	64.506	ENSTBEG00000003328	NUP35	99	64.506	Tupaia_belangeri
ENSODEG00000000280	-	99	71.626	ENSTTRG00000002512	NUP35	99	71.626	Tursiops_truncatus
ENSODEG00000000280	-	58	65.625	ENSUAMG00000018696	-	93	65.625	Ursus_americanus
ENSODEG00000000280	-	92	66.993	ENSUMAG00000017104	NUP35	100	66.993	Ursus_maritimus
ENSODEG00000000280	-	99	68.308	ENSVPAG00000011898	NUP35	99	68.308	Vicugna_pacos
ENSODEG00000000280	-	99	62.712	ENSVVUG00000016832	NUP35	99	67.742	Vulpes_vulpes
ENSODEG00000000280	-	99	50.779	ENSXETG00000001335	nup35	99	50.779	Xenopus_tropicalis
ENSODEG00000000280	-	95	43.175	ENSXMAG00000000409	nup35	98	43.810	Xiphophorus_maculatus