EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000000937 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1499 bases
Position: chrJH651848.1:57619-59117
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000001189	SF3a60_bindingd	PF12108.8	4.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000001219	-	1350	-	ENSODEP00000001189	449 (aa)	-	-

Gene Model

Click here to download ENSODEG00000000937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000000937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000000937	-	100	81.474	ENSODEG00000006854	-	100	84.064
ENSODEG00000000937	-	100	82.072	ENSODEG00000007470	-	100	79.482
ENSODEG00000000937	-	100	81.535	ENSODEG00000018393	-	100	81.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000000937	-	100	86.653	ENSG00000183431	SF3A3	100	84.064	Homo_sapiens
ENSODEG00000000937	-	100	79.681	ENSAPOG00000015608	sf3a3	100	77.291	Acanthochromis_polyacanthus
ENSODEG00000000937	-	100	86.653	ENSAMEG00000001262	SF3A3	100	84.064	Ailuropoda_melanoleuca
ENSODEG00000000937	-	93	81.223	ENSACIG00000009061	sf3a3	89	78.603	Amphilophus_citrinellus
ENSODEG00000000937	-	100	80.080	ENSAOCG00000013954	sf3a3	100	77.689	Amphiprion_ocellaris
ENSODEG00000000937	-	100	80.080	ENSAPEG00000007297	sf3a3	100	77.689	Amphiprion_percula
ENSODEG00000000937	-	100	79.880	ENSATEG00000008754	sf3a3	100	77.490	Anabas_testudineus
ENSODEG00000000937	-	93	84.255	ENSAPLG00000014900	SF3A3	100	81.489	Anas_platyrhynchos
ENSODEG00000000937	-	100	83.665	ENSACAG00000017058	SF3A3	100	81.076	Anolis_carolinensis
ENSODEG00000000937	-	99	82.565	ENSANAG00000014878	SF3A3	100	79.960	Aotus_nancymaae
ENSODEG00000000937	-	100	68.699	ENSANAG00000036903	-	100	66.260	Aotus_nancymaae
ENSODEG00000000937	-	100	80.080	ENSACLG00000017977	sf3a3	100	77.689	Astatotilapia_calliptera
ENSODEG00000000937	-	100	79.880	ENSAMXG00000016855	sf3a3	87	77.490	Astyanax_mexicanus
ENSODEG00000000937	-	100	86.454	ENSBTAG00000007299	SF3A3	100	83.865	Bos_taurus
ENSODEG00000000937	-	100	45.040	WBGene00011758	T13H5.4	100	45.040	Caenorhabditis_elegans
ENSODEG00000000937	-	100	86.653	ENSCJAG00000002176	SF3A3	100	84.064	Callithrix_jacchus
ENSODEG00000000937	-	100	86.653	ENSCAFG00000003222	-	100	84.064	Canis_familiaris
ENSODEG00000000937	-	100	86.653	ENSCAFG00000000683	-	100	84.064	Canis_familiaris
ENSODEG00000000937	-	100	86.653	ENSCAFG00020006186	SF3A3	100	84.064	Canis_lupus_dingo
ENSODEG00000000937	-	100	86.454	ENSCHIG00000020638	SF3A3	100	83.865	Capra_hircus
ENSODEG00000000937	-	100	86.105	ENSTSYG00000008417	SF3A3	100	85.474	Carlito_syrichta
ENSODEG00000000937	-	83	52.000	ENSCAPG00000003466	SF3A3	100	48.941	Cavia_aperea
ENSODEG00000000937	-	100	86.853	ENSCPOG00000008660	SF3A3	100	84.263	Cavia_porcellus
ENSODEG00000000937	-	100	61.585	ENSCCAG00000034048	-	100	58.537	Cebus_capucinus
ENSODEG00000000937	-	100	86.653	ENSCCAG00000033732	SF3A3	100	84.064	Cebus_capucinus
ENSODEG00000000937	-	100	86.653	ENSCATG00000043496	SF3A3	100	84.064	Cercocebus_atys
ENSODEG00000000937	-	100	72.574	ENSCATG00000043537	-	100	72.574	Cercocebus_atys
ENSODEG00000000937	-	94	71.957	ENSCATG00000041660	-	98	70.435	Cercocebus_atys
ENSODEG00000000937	-	100	86.653	ENSCLAG00000010838	SF3A3	100	84.064	Chinchilla_lanigera
ENSODEG00000000937	-	94	88.261	ENSCSAG00000001120	SF3A3	96	88.261	Chlorocebus_sabaeus
ENSODEG00000000937	-	78	71.053	ENSCHOG00000006849	SF3A3	80	64.211	Choloepus_hoffmanni
ENSODEG00000000937	-	76	62.604	ENSCPBG00000007472	-	95	62.604	Chrysemys_picta_bellii
ENSODEG00000000937	-	100	75.896	ENSCPBG00000018291	-	100	73.307	Chrysemys_picta_bellii
ENSODEG00000000937	-	100	58.052	ENSCING00000002730	-	100	57.654	Ciona_intestinalis
ENSODEG00000000937	-	100	58.167	ENSCSAVG00000005063	-	100	57.769	Ciona_savignyi
ENSODEG00000000937	-	100	86.653	ENSCANG00000042083	SF3A3	100	84.064	Colobus_angolensis_palliatus
ENSODEG00000000937	-	100	68.162	ENSCANG00000035535	-	100	67.452	Colobus_angolensis_palliatus
ENSODEG00000000937	-	100	86.653	ENSCGRG00001011320	Sf3a3	100	84.064	Cricetulus_griseus_chok1gshd
ENSODEG00000000937	-	100	86.653	ENSCGRG00000012156	Sf3a3	100	84.064	Cricetulus_griseus_crigri
ENSODEG00000000937	-	100	78.088	ENSCSEG00000010401	sf3a3	100	75.697	Cynoglossus_semilaevis
ENSODEG00000000937	-	93	77.872	ENSCVAG00000010239	sf3a3	95	75.319	Cyprinodon_variegatus
ENSODEG00000000937	-	100	79.482	ENSDARG00000100114	sf3a3	100	77.857	Danio_rerio
ENSODEG00000000937	-	93	88.428	ENSDNOG00000046628	SF3A3	99	88.428	Dasypus_novemcinctus
ENSODEG00000000937	-	100	86.653	ENSDORG00000008798	Sf3a3	100	84.064	Dipodomys_ordii
ENSODEG00000000937	-	100	55.138	FBgn0014366	noi	100	55.138	Drosophila_melanogaster
ENSODEG00000000937	-	100	69.643	ENSEBUG00000015411	sf3a3	92	69.048	Eptatretus_burgeri
ENSODEG00000000937	-	100	86.653	ENSEASG00005012906	SF3A3	100	84.064	Equus_asinus_asinus
ENSODEG00000000937	-	100	86.653	ENSECAG00000017333	SF3A3	100	84.064	Equus_caballus
ENSODEG00000000937	-	100	77.490	ENSELUG00000010024	sf3a3	100	75.100	Esox_lucius
ENSODEG00000000937	-	100	86.653	ENSFCAG00000027772	SF3A3	100	84.064	Felis_catus
ENSODEG00000000937	-	100	84.462	ENSFALG00000001003	SF3A3	100	81.873	Ficedula_albicollis
ENSODEG00000000937	-	100	86.853	ENSFDAG00000020908	SF3A3	100	84.263	Fukomys_damarensis
ENSODEG00000000937	-	100	78.287	ENSFHEG00000019107	sf3a3	100	75.896	Fundulus_heteroclitus
ENSODEG00000000937	-	100	76.892	ENSGMOG00000015540	sf3a3	100	74.502	Gadus_morhua
ENSODEG00000000937	-	100	84.263	ENSGALG00000001540	SF3A3	100	81.673	Gallus_gallus
ENSODEG00000000937	-	100	78.685	ENSGAFG00000002320	sf3a3	100	76.295	Gambusia_affinis
ENSODEG00000000937	-	100	79.084	ENSGACG00000007842	sf3a3	100	76.693	Gasterosteus_aculeatus
ENSODEG00000000937	-	100	84.263	ENSGAGG00000014980	SF3A3	100	81.673	Gopherus_agassizii
ENSODEG00000000937	-	100	86.653	ENSGGOG00000013928	SF3A3	100	84.064	Gorilla_gorilla
ENSODEG00000000937	-	100	78.373	ENSGGOG00000022611	-	100	77.302	Gorilla_gorilla
ENSODEG00000000937	-	100	80.080	ENSHBUG00000018158	sf3a3	100	77.689	Haplochromis_burtoni
ENSODEG00000000937	-	100	87.052	ENSHGLG00000012502	SF3A3	100	87.052	Heterocephalus_glaber_female
ENSODEG00000000937	-	100	87.052	ENSHGLG00100010546	SF3A3	100	87.052	Heterocephalus_glaber_male
ENSODEG00000000937	-	100	77.888	ENSHCOG00000015109	sf3a3	100	75.498	Hippocampus_comes
ENSODEG00000000937	-	100	78.884	ENSIPUG00000011603	sf3a3	100	76.494	Ictalurus_punctatus
ENSODEG00000000937	-	100	86.853	ENSSTOG00000001691	SF3A3	100	84.263	Ictidomys_tridecemlineatus
ENSODEG00000000937	-	100	86.653	ENSJJAG00000012404	Sf3a3	100	84.064	Jaculus_jaculus
ENSODEG00000000937	-	100	78.685	ENSKMAG00000007632	sf3a3	100	76.295	Kryptolebias_marmoratus
ENSODEG00000000937	-	100	72.167	ENSLBEG00000000816	sf3a3	100	69.781	Labrus_bergylta
ENSODEG00000000937	-	100	81.076	ENSLOCG00000003273	sf3a3	100	78.685	Lepisosteus_oculatus
ENSODEG00000000937	-	100	74.104	ENSLAFG00000008094	SF3A3	100	71.514	Loxodonta_africana
ENSODEG00000000937	-	94	74.664	ENSMFAG00000036706	-	98	74.215	Macaca_fascicularis
ENSODEG00000000937	-	100	86.653	ENSMFAG00000043047	SF3A3	100	84.064	Macaca_fascicularis
ENSODEG00000000937	-	100	72.634	ENSMMUG00000038820	-	100	72.222	Macaca_mulatta
ENSODEG00000000937	-	100	86.653	ENSMMUG00000023199	SF3A3	100	84.064	Macaca_mulatta
ENSODEG00000000937	-	100	86.653	ENSMNEG00000044291	SF3A3	100	84.064	Macaca_nemestrina
ENSODEG00000000937	-	94	68.696	ENSMNEG00000028686	-	98	66.957	Macaca_nemestrina
ENSODEG00000000937	-	100	71.822	ENSMLEG00000028631	-	100	71.822	Mandrillus_leucophaeus
ENSODEG00000000937	-	100	86.653	ENSMLEG00000030641	SF3A3	100	84.064	Mandrillus_leucophaeus
ENSODEG00000000937	-	100	73.790	ENSMLEG00000036714	-	100	72.379	Mandrillus_leucophaeus
ENSODEG00000000937	-	100	79.880	ENSMAMG00000001942	sf3a3	100	77.490	Mastacembelus_armatus
ENSODEG00000000937	-	100	80.080	ENSMZEG00005016987	sf3a3	100	77.689	Maylandia_zebra
ENSODEG00000000937	-	100	79.359	ENSMGAG00000002875	SF3A3	100	76.754	Meleagris_gallopavo
ENSODEG00000000937	-	100	80.876	ENSMICG00000043548	-	100	78.685	Microcebus_murinus
ENSODEG00000000937	-	93	85.839	ENSMICG00000026541	-	100	83.224	Microcebus_murinus
ENSODEG00000000937	-	100	81.873	ENSMICG00000001485	-	100	79.283	Microcebus_murinus
ENSODEG00000000937	-	100	83.068	ENSMOCG00000019939	-	100	80.478	Microtus_ochrogaster
ENSODEG00000000937	-	94	80.297	ENSMOCG00000014565	-	97	78.602	Microtus_ochrogaster
ENSODEG00000000937	-	100	80.080	ENSMMOG00000014307	sf3a3	100	77.689	Mola_mola
ENSODEG00000000937	-	100	75.591	ENSMODG00000017729	-	100	74.951	Monodelphis_domestica
ENSODEG00000000937	-	100	79.482	ENSMODG00000024045	-	100	77.490	Monodelphis_domestica
ENSODEG00000000937	-	100	79.283	ENSMALG00000004836	sf3a3	100	76.892	Monopterus_albus
ENSODEG00000000937	-	100	86.653	MGP_CAROLIEiJ_G0026449	Sf3a3	100	84.064	Mus_caroli
ENSODEG00000000937	-	100	86.653	ENSMUSG00000028902	Sf3a3	100	84.064	Mus_musculus
ENSODEG00000000937	-	100	80.876	MGP_PahariEiJ_G0028780	Sf3a3	100	78.287	Mus_pahari
ENSODEG00000000937	-	100	86.653	MGP_SPRETEiJ_G0027428	Sf3a3	100	84.064	Mus_spretus
ENSODEG00000000937	-	100	86.255	ENSMLUG00000000991	SF3A3	100	83.665	Myotis_lucifugus
ENSODEG00000000937	-	100	80.677	ENSNGAG00000018032	Sf3a3	100	78.088	Nannospalax_galili
ENSODEG00000000937	-	100	77.490	ENSNLEG00000011720	SF3A3	100	74.900	Nomascus_leucogenys
ENSODEG00000000937	-	100	87.052	ENSOPRG00000012785	SF3A3	100	87.052	Ochotona_princeps
ENSODEG00000000937	-	87	80.645	ENSONIG00000010296	sf3a3	99	77.880	Oreochromis_niloticus
ENSODEG00000000937	-	93	85.319	ENSOANG00000002473	SF3A3	100	82.553	Ornithorhynchus_anatinus
ENSODEG00000000937	-	100	87.052	ENSOCUG00000005407	SF3A3	100	87.052	Oryctolagus_cuniculus
ENSODEG00000000937	-	100	78.685	ENSORLG00000008175	sf3a3	100	76.295	Oryzias_latipes
ENSODEG00000000937	-	100	78.486	ENSORLG00020013708	sf3a3	100	76.096	Oryzias_latipes_hni
ENSODEG00000000937	-	100	78.486	ENSORLG00015004104	sf3a3	100	76.096	Oryzias_latipes_hsok
ENSODEG00000000937	-	100	78.685	ENSOMEG00000020177	sf3a3	100	76.295	Oryzias_melastigma
ENSODEG00000000937	-	100	86.454	ENSOARG00000019950	SF3A3	100	83.865	Ovis_aries
ENSODEG00000000937	-	100	86.653	ENSPPAG00000034066	SF3A3	100	84.064	Pan_paniscus
ENSODEG00000000937	-	100	77.730	ENSPPAG00000039955	-	100	76.660	Pan_paniscus
ENSODEG00000000937	-	100	86.653	ENSPPRG00000001258	SF3A3	100	84.064	Panthera_pardus
ENSODEG00000000937	-	100	86.653	ENSPTIG00000007515	SF3A3	100	84.064	Panthera_tigris_altaica
ENSODEG00000000937	-	100	78.373	ENSPTRG00000046013	-	100	77.302	Pan_troglodytes
ENSODEG00000000937	-	100	86.653	ENSPTRG00000000559	SF3A3	100	84.064	Pan_troglodytes
ENSODEG00000000937	-	100	76.613	ENSPANG00000029393	-	100	75.202	Papio_anubis
ENSODEG00000000937	-	100	86.653	ENSPANG00000021859	SF3A3	100	84.064	Papio_anubis
ENSODEG00000000937	-	100	69.556	ENSPANG00000031214	-	100	70.825	Papio_anubis
ENSODEG00000000937	-	100	80.677	ENSPKIG00000004719	sf3a3	100	78.287	Paramormyrops_kingsleyae
ENSODEG00000000937	-	100	81.746	ENSPSIG00000004273	SF3A3	100	79.563	Pelodiscus_sinensis
ENSODEG00000000937	-	93	80.568	ENSPMGG00000003610	sf3a3	94	77.729	Periophthalmus_magnuspinnatus
ENSODEG00000000937	-	100	86.653	ENSPEMG00000020805	Sf3a3	100	84.064	Peromyscus_maniculatus_bairdii
ENSODEG00000000937	-	59	75.182	ENSPMAG00000001044	sf3a3	99	75.182	Petromyzon_marinus
ENSODEG00000000937	-	100	86.056	ENSPCIG00000025719	SF3A3	100	83.466	Phascolarctos_cinereus
ENSODEG00000000937	-	100	78.884	ENSPFOG00000005284	sf3a3	100	76.494	Poecilia_formosa
ENSODEG00000000937	-	99	75.502	ENSPLAG00000003979	sf3a3	92	73.092	Poecilia_latipinna
ENSODEG00000000937	-	93	75.991	ENSPMEG00000021132	sf3a3	94	75.291	Poecilia_mexicana
ENSODEG00000000937	-	100	78.685	ENSPREG00000013802	sf3a3	100	76.295	Poecilia_reticulata
ENSODEG00000000937	-	100	83.665	ENSPPYG00000001519	SF3A3	100	81.076	Pongo_abelii
ENSODEG00000000937	-	100	79.880	ENSPCAG00000010734	SF3A3	100	77.291	Procavia_capensis
ENSODEG00000000937	-	100	75.050	ENSPCOG00000020389	-	100	72.475	Propithecus_coquereli
ENSODEG00000000937	-	100	70.518	ENSPCOG00000017131	-	100	69.920	Propithecus_coquereli
ENSODEG00000000937	-	100	73.904	ENSPVAG00000010158	SF3A3	100	73.307	Pteropus_vampyrus
ENSODEG00000000937	-	100	80.080	ENSPNYG00000000786	sf3a3	100	77.689	Pundamilia_nyererei
ENSODEG00000000937	-	100	79.482	ENSPNAG00000010298	sf3a3	100	77.092	Pygocentrus_nattereri
ENSODEG00000000937	-	100	86.653	ENSRNOG00000007629	Sf3a3	99	88.428	Rattus_norvegicus
ENSODEG00000000937	-	100	63.747	ENSRBIG00000043833	-	100	63.136	Rhinopithecus_bieti
ENSODEG00000000937	-	100	86.653	ENSRBIG00000043567	SF3A3	100	84.064	Rhinopithecus_bieti
ENSODEG00000000937	-	100	65.904	ENSRBIG00000041123	-	100	65.833	Rhinopithecus_bieti
ENSODEG00000000937	-	100	86.653	ENSRROG00000033888	SF3A3	100	84.064	Rhinopithecus_roxellana
ENSODEG00000000937	-	94	72.098	ENSRROG00000032346	-	98	71.652	Rhinopithecus_roxellana
ENSODEG00000000937	-	92	80.294	ENSSBOG00000032688	SF3A3	100	76.471	Saimiri_boliviensis_boliviensis
ENSODEG00000000937	-	100	65.447	ENSSBOG00000026932	-	100	62.805	Saimiri_boliviensis_boliviensis
ENSODEG00000000937	-	89	85.463	ENSSHAG00000014530	SF3A3	100	82.599	Sarcophilus_harrisii
ENSODEG00000000937	-	100	80.080	ENSSFOG00015005975	sf3a3	100	77.689	Scleropages_formosus
ENSODEG00000000937	-	100	79.283	ENSSMAG00000020213	sf3a3	100	76.892	Scophthalmus_maximus
ENSODEG00000000937	-	100	78.499	ENSSDUG00000011590	sf3a3	100	76.065	Seriola_dumerili
ENSODEG00000000937	-	100	80.080	ENSSLDG00000020635	sf3a3	100	77.689	Seriola_lalandi_dorsalis
ENSODEG00000000937	-	100	84.064	ENSSPUG00000004010	SF3A3	100	81.474	Sphenodon_punctatus
ENSODEG00000000937	-	100	79.681	ENSSPAG00000018653	sf3a3	100	77.291	Stegastes_partitus
ENSODEG00000000937	-	100	86.653	ENSSSCG00000003643	SF3A3	100	84.064	Sus_scrofa
ENSODEG00000000937	-	86	85.446	ENSTGUG00000001466	SF3A3	97	82.394	Taeniopygia_guttata
ENSODEG00000000937	-	100	78.685	ENSTRUG00000009089	sf3a3	100	76.295	Takifugu_rubripes
ENSODEG00000000937	-	100	77.976	ENSTNIG00000009800	sf3a3	100	75.595	Tetraodon_nigroviridis
ENSODEG00000000937	-	100	75.697	ENSTBEG00000007614	SF3A3	100	75.100	Tupaia_belangeri
ENSODEG00000000937	-	100	86.454	ENSTTRG00000013519	SF3A3	100	85.857	Tursiops_truncatus
ENSODEG00000000937	-	100	86.653	ENSUAMG00000006134	SF3A3	100	84.064	Ursus_americanus
ENSODEG00000000937	-	100	86.653	ENSUMAG00000021250	SF3A3	100	84.064	Ursus_maritimus
ENSODEG00000000937	-	70	94.774	ENSVPAG00000004778	SF3A3	72	94.774	Vicugna_pacos
ENSODEG00000000937	-	100	89.278	ENSVVUG00000022908	SF3A3	100	88.660	Vulpes_vulpes
ENSODEG00000000937	-	100	81.275	ENSXETG00000022923	sf3a3	100	78.884	Xenopus_tropicalis
ENSODEG00000000937	-	100	78.685	ENSXMAG00000017165	sf3a3	100	76.295	Xiphophorus_maculatus