EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000000542 (Gene tree)
Gene ID: 101562307
Gene Symbol: -
Alias: -
Full Name: TSR2%2C ribosome maturation factor
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 3653 bases
Position: chrJH651829.1:1231468-1235120
Accession: 101562307
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000000646	WGG	PF10273.9	2.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000000669	-	573	XM_004647584	ENSODEP00000000646	190 (aa)	XP_004647642	-

Gene Model

Click here to download ENSODEG00000000542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000000542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000000542	-	92	90.857	ENSODEG00000019951	-	100	90.857
ENSODEG00000000542	-	95	95.556	ENSODEG00000014931	-	99	95.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000000542	-	99	83.505	ENSG00000158526	TSR2	100	83.505	Homo_sapiens
ENSODEG00000000542	-	94	42.778	ENSAPOG00000004150	-	94	42.778	Acanthochromis_polyacanthus
ENSODEG00000000542	-	99	80.105	ENSAMEG00000002469	TSR2	100	80.105	Ailuropoda_melanoleuca
ENSODEG00000000542	-	75	52.083	ENSACIG00000004880	tsr2	98	52.083	Amphilophus_citrinellus
ENSODEG00000000542	-	98	47.340	ENSAOCG00000015893	tsr2	96	47.340	Amphiprion_ocellaris
ENSODEG00000000542	-	98	45.745	ENSAPEG00000023549	tsr2	97	47.644	Amphiprion_percula
ENSODEG00000000542	-	98	46.524	ENSATEG00000019009	-	97	47.253	Anabas_testudineus
ENSODEG00000000542	-	99	48.677	ENSACAG00000012270	TSR2	100	48.731	Anolis_carolinensis
ENSODEG00000000542	-	99	82.474	ENSANAG00000000062	TSR2	100	82.474	Aotus_nancymaae
ENSODEG00000000542	-	96	46.154	ENSACLG00000014269	tsr2	97	46.154	Astatotilapia_calliptera
ENSODEG00000000542	-	99	47.692	ENSAMXG00000016817	tsr2	89	49.479	Astyanax_mexicanus
ENSODEG00000000542	-	100	79.487	ENSBTAG00000015858	TSR2	100	79.487	Bos_taurus
ENSODEG00000000542	-	93	68.715	ENSBTAG00000018311	-	97	68.715	Bos_taurus
ENSODEG00000000542	-	99	81.959	ENSCJAG00000000251	TSR2	100	81.959	Callithrix_jacchus
ENSODEG00000000542	-	99	81.443	ENSCAFG00000016440	TSR2	100	81.443	Canis_familiaris
ENSODEG00000000542	-	99	81.443	ENSCAFG00020014044	TSR2	100	81.443	Canis_lupus_dingo
ENSODEG00000000542	-	94	65.934	ENSCHIG00000009963	-	92	67.039	Capra_hircus
ENSODEG00000000542	-	99	78.534	ENSTSYG00000005670	-	100	78.534	Carlito_syrichta
ENSODEG00000000542	-	99	69.072	ENSTSYG00000031321	-	100	69.072	Carlito_syrichta
ENSODEG00000000542	-	94	70.652	ENSTSYG00000031644	-	99	70.652	Carlito_syrichta
ENSODEG00000000542	-	100	87.368	ENSCPOG00000033139	TSR2	100	87.368	Cavia_porcellus
ENSODEG00000000542	-	99	81.443	ENSCCAG00000025421	TSR2	100	81.443	Cebus_capucinus
ENSODEG00000000542	-	99	82.990	ENSCATG00000036868	-	100	82.990	Cercocebus_atys
ENSODEG00000000542	-	100	80.000	ENSCATG00000045152	-	100	80.000	Cercocebus_atys
ENSODEG00000000542	-	100	91.053	ENSCLAG00000007235	TSR2	100	91.053	Chinchilla_lanigera
ENSODEG00000000542	-	99	79.381	ENSCSAG00000000402	-	100	79.381	Chlorocebus_sabaeus
ENSODEG00000000542	-	96	80.319	ENSCSAG00000012366	-	97	80.319	Chlorocebus_sabaeus
ENSODEG00000000542	-	99	84.021	ENSCHOG00000001068	TSR2	100	84.021	Choloepus_hoffmanni
ENSODEG00000000542	-	96	32.275	ENSCING00000002386	-	96	32.275	Ciona_intestinalis
ENSODEG00000000542	-	95	31.720	ENSCSAVG00000009298	-	95	31.720	Ciona_savignyi
ENSODEG00000000542	-	99	72.165	ENSCANG00000036773	-	97	72.165	Colobus_angolensis_palliatus
ENSODEG00000000542	-	99	82.990	ENSCANG00000043156	-	100	82.990	Colobus_angolensis_palliatus
ENSODEG00000000542	-	100	73.958	ENSCGRG00001023321	Tsr2	100	73.958	Cricetulus_griseus_chok1gshd
ENSODEG00000000542	-	100	74.359	ENSCGRG00000010855	Tsr2	100	74.359	Cricetulus_griseus_crigri
ENSODEG00000000542	-	99	42.932	ENSCSEG00000017003	tsr2	99	43.455	Cynoglossus_semilaevis
ENSODEG00000000542	-	98	44.920	ENSCVAG00000001845	tsr2	99	44.920	Cyprinodon_variegatus
ENSODEG00000000542	-	99	45.503	ENSDARG00000005772	tsr2	98	53.782	Danio_rerio
ENSODEG00000000542	-	100	80.729	ENSDORG00000025574	Tsr2	100	80.729	Dipodomys_ordii
ENSODEG00000000542	-	99	80.729	ENSETEG00000018510	TSR2	100	82.051	Echinops_telfairi
ENSODEG00000000542	-	96	38.503	ENSEBUG00000012895	tsr2	93	38.462	Eptatretus_burgeri
ENSODEG00000000542	-	100	83.333	ENSEASG00005013005	TSR2	100	83.333	Equus_asinus_asinus
ENSODEG00000000542	-	100	82.812	ENSECAG00000029844	TSR2	86	82.812	Equus_caballus
ENSODEG00000000542	-	98	43.085	ENSELUG00000007768	tsr2	97	44.865	Esox_lucius
ENSODEG00000000542	-	99	82.474	ENSFCAG00000002226	TSR2	100	82.474	Felis_catus
ENSODEG00000000542	-	100	86.316	ENSFDAG00000011554	TSR2	100	86.316	Fukomys_damarensis
ENSODEG00000000542	-	96	42.308	ENSGACG00000000595	tsr2	97	42.308	Gasterosteus_aculeatus
ENSODEG00000000542	-	64	57.377	ENSGAGG00000007629	TSR2	98	44.324	Gopherus_agassizii
ENSODEG00000000542	-	99	83.505	ENSGGOG00000041368	TSR2	100	83.505	Gorilla_gorilla
ENSODEG00000000542	-	98	45.455	ENSHBUG00000020989	tsr2	80	45.503	Haplochromis_burtoni
ENSODEG00000000542	-	100	86.842	ENSHGLG00000002188	TSR2	100	86.842	Heterocephalus_glaber_female
ENSODEG00000000542	-	100	86.842	ENSHGLG00100001234	TSR2	100	86.842	Heterocephalus_glaber_male
ENSODEG00000000542	-	75	49.306	ENSHCOG00000017585	-	67	49.306	Hippocampus_comes
ENSODEG00000000542	-	99	45.641	ENSIPUG00000012170	tsr2	100	45.641	Ictalurus_punctatus
ENSODEG00000000542	-	100	83.077	ENSSTOG00000033612	TSR2	100	83.077	Ictidomys_tridecemlineatus
ENSODEG00000000542	-	99	75.258	ENSJJAG00000004561	Tsr2	99	75.258	Jaculus_jaculus
ENSODEG00000000542	-	96	48.370	ENSKMAG00000012611	-	97	48.370	Kryptolebias_marmoratus
ENSODEG00000000542	-	65	52.800	ENSLBEG00000017316	tsr2	58	49.645	Labrus_bergylta
ENSODEG00000000542	-	100	80.208	ENSLAFG00000018093	TSR2	100	80.208	Loxodonta_africana
ENSODEG00000000542	-	99	82.990	ENSMFAG00000001364	TSR2	100	82.990	Macaca_fascicularis
ENSODEG00000000542	-	99	79.897	ENSMMUG00000010044	-	100	79.897	Macaca_mulatta
ENSODEG00000000542	-	99	82.990	ENSMMUG00000012612	TSR2	100	82.990	Macaca_mulatta
ENSODEG00000000542	-	99	82.990	ENSMNEG00000041996	TSR2	100	82.990	Macaca_nemestrina
ENSODEG00000000542	-	99	82.990	ENSMLEG00000032632	TSR2	100	82.990	Mandrillus_leucophaeus
ENSODEG00000000542	-	98	44.149	ENSMAMG00000011540	tsr2	100	45.263	Mastacembelus_armatus
ENSODEG00000000542	-	96	46.154	ENSMZEG00005026752	tsr2	97	46.154	Maylandia_zebra
ENSODEG00000000542	-	100	77.949	ENSMAUG00000012389	Tsr2	100	77.949	Mesocricetus_auratus
ENSODEG00000000542	-	100	81.538	ENSMICG00000010116	TSR2	100	81.538	Microcebus_murinus
ENSODEG00000000542	-	100	72.821	ENSMOCG00000006662	Tsr2	100	72.821	Microtus_ochrogaster
ENSODEG00000000542	-	98	38.503	ENSMMOG00000009751	-	99	38.503	Mola_mola
ENSODEG00000000542	-	99	42.929	ENSMODG00000020894	-	100	42.929	Monodelphis_domestica
ENSODEG00000000542	-	96	45.604	ENSMALG00000014552	tsr2	96	45.604	Monopterus_albus
ENSODEG00000000542	-	100	77.949	MGP_CAROLIEiJ_G0033491	Tsr2	100	77.949	Mus_caroli
ENSODEG00000000542	-	100	77.949	ENSMUSG00000025264	Tsr2	100	77.949	Mus_musculus
ENSODEG00000000542	-	100	76.923	MGP_PahariEiJ_G0032030	Tsr2	100	76.923	Mus_pahari
ENSODEG00000000542	-	100	77.949	MGP_SPRETEiJ_G0034661	Tsr2	100	77.949	Mus_spretus
ENSODEG00000000542	-	99	81.959	ENSMPUG00000011436	TSR2	100	81.959	Mustela_putorius_furo
ENSODEG00000000542	-	97	74.737	ENSMLUG00000010613	TSR2	97	74.737	Myotis_lucifugus
ENSODEG00000000542	-	100	76.410	ENSNGAG00000021351	Tsr2	100	76.410	Nannospalax_galili
ENSODEG00000000542	-	96	45.604	ENSNBRG00000007965	tsr2	97	45.604	Neolamprologus_brichardi
ENSODEG00000000542	-	99	83.505	ENSNLEG00000030041	TSR2	100	83.505	Nomascus_leucogenys
ENSODEG00000000542	-	58	52.252	ENSMEUG00000006729	-	100	50.000	Notamacropus_eugenii
ENSODEG00000000542	-	67	79.528	ENSOPRG00000016595	TSR2	100	79.528	Ochotona_princeps
ENSODEG00000000542	-	100	45.789	ENSONIG00000000763	tsr2	100	45.789	Oreochromis_niloticus
ENSODEG00000000542	-	69	70.455	ENSOANG00000000707	TSR2	93	70.455	Ornithorhynchus_anatinus
ENSODEG00000000542	-	99	82.474	ENSOCUG00000027678	-	100	82.474	Oryctolagus_cuniculus
ENSODEG00000000542	-	86	78.107	ENSOCUG00000014714	-	100	78.107	Oryctolagus_cuniculus
ENSODEG00000000542	-	96	43.956	ENSORLG00000022662	tsr2	97	43.407	Oryzias_latipes
ENSODEG00000000542	-	96	43.956	ENSORLG00020003033	tsr2	97	43.956	Oryzias_latipes_hni
ENSODEG00000000542	-	96	43.407	ENSORLG00015017253	tsr2	97	43.407	Oryzias_latipes_hsok
ENSODEG00000000542	-	98	42.246	ENSOMEG00000011483	tsr2	99	42.246	Oryzias_melastigma
ENSODEG00000000542	-	98	43.316	ENSOMEG00000013975	-	99	42.246	Oryzias_melastigma
ENSODEG00000000542	-	99	78.534	ENSOGAG00000003468	TSR2	100	78.534	Otolemur_garnettii
ENSODEG00000000542	-	88	66.071	ENSOARG00000009487	-	94	66.071	Ovis_aries
ENSODEG00000000542	-	100	81.026	ENSOARG00000006467	-	100	81.026	Ovis_aries
ENSODEG00000000542	-	99	83.505	ENSPPAG00000021242	TSR2	100	83.505	Pan_paniscus
ENSODEG00000000542	-	99	82.474	ENSPPRG00000001337	TSR2	100	82.474	Panthera_pardus
ENSODEG00000000542	-	100	82.051	ENSPTIG00000007138	TSR2	100	82.051	Panthera_tigris_altaica
ENSODEG00000000542	-	99	83.505	ENSPTRG00000045904	TSR2	100	83.505	Pan_troglodytes
ENSODEG00000000542	-	95	79.459	ENSPANG00000002291	-	98	79.459	Papio_anubis
ENSODEG00000000542	-	99	82.990	ENSPANG00000008042	-	100	82.990	Papio_anubis
ENSODEG00000000542	-	99	41.451	ENSPKIG00000023676	tsr2	100	42.640	Paramormyrops_kingsleyae
ENSODEG00000000542	-	99	37.245	ENSPMGG00000002963	tsr2	100	40.741	Periophthalmus_magnuspinnatus
ENSODEG00000000542	-	100	75.000	ENSPEMG00000015713	Tsr2	100	75.000	Peromyscus_maniculatus_bairdii
ENSODEG00000000542	-	95	39.062	ENSPMAG00000001705	tsr2	92	40.625	Petromyzon_marinus
ENSODEG00000000542	-	99	50.000	ENSPCIG00000024314	-	95	50.000	Phascolarctos_cinereus
ENSODEG00000000542	-	96	44.624	ENSPFOG00000011824	tsr2	97	44.624	Poecilia_formosa
ENSODEG00000000542	-	98	44.920	ENSPLAG00000023520	tsr2	99	44.920	Poecilia_latipinna
ENSODEG00000000542	-	98	46.277	ENSPMEG00000000360	tsr2	99	46.277	Poecilia_mexicana
ENSODEG00000000542	-	98	45.989	ENSPREG00000013009	tsr2	99	45.989	Poecilia_reticulata
ENSODEG00000000542	-	100	83.077	ENSPPYG00000020381	-	72	83.077	Pongo_abelii
ENSODEG00000000542	-	99	81.443	ENSPCOG00000002354	TSR2	100	81.443	Propithecus_coquereli
ENSODEG00000000542	-	65	83.740	ENSPVAG00000000034	TSR2	100	83.740	Pteropus_vampyrus
ENSODEG00000000542	-	98	45.455	ENSPNYG00000019995	tsr2	80	45.503	Pundamilia_nyererei
ENSODEG00000000542	-	99	46.073	ENSPNAG00000024167	tsr2	100	47.668	Pygocentrus_nattereri
ENSODEG00000000542	-	100	77.604	ENSRNOG00000002556	NEWGENE_1562416	100	77.604	Rattus_norvegicus
ENSODEG00000000542	-	100	74.872	ENSRBIG00000003999	-	90	74.872	Rhinopithecus_bieti
ENSODEG00000000542	-	99	82.990	ENSRBIG00000024521	-	100	82.990	Rhinopithecus_bieti
ENSODEG00000000542	-	99	82.990	ENSRROG00000029439	-	100	82.990	Rhinopithecus_roxellana
ENSODEG00000000542	-	100	74.872	ENSRROG00000033469	-	93	74.872	Rhinopithecus_roxellana
ENSODEG00000000542	-	99	82.474	ENSSBOG00000019737	TSR2	100	82.474	Saimiri_boliviensis_boliviensis
ENSODEG00000000542	-	86	50.299	ENSSHAG00000004824	-	99	50.299	Sarcophilus_harrisii
ENSODEG00000000542	-	99	41.538	ENSSFOG00015002207	tsr2	96	43.386	Scleropages_formosus
ENSODEG00000000542	-	98	42.553	ENSSMAG00000012882	tsr2	100	44.560	Scophthalmus_maximus
ENSODEG00000000542	-	100	46.597	ENSSDUG00000019445	tsr2	100	46.392	Seriola_dumerili
ENSODEG00000000542	-	100	46.073	ENSSLDG00000005598	tsr2	100	46.667	Seriola_lalandi_dorsalis
ENSODEG00000000542	-	99	46.354	ENSSPUG00000019286	TSR2	99	47.396	Sphenodon_punctatus
ENSODEG00000000542	-	99	79.365	ENSSSCG00000012334	TSR2	100	79.365	Sus_scrofa
ENSODEG00000000542	-	96	43.716	ENSTRUG00000008947	tsr2	97	43.716	Takifugu_rubripes
ENSODEG00000000542	-	89	38.728	ENSTNIG00000002173	-	99	39.306	Tetraodon_nigroviridis
ENSODEG00000000542	-	69	85.496	ENSTBEG00000016242	TSR2	100	85.714	Tupaia_belangeri
ENSODEG00000000542	-	99	64.062	ENSTTRG00000003274	TSR2	100	64.062	Tursiops_truncatus
ENSODEG00000000542	-	99	80.412	ENSUAMG00000009605	TSR2	100	80.412	Ursus_americanus
ENSODEG00000000542	-	99	80.412	ENSUMAG00000019189	TSR2	100	80.412	Ursus_maritimus
ENSODEG00000000542	-	94	72.131	ENSVPAG00000007532	TSR2	100	72.131	Vicugna_pacos
ENSODEG00000000542	-	99	80.928	ENSVVUG00000002247	TSR2	99	80.928	Vulpes_vulpes
ENSODEG00000000542	-	99	44.503	ENSXETG00000033574	TSR2	99	45.026	Xenopus_tropicalis
ENSODEG00000000542	-	98	47.872	ENSXMAG00000024827	tsr2	90	47.872	Xiphophorus_maculatus