EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000000549 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 4796 bases
Position: chrJH651888.1:217208-222003
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000000656	TruB_N	PF01509.18	4.3e-20	1	1
ENSODEP00000000656	DKCLD	PF08068.12	1.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000000679	-	780	-	ENSODEP00000000656	260 (aa)	-	-

Gene Model

Click here to download ENSODEG00000000549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000000549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000000549	-	100	83.333	ENSODEG00000011816	-	59	83.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000000549	-	99	98.062	ENSG00000130826	DKC1	100	98.062	Homo_sapiens
ENSODEG00000000549	-	91	72.826	ENSAPOG00000007799	dkc1	54	72.826	Acanthochromis_polyacanthus
ENSODEG00000000549	-	100	84.333	ENSAMEG00000002776	DKC1	59	84.333	Ailuropoda_melanoleuca
ENSODEG00000000549	-	91	72.924	ENSACIG00000022614	dkc1	81	81.955	Amphilophus_citrinellus
ENSODEG00000000549	-	100	70.333	ENSAOCG00000013159	dkc1	57	72.302	Amphiprion_ocellaris
ENSODEG00000000549	-	100	70.333	ENSAPEG00000002284	dkc1	57	72.302	Amphiprion_percula
ENSODEG00000000549	-	92	69.930	ENSATEG00000013682	dkc1	56	69.930	Anabas_testudineus
ENSODEG00000000549	-	92	77.143	ENSACAG00000015600	DKC1	52	75.667	Anolis_carolinensis
ENSODEG00000000549	-	100	84.000	ENSANAG00000022732	DKC1	55	96.698	Aotus_nancymaae
ENSODEG00000000549	-	92	72.401	ENSACLG00000015605	dkc1	57	72.401	Astatotilapia_calliptera
ENSODEG00000000549	-	92	72.043	ENSAMXG00000017108	dkc1	55	72.043	Astyanax_mexicanus
ENSODEG00000000549	-	100	84.667	ENSBTAG00000013045	DKC1	59	84.667	Bos_taurus
ENSODEG00000000549	-	95	57.343	WBGene00010478	K01G5.5	63	57.706	Caenorhabditis_elegans
ENSODEG00000000549	-	100	84.667	ENSCJAG00000004210	DKC1	67	97.170	Callithrix_jacchus
ENSODEG00000000549	-	100	70.333	ENSCAFG00000009311	-	58	70.667	Canis_familiaris
ENSODEG00000000549	-	100	85.333	ENSCAFG00000019620	-	58	85.333	Canis_familiaris
ENSODEG00000000549	-	100	69.000	ENSCAFG00020009379	-	56	69.333	Canis_lupus_dingo
ENSODEG00000000549	-	100	85.333	ENSCAFG00020008918	-	58	85.333	Canis_lupus_dingo
ENSODEG00000000549	-	100	85.000	ENSCHIG00000017392	DKC1	59	85.000	Capra_hircus
ENSODEG00000000549	-	99	84.512	ENSTSYG00000007681	DKC1	57	84.512	Carlito_syrichta
ENSODEG00000000549	-	82	80.709	ENSCAPG00000003342	DKC1	55	83.539	Cavia_aperea
ENSODEG00000000549	-	100	86.000	ENSCPOG00000008825	DKC1	58	86.000	Cavia_porcellus
ENSODEG00000000549	-	100	96.154	ENSCCAG00000027418	DKC1	54	96.154	Cebus_capucinus
ENSODEG00000000549	-	100	85.000	ENSCATG00000033602	DKC1	58	85.000	Cercocebus_atys
ENSODEG00000000549	-	98	85.714	ENSCLAG00000000720	DKC1	58	85.714	Chinchilla_lanigera
ENSODEG00000000549	-	100	85.000	ENSCSAG00000006706	DKC1	58	85.000	Chlorocebus_sabaeus
ENSODEG00000000549	-	100	76.000	ENSCPBG00000005858	DKC1	64	76.000	Chrysemys_picta_bellii
ENSODEG00000000549	-	89	63.736	ENSCING00000004599	-	53	63.768	Ciona_intestinalis
ENSODEG00000000549	-	90	62.319	ENSCSAVG00000010047	-	62	62.319	Ciona_savignyi
ENSODEG00000000549	-	100	85.000	ENSCANG00000027987	DKC1	58	85.000	Colobus_angolensis_palliatus
ENSODEG00000000549	-	100	85.000	ENSCGRG00001014574	-	58	85.000	Cricetulus_griseus_chok1gshd
ENSODEG00000000549	-	100	64.000	ENSCGRG00001016789	-	63	64.000	Cricetulus_griseus_chok1gshd
ENSODEG00000000549	-	100	64.000	ENSCGRG00000014809	-	61	64.000	Cricetulus_griseus_crigri
ENSODEG00000000549	-	100	85.000	ENSCGRG00000016075	-	58	85.000	Cricetulus_griseus_crigri
ENSODEG00000000549	-	94	72.535	ENSCSEG00000012633	dkc1	59	73.118	Cynoglossus_semilaevis
ENSODEG00000000549	-	92	70.609	ENSCVAG00000010155	dkc1	55	70.609	Cyprinodon_variegatus
ENSODEG00000000549	-	92	71.685	ENSDARG00000016484	dkc1	55	71.685	Danio_rerio
ENSODEG00000000549	-	100	84.333	ENSDNOG00000004218	DKC1	58	84.333	Dasypus_novemcinctus
ENSODEG00000000549	-	100	97.308	ENSDORG00000013566	-	100	97.308	Dipodomys_ordii
ENSODEG00000000549	-	92	61.290	FBgn0259937	Nop60B	86	69.744	Drosophila_melanogaster
ENSODEG00000000549	-	100	82.333	ENSETEG00000016095	DKC1	61	82.333	Echinops_telfairi
ENSODEG00000000549	-	97	64.726	ENSEBUG00000015962	dkc1	83	67.206	Eptatretus_burgeri
ENSODEG00000000549	-	100	85.333	ENSEASG00005007484	DKC1	58	85.333	Equus_asinus_asinus
ENSODEG00000000549	-	100	85.333	ENSECAG00000023524	DKC1	58	85.333	Equus_caballus
ENSODEG00000000549	-	89	80.074	ENSEEUG00000003323	DKC1	63	80.074	Erinaceus_europaeus
ENSODEG00000000549	-	100	70.000	ENSELUG00000014538	dkc1	56	72.043	Esox_lucius
ENSODEG00000000549	-	100	84.333	ENSFCAG00000006577	DKC1	59	84.333	Felis_catus
ENSODEG00000000549	-	92	74.126	ENSFALG00000011496	DKC1	55	74.126	Ficedula_albicollis
ENSODEG00000000549	-	98	85.424	ENSFDAG00000002516	DKC1	60	84.175	Fukomys_damarensis
ENSODEG00000000549	-	91	70.397	ENSFHEG00000004627	dkc1	56	69.892	Fundulus_heteroclitus
ENSODEG00000000549	-	89	68.382	ENSGMOG00000017277	dkc1	70	68.382	Gadus_morhua
ENSODEG00000000549	-	92	77.143	ENSGALG00000005054	DKC1	54	77.143	Gallus_gallus
ENSODEG00000000549	-	92	72.760	ENSGACG00000004373	dkc1	71	72.840	Gasterosteus_aculeatus
ENSODEG00000000549	-	92	77.500	ENSGAGG00000011330	DKC1	58	76.333	Gopherus_agassizii
ENSODEG00000000549	-	100	85.000	ENSGGOG00000001045	DKC1	58	85.000	Gorilla_gorilla
ENSODEG00000000549	-	100	69.667	ENSHBUG00000012436	dkc1	59	70.000	Haplochromis_burtoni
ENSODEG00000000549	-	100	85.333	ENSHGLG00000000649	DKC1	58	85.333	Heterocephalus_glaber_female
ENSODEG00000000549	-	98	85.034	ENSHGLG00100001153	DKC1	58	85.034	Heterocephalus_glaber_male
ENSODEG00000000549	-	91	72.101	ENSHCOG00000021099	dkc1	55	72.101	Hippocampus_comes
ENSODEG00000000549	-	92	71.685	ENSIPUG00000010309	dkc1	57	69.000	Ictalurus_punctatus
ENSODEG00000000549	-	100	85.333	ENSSTOG00000001074	-	62	85.333	Ictidomys_tridecemlineatus
ENSODEG00000000549	-	100	73.000	ENSSTOG00000011904	-	55	73.000	Ictidomys_tridecemlineatus
ENSODEG00000000549	-	100	72.667	ENSSTOG00000020149	-	57	72.000	Ictidomys_tridecemlineatus
ENSODEG00000000549	-	59	71.242	ENSJJAG00000008207	-	96	71.242	Jaculus_jaculus
ENSODEG00000000549	-	100	97.692	ENSJJAG00000010086	-	100	97.692	Jaculus_jaculus
ENSODEG00000000549	-	91	72.101	ENSKMAG00000008010	dkc1	56	71.326	Kryptolebias_marmoratus
ENSODEG00000000549	-	90	72.000	ENSLBEG00000019122	dkc1	61	70.000	Labrus_bergylta
ENSODEG00000000549	-	92	74.910	ENSLACG00000014025	DKC1	64	74.910	Latimeria_chalumnae
ENSODEG00000000549	-	92	73.118	ENSLOCG00000013713	dkc1	55	75.564	Lepisosteus_oculatus
ENSODEG00000000549	-	99	82.943	ENSLAFG00000000221	DKC1	58	82.943	Loxodonta_africana
ENSODEG00000000549	-	100	85.000	ENSMFAG00000032398	DKC1	50	85.000	Macaca_fascicularis
ENSODEG00000000549	-	100	85.000	ENSMMUG00000005768	DKC1	58	85.000	Macaca_mulatta
ENSODEG00000000549	-	100	85.000	ENSMNEG00000034503	DKC1	58	85.000	Macaca_nemestrina
ENSODEG00000000549	-	100	85.000	ENSMLEG00000034422	DKC1	58	85.000	Mandrillus_leucophaeus
ENSODEG00000000549	-	93	72.598	ENSMAMG00000005427	dkc1	62	72.760	Mastacembelus_armatus
ENSODEG00000000549	-	100	70.000	ENSMZEG00005014503	dkc1	59	70.333	Maylandia_zebra
ENSODEG00000000549	-	78	75.309	ENSMGAG00000009238	DKC1	53	75.309	Meleagris_gallopavo
ENSODEG00000000549	-	100	98.077	ENSMAUG00000016454	-	100	98.077	Mesocricetus_auratus
ENSODEG00000000549	-	100	84.333	ENSMICG00000038751	-	66	97.235	Microcebus_murinus
ENSODEG00000000549	-	73	75.217	ENSMICG00000002818	-	64	75.217	Microcebus_murinus
ENSODEG00000000549	-	100	94.615	ENSMOCG00000001169	-	100	94.615	Microtus_ochrogaster
ENSODEG00000000549	-	92	72.401	ENSMMOG00000020348	dkc1	61	72.401	Mola_mola
ENSODEG00000000549	-	100	76.667	ENSMODG00000009243	DKC1	52	76.667	Monodelphis_domestica
ENSODEG00000000549	-	92	71.326	ENSMALG00000009454	dkc1	55	71.326	Monopterus_albus
ENSODEG00000000549	-	100	79.245	MGP_CAROLIEiJ_G0033191	Dkc1	100	95.270	Mus_caroli
ENSODEG00000000549	-	100	98.077	ENSMUSG00000031403	Dkc1	100	98.077	Mus_musculus
ENSODEG00000000549	-	100	98.077	MGP_PahariEiJ_G0031735	Dkc1	100	98.077	Mus_pahari
ENSODEG00000000549	-	100	98.077	MGP_SPRETEiJ_G0034351	Dkc1	100	98.077	Mus_spretus
ENSODEG00000000549	-	100	84.000	ENSMPUG00000016136	DKC1	56	84.000	Mustela_putorius_furo
ENSODEG00000000549	-	100	82.667	ENSMLUG00000011918	DKC1	58	82.667	Myotis_lucifugus
ENSODEG00000000549	-	100	98.077	ENSNGAG00000015724	-	100	98.077	Nannospalax_galili
ENSODEG00000000549	-	91	72.924	ENSNBRG00000005638	dkc1	56	72.401	Neolamprologus_brichardi
ENSODEG00000000549	-	100	85.000	ENSNLEG00000014323	DKC1	58	85.000	Nomascus_leucogenys
ENSODEG00000000549	-	93	77.385	ENSMEUG00000001066	DKC1	61	78.136	Notamacropus_eugenii
ENSODEG00000000549	-	98	73.898	ENSOPRG00000005248	DKC1	59	73.898	Ochotona_princeps
ENSODEG00000000549	-	91	73.285	ENSONIG00000013889	dkc1	55	73.285	Oreochromis_niloticus
ENSODEG00000000549	-	87	81.203	ENSOANG00000008713	-	55	81.203	Ornithorhynchus_anatinus
ENSODEG00000000549	-	100	84.333	ENSOCUG00000012646	DKC1	59	84.333	Oryctolagus_cuniculus
ENSODEG00000000549	-	89	72.426	ENSORLG00000018748	dkc1	54	71.377	Oryzias_latipes
ENSODEG00000000549	-	91	71.841	ENSOMEG00000005786	dkc1	67	85.052	Oryzias_melastigma
ENSODEG00000000549	-	100	84.333	ENSOGAG00000003399	DKC1	57	84.333	Otolemur_garnettii
ENSODEG00000000549	-	100	83.333	ENSOARG00000003047	DKC1	59	83.333	Ovis_aries
ENSODEG00000000549	-	100	85.000	ENSPPAG00000023820	DKC1	58	85.000	Pan_paniscus
ENSODEG00000000549	-	100	84.333	ENSPPRG00000009104	DKC1	59	84.333	Panthera_pardus
ENSODEG00000000549	-	98	84.407	ENSPTIG00000017469	DKC1	60	84.407	Panthera_tigris_altaica
ENSODEG00000000549	-	100	85.000	ENSPTRG00000022449	DKC1	58	85.000	Pan_troglodytes
ENSODEG00000000549	-	100	85.000	ENSPTRG00000043416	-	51	85.000	Pan_troglodytes
ENSODEG00000000549	-	100	85.000	ENSPANG00000011978	DKC1	58	85.000	Papio_anubis
ENSODEG00000000549	-	91	73.551	ENSPKIG00000008443	dkc1	58	73.551	Paramormyrops_kingsleyae
ENSODEG00000000549	-	89	78.309	ENSPSIG00000013765	DKC1	65	78.309	Pelodiscus_sinensis
ENSODEG00000000549	-	91	68.592	ENSPMGG00000004097	dkc1	50	68.100	Periophthalmus_magnuspinnatus
ENSODEG00000000549	-	100	86.154	ENSPEMG00000013348	Dkc1	52	86.154	Peromyscus_maniculatus_bairdii
ENSODEG00000000549	-	100	77.000	ENSPCIG00000016706	DKC1	51	77.000	Phascolarctos_cinereus
ENSODEG00000000549	-	91	71.480	ENSPFOG00000018653	dkc1	55	71.480	Poecilia_formosa
ENSODEG00000000549	-	91	71.480	ENSPLAG00000003272	dkc1	50	71.480	Poecilia_latipinna
ENSODEG00000000549	-	91	71.480	ENSPMEG00000010413	dkc1	55	71.480	Poecilia_mexicana
ENSODEG00000000549	-	91	71.841	ENSPREG00000004100	dkc1	54	71.841	Poecilia_reticulata
ENSODEG00000000549	-	98	84.746	ENSPPYG00000020892	DKC1	58	84.746	Pongo_abelii
ENSODEG00000000549	-	100	84.667	ENSPCOG00000026874	DKC1	58	84.667	Propithecus_coquereli
ENSODEG00000000549	-	100	84.000	ENSPVAG00000009222	DKC1	60	84.000	Pteropus_vampyrus
ENSODEG00000000549	-	91	72.924	ENSPNYG00000020063	dkc1	56	72.401	Pundamilia_nyererei
ENSODEG00000000549	-	100	70.333	ENSPNAG00000005780	dkc1	56	71.685	Pygocentrus_nattereri
ENSODEG00000000549	-	100	76.490	ENSRNOG00000055562	Dkc1	59	76.490	Rattus_norvegicus
ENSODEG00000000549	-	100	85.000	ENSRBIG00000028457	DKC1	50	85.000	Rhinopithecus_bieti
ENSODEG00000000549	-	100	85.000	ENSRROG00000044780	DKC1	58	85.000	Rhinopithecus_roxellana
ENSODEG00000000549	-	87	62.921	YLR175W	-	55	62.921	Saccharomyces_cerevisiae
ENSODEG00000000549	-	100	84.667	ENSSBOG00000033746	DKC1	58	84.667	Saimiri_boliviensis_boliviensis
ENSODEG00000000549	-	100	77.333	ENSSHAG00000002463	DKC1	63	77.333	Sarcophilus_harrisii
ENSODEG00000000549	-	100	71.333	ENSSFOG00015009585	dkc1	58	71.333	Scleropages_formosus
ENSODEG00000000549	-	92	74.194	ENSSMAG00000002552	dkc1	55	75.000	Scophthalmus_maximus
ENSODEG00000000549	-	90	73.358	ENSSDUG00000009963	dkc1	59	70.667	Seriola_dumerili
ENSODEG00000000549	-	90	73.358	ENSSLDG00000019342	dkc1	58	72.760	Seriola_lalandi_dorsalis
ENSODEG00000000549	-	92	74.286	ENSSARG00000001822	DKC1	58	74.658	Sorex_araneus
ENSODEG00000000549	-	100	75.667	ENSSPUG00000018907	DKC1	57	75.667	Sphenodon_punctatus
ENSODEG00000000549	-	91	73.188	ENSSPAG00000002585	dkc1	53	73.188	Stegastes_partitus
ENSODEG00000000549	-	100	84.385	ENSSSCG00000012823	DKC1	63	84.385	Sus_scrofa
ENSODEG00000000549	-	78	75.720	ENSTGUG00000006781	DKC1	54	75.720	Taeniopygia_guttata
ENSODEG00000000549	-	90	72.727	ENSTRUG00000004413	dkc1	55	72.727	Takifugu_rubripes
ENSODEG00000000549	-	91	49.110	ENSTNIG00000002582	dkc1	55	47.902	Tetraodon_nigroviridis
ENSODEG00000000549	-	100	79.000	ENSTTRG00000008089	DKC1	59	79.000	Tursiops_truncatus
ENSODEG00000000549	-	98	84.068	ENSUAMG00000022721	DKC1	69	96.698	Ursus_americanus
ENSODEG00000000549	-	98	83.390	ENSUMAG00000016899	DKC1	69	95.755	Ursus_maritimus
ENSODEG00000000549	-	74	100.000	ENSVPAG00000003259	-	63	100.000	Vicugna_pacos
ENSODEG00000000549	-	92	64.029	ENSVVUG00000021671	-	54	62.791	Vulpes_vulpes
ENSODEG00000000549	-	98	83.113	ENSVVUG00000020734	-	52	83.113	Vulpes_vulpes
ENSODEG00000000549	-	92	75.269	ENSXETG00000032517	DKC1	56	75.269	Xenopus_tropicalis
ENSODEG00000000549	-	91	71.119	ENSXCOG00000005498	dkc1	59	71.119	Xiphophorus_couchianus
ENSODEG00000000549	-	91	71.119	ENSXMAG00000004919	dkc1	56	71.119	Xiphophorus_maculatus