EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000000860 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 2850 bases
Position: chrJH651749.1:271920-274769
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000001081	XRN_N	PF03159.18	5.6e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000001109	-	2664	-	ENSODEP00000001081	887 (aa)	-	-

Gene Model

Click here to download ENSODEG00000000860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000000860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000000860	-	99	91.262	ENSODEG00000010745	-	98	91.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000000860	-	99	88.997	ENSG00000088930	XRN2	98	88.565	Homo_sapiens
ENSODEG00000000860	-	97	65.005	ENSAPOG00000009818	xrn2	96	64.581	Acanthochromis_polyacanthus
ENSODEG00000000860	-	99	88.673	ENSAMEG00000012581	XRN2	98	88.242	Ailuropoda_melanoleuca
ENSODEG00000000860	-	91	65.308	ENSACIG00000015047	xrn2	92	68.173	Amphilophus_citrinellus
ENSODEG00000000860	-	97	65.330	ENSAOCG00000023632	xrn2	96	65.143	Amphiprion_ocellaris
ENSODEG00000000860	-	97	65.152	ENSAPEG00000014871	xrn2	96	64.831	Amphiprion_percula
ENSODEG00000000860	-	96	65.017	ENSATEG00000001273	xrn2	97	64.034	Anabas_testudineus
ENSODEG00000000860	-	97	76.788	ENSAPLG00000013869	XRN2	99	76.144	Anas_platyrhynchos
ENSODEG00000000860	-	99	73.319	ENSACAG00000005565	XRN2	97	73.774	Anolis_carolinensis
ENSODEG00000000860	-	99	88.350	ENSANAG00000020126	XRN2	98	87.918	Aotus_nancymaae
ENSODEG00000000860	-	91	67.654	ENSACLG00000010522	xrn2	95	68.009	Astatotilapia_calliptera
ENSODEG00000000860	-	98	66.169	ENSAMXG00000018301	xrn2	97	66.102	Astyanax_mexicanus
ENSODEG00000000860	-	99	87.392	ENSBTAG00000011304	XRN2	99	86.359	Bos_taurus
ENSODEG00000000860	-	88	51.246	WBGene00006964	xrn-2	87	50.288	Caenorhabditis_elegans
ENSODEG00000000860	-	99	88.673	ENSCJAG00000005611	XRN2	98	88.242	Callithrix_jacchus
ENSODEG00000000860	-	99	88.781	ENSCAFG00000005185	XRN2	98	88.350	Canis_familiaris
ENSODEG00000000860	-	99	88.781	ENSCAFG00020027479	XRN2	98	88.350	Canis_lupus_dingo
ENSODEG00000000860	-	99	87.608	ENSCHIG00000006921	XRN2	98	87.177	Capra_hircus
ENSODEG00000000860	-	99	88.242	ENSTSYG00000008315	XRN2	98	87.810	Carlito_syrichta
ENSODEG00000000860	-	98	75.275	ENSCAPG00000010773	XRN2	98	74.973	Cavia_aperea
ENSODEG00000000860	-	99	89.213	ENSCPOG00000009407	XRN2	98	88.781	Cavia_porcellus
ENSODEG00000000860	-	99	89.105	ENSCATG00000040350	XRN2	98	88.673	Cercocebus_atys
ENSODEG00000000860	-	99	90.399	ENSCLAG00000013419	XRN2	98	89.968	Chinchilla_lanigera
ENSODEG00000000860	-	99	89.105	ENSCSAG00000011094	XRN2	98	88.673	Chlorocebus_sabaeus
ENSODEG00000000860	-	69	88.172	ENSCHOG00000013404	XRN2	69	88.172	Choloepus_hoffmanni
ENSODEG00000000860	-	98	77.263	ENSCPBG00000023533	XRN2	99	77.297	Chrysemys_picta_bellii
ENSODEG00000000860	-	87	55.636	ENSCING00000022336	-	98	56.000	Ciona_intestinalis
ENSODEG00000000860	-	93	52.045	ENSCSAVG00000011217	-	97	55.750	Ciona_savignyi
ENSODEG00000000860	-	99	89.105	ENSCANG00000040240	XRN2	98	88.673	Colobus_angolensis_palliatus
ENSODEG00000000860	-	98	87.336	ENSCGRG00001010676	Xrn2	98	86.900	Cricetulus_griseus_chok1gshd
ENSODEG00000000860	-	98	86.478	ENSCGRG00000006378	Xrn2	99	86.041	Cricetulus_griseus_crigri
ENSODEG00000000860	-	54	66.197	ENSCSEG00000005628	xrn2	97	65.795	Cynoglossus_semilaevis
ENSODEG00000000860	-	91	66.745	ENSCVAG00000018999	xrn2	95	70.117	Cyprinodon_variegatus
ENSODEG00000000860	-	99	64.271	ENSDARG00000101900	xrn2	94	70.980	Danio_rerio
ENSODEG00000000860	-	99	87.702	ENSDNOG00000001895	XRN2	98	87.271	Dasypus_novemcinctus
ENSODEG00000000860	-	99	86.947	ENSDORG00000005434	Xrn2	98	86.516	Dipodomys_ordii
ENSODEG00000000860	-	88	52.259	FBgn0031868	Rat1	85	52.393	Drosophila_melanogaster
ENSODEG00000000860	-	93	86.432	ENSETEG00000001740	XRN2	91	86.189	Echinops_telfairi
ENSODEG00000000860	-	85	65.389	ENSEBUG00000016136	xrn2	99	66.539	Eptatretus_burgeri
ENSODEG00000000860	-	99	88.565	ENSEASG00005002484	XRN2	98	88.134	Equus_asinus_asinus
ENSODEG00000000860	-	99	88.457	ENSECAG00000018988	XRN2	98	86.349	Equus_caballus
ENSODEG00000000860	-	78	79.770	ENSEEUG00000009265	XRN2	77	79.276	Erinaceus_europaeus
ENSODEG00000000860	-	96	66.009	ENSELUG00000000552	xrn2	98	64.286	Esox_lucius
ENSODEG00000000860	-	99	88.565	ENSFCAG00000007970	XRN2	98	88.134	Felis_catus
ENSODEG00000000860	-	98	76.221	ENSFALG00000004508	XRN2	98	75.591	Ficedula_albicollis
ENSODEG00000000860	-	99	89.752	ENSFDAG00000016311	XRN2	98	89.320	Fukomys_damarensis
ENSODEG00000000860	-	54	62.427	ENSFHEG00000013039	xrn2	95	63.209	Fundulus_heteroclitus
ENSODEG00000000860	-	87	67.037	ENSGMOG00000013436	xrn2	98	67.160	Gadus_morhua
ENSODEG00000000860	-	99	75.565	ENSGALG00000008372	XRN2	97	75.488	Gallus_gallus
ENSODEG00000000860	-	91	67.769	ENSGAFG00000014284	xrn2	96	68.241	Gambusia_affinis
ENSODEG00000000860	-	89	68.742	ENSGACG00000011870	xrn2	98	68.987	Gasterosteus_aculeatus
ENSODEG00000000860	-	98	77.047	ENSGAGG00000004884	XRN2	98	77.268	Gopherus_agassizii
ENSODEG00000000860	-	99	89.213	ENSGGOG00000013738	XRN2	98	88.781	Gorilla_gorilla
ENSODEG00000000860	-	54	67.323	ENSHBUG00000005077	xrn2	92	67.913	Haplochromis_burtoni
ENSODEG00000000860	-	99	90.000	ENSHGLG00000014831	XRN2	98	90.000	Heterocephalus_glaber_female
ENSODEG00000000860	-	99	90.000	ENSHGLG00100013130	XRN2	98	90.000	Heterocephalus_glaber_male
ENSODEG00000000860	-	92	68.961	ENSHCOG00000011994	xrn2	92	68.160	Hippocampus_comes
ENSODEG00000000860	-	98	64.475	ENSIPUG00000006639	xrn2	97	64.581	Ictalurus_punctatus
ENSODEG00000000860	-	99	89.320	ENSSTOG00000000589	XRN2	98	88.889	Ictidomys_tridecemlineatus
ENSODEG00000000860	-	99	87.918	ENSJJAG00000022128	Xrn2	98	87.594	Jaculus_jaculus
ENSODEG00000000860	-	54	72.545	ENSLBEG00000010041	xrn2	97	72.946	Labrus_bergylta
ENSODEG00000000860	-	96	70.470	ENSLACG00000008307	XRN2	99	74.419	Latimeria_chalumnae
ENSODEG00000000860	-	99	66.524	ENSLOCG00000016874	xrn2	98	66.953	Lepisosteus_oculatus
ENSODEG00000000860	-	99	86.947	ENSLAFG00000014624	XRN2	98	86.516	Loxodonta_africana
ENSODEG00000000860	-	99	89.105	ENSMFAG00000038122	XRN2	98	88.673	Macaca_fascicularis
ENSODEG00000000860	-	99	89.105	ENSMMUG00000011405	XRN2	98	88.673	Macaca_mulatta
ENSODEG00000000860	-	99	89.213	ENSMNEG00000040626	XRN2	98	88.781	Macaca_nemestrina
ENSODEG00000000860	-	99	88.997	ENSMLEG00000041897	XRN2	98	88.565	Mandrillus_leucophaeus
ENSODEG00000000860	-	96	66.332	ENSMAMG00000008633	xrn2	97	64.781	Mastacembelus_armatus
ENSODEG00000000860	-	91	69.550	ENSMZEG00005022362	xrn2	95	69.905	Maylandia_zebra
ENSODEG00000000860	-	98	75.791	ENSMGAG00000003196	XRN2	96	75.244	Meleagris_gallopavo
ENSODEG00000000860	-	99	87.702	ENSMAUG00000021842	Xrn2	98	87.271	Mesocricetus_auratus
ENSODEG00000000860	-	99	88.242	ENSMICG00000008126	XRN2	98	87.810	Microcebus_murinus
ENSODEG00000000860	-	99	87.163	ENSMOCG00000012588	Xrn2	98	86.731	Microtus_ochrogaster
ENSODEG00000000860	-	91	67.093	ENSMMOG00000017576	xrn2	94	67.209	Mola_mola
ENSODEG00000000860	-	99	82.956	ENSMODG00000006163	XRN2	98	82.632	Monodelphis_domestica
ENSODEG00000000860	-	91	66.706	ENSMALG00000011355	xrn2	96	66.822	Monopterus_albus
ENSODEG00000000860	-	99	86.746	MGP_CAROLIEiJ_G0024400	Xrn2	98	86.315	Mus_caroli
ENSODEG00000000860	-	99	86.961	ENSMUSG00000027433	Xrn2	98	86.530	Mus_musculus
ENSODEG00000000860	-	99	86.746	MGP_PahariEiJ_G0025843	Xrn2	98	86.315	Mus_pahari
ENSODEG00000000860	-	99	86.961	MGP_SPRETEiJ_G0025318	Xrn2	98	86.530	Mus_spretus
ENSODEG00000000860	-	99	87.076	ENSMPUG00000001198	XRN2	91	86.653	Mustela_putorius_furo
ENSODEG00000000860	-	99	88.565	ENSMLUG00000001536	XRN2	98	88.134	Myotis_lucifugus
ENSODEG00000000860	-	99	88.026	ENSNGAG00000018138	Xrn2	98	87.594	Nannospalax_galili
ENSODEG00000000860	-	91	69.787	ENSNBRG00000008062	xrn2	95	70.107	Neolamprologus_brichardi
ENSODEG00000000860	-	99	88.997	ENSNLEG00000009991	XRN2	98	88.565	Nomascus_leucogenys
ENSODEG00000000860	-	66	95.556	ENSMEUG00000008622	-	66	95.556	Notamacropus_eugenii
ENSODEG00000000860	-	75	74.346	ENSOPRG00000001397	-	76	74.346	Ochotona_princeps
ENSODEG00000000860	-	97	65.899	ENSONIG00000018720	xrn2	98	65.323	Oreochromis_niloticus
ENSODEG00000000860	-	99	83.172	ENSOANG00000015673	XRN2	97	82.848	Ornithorhynchus_anatinus
ENSODEG00000000860	-	99	88.997	ENSOCUG00000013468	XRN2	98	88.565	Oryctolagus_cuniculus
ENSODEG00000000860	-	99	63.848	ENSORLG00000017213	xrn2	95	68.750	Oryzias_latipes
ENSODEG00000000860	-	99	63.848	ENSORLG00020001824	xrn2	98	63.915	Oryzias_latipes_hni
ENSODEG00000000860	-	99	63.848	ENSORLG00015019747	xrn2	98	63.941	Oryzias_latipes_hsok
ENSODEG00000000860	-	91	67.609	ENSOMEG00000019820	xrn2	96	63.064	Oryzias_melastigma
ENSODEG00000000860	-	99	87.608	ENSOGAG00000001068	XRN2	98	87.177	Otolemur_garnettii
ENSODEG00000000860	-	98	87.555	ENSOARG00000004443	XRN2	99	87.118	Ovis_aries
ENSODEG00000000860	-	99	89.213	ENSPPAG00000033549	XRN2	98	88.781	Pan_paniscus
ENSODEG00000000860	-	99	88.565	ENSPPRG00000008732	XRN2	98	88.134	Panthera_pardus
ENSODEG00000000860	-	98	88.415	ENSPTIG00000015683	XRN2	96	87.978	Panthera_tigris_altaica
ENSODEG00000000860	-	99	89.213	ENSPTRG00000013308	XRN2	98	88.781	Pan_troglodytes
ENSODEG00000000860	-	99	89.105	ENSPANG00000018088	XRN2	98	88.673	Papio_anubis
ENSODEG00000000860	-	93	68.245	ENSPKIG00000016889	xrn2	98	64.984	Paramormyrops_kingsleyae
ENSODEG00000000860	-	83	80.469	ENSPSIG00000014666	XRN2	100	80.078	Pelodiscus_sinensis
ENSODEG00000000860	-	99	87.163	ENSPEMG00000000111	Xrn2	98	86.731	Peromyscus_maniculatus_bairdii
ENSODEG00000000860	-	98	64.502	ENSPFOG00000004182	xrn2	96	64.935	Poecilia_formosa
ENSODEG00000000860	-	91	68.241	ENSPLAG00000007351	xrn2	95	68.713	Poecilia_latipinna
ENSODEG00000000860	-	93	63.058	ENSPMEG00000011798	xrn2	97	63.504	Poecilia_mexicana
ENSODEG00000000860	-	91	68.241	ENSPREG00000012452	xrn2	95	68.713	Poecilia_reticulata
ENSODEG00000000860	-	99	88.565	ENSPPYG00000010755	XRN2	98	88.134	Pongo_abelii
ENSODEG00000000860	-	99	81.681	ENSPCAG00000011191	XRN2	98	81.250	Procavia_capensis
ENSODEG00000000860	-	99	81.907	ENSPCOG00000016468	XRN2	97	81.473	Propithecus_coquereli
ENSODEG00000000860	-	91	82.759	ENSPVAG00000004596	XRN2	90	82.759	Pteropus_vampyrus
ENSODEG00000000860	-	91	67.654	ENSPNYG00000001765	xrn2	95	68.009	Pundamilia_nyererei
ENSODEG00000000860	-	99	65.756	ENSPNAG00000010956	xrn2	97	66.071	Pygocentrus_nattereri
ENSODEG00000000860	-	99	87.823	ENSRNOG00000011785	Xrn2	98	87.392	Rattus_norvegicus
ENSODEG00000000860	-	87	90.435	ENSRBIG00000036193	XRN2	98	89.938	Rhinopithecus_bieti
ENSODEG00000000860	-	99	89.105	ENSRROG00000044400	XRN2	88	88.673	Rhinopithecus_roxellana
ENSODEG00000000860	-	65	50.256	YOR048C	RAT1	61	48.593	Saccharomyces_cerevisiae
ENSODEG00000000860	-	99	88.673	ENSSBOG00000021014	XRN2	98	88.242	Saimiri_boliviensis_boliviensis
ENSODEG00000000860	-	99	66.242	ENSSFOG00015001091	xrn2	98	66.348	Scleropages_formosus
ENSODEG00000000860	-	91	68.166	ENSSMAG00000007834	xrn2	96	62.975	Scophthalmus_maximus
ENSODEG00000000860	-	96	64.502	ENSSDUG00000012802	xrn2	97	65.965	Seriola_dumerili
ENSODEG00000000860	-	91	68.780	ENSSLDG00000021273	xrn2	95	68.900	Seriola_lalandi_dorsalis
ENSODEG00000000860	-	70	69.572	ENSSARG00000005859	-	69	68.960	Sorex_araneus
ENSODEG00000000860	-	98	76.897	ENSSPUG00000005485	XRN2	94	76.562	Sphenodon_punctatus
ENSODEG00000000860	-	97	65.152	ENSSPAG00000016027	xrn2	96	65.027	Stegastes_partitus
ENSODEG00000000860	-	99	86.408	ENSSSCG00000007109	XRN2	98	85.976	Sus_scrofa
ENSODEG00000000860	-	98	75.027	ENSTGUG00000007535	XRN2	98	74.518	Taeniopygia_guttata
ENSODEG00000000860	-	96	65.006	ENSTRUG00000015489	xrn2	92	64.254	Takifugu_rubripes
ENSODEG00000000860	-	99	64.775	ENSTNIG00000010712	xrn2	98	64.561	Tetraodon_nigroviridis
ENSODEG00000000860	-	99	88.242	ENSTBEG00000004119	XRN2	98	87.689	Tupaia_belangeri
ENSODEG00000000860	-	92	89.668	ENSTTRG00000009087	XRN2	91	88.930	Tursiops_truncatus
ENSODEG00000000860	-	99	88.781	ENSUAMG00000024634	XRN2	98	88.350	Ursus_americanus
ENSODEG00000000860	-	98	88.415	ENSUMAG00000004012	XRN2	94	87.978	Ursus_maritimus
ENSODEG00000000860	-	89	81.137	ENSVPAG00000010694	XRN2	89	80.653	Vicugna_pacos
ENSODEG00000000860	-	99	88.889	ENSVVUG00000012178	XRN2	98	88.457	Vulpes_vulpes
ENSODEG00000000860	-	99	68.947	ENSXETG00000023501	xrn2	97	68.947	Xenopus_tropicalis
ENSODEG00000000860	-	98	63.607	ENSXMAG00000000242	xrn2	88	73.913	Xiphophorus_maculatus