EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001109 (Gene tree)
Gene ID: 111812643
Gene Symbol: LARP4B
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 97452 bases
Position: chrJH651648.1:6260299-6357750
Accession: 28987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000001412	La	PF05383.17	1.5e-14	1	1
ENSODEP00000001411	La	PF05383.17	1.5e-14	1	1
ENSODEP00000001410	La	PF05383.17	1.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000001447	LARP4B-203	1917	-	ENSODEP00000001412	638 (aa)	-	-
ENSODET00000001446	LARP4B-202	1935	-	ENSODEP00000001411	644 (aa)	-	-
ENSODET00000001445	LARP4B-201	2169	-	ENSODEP00000001410	722 (aa)	-	-

Gene Model

Click here to download ENSODEG00000001109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001109	LARP4B	88	43.158	ENSODEG00000009770	LARP4	99	36.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001109	LARP4B	100	86.316	ENSG00000107929	LARP4B	100	92.982	Homo_sapiens
ENSODEG00000001109	LARP4B	100	56.545	ENSAPOG00000020531	LARP4B	100	51.711	Acanthochromis_polyacanthus
ENSODEG00000001109	LARP4B	100	82.807	ENSAMEG00000001810	LARP4B	100	81.511	Ailuropoda_melanoleuca
ENSODEG00000001109	LARP4B	92	56.873	ENSAOCG00000007887	-	100	51.954	Amphiprion_ocellaris
ENSODEG00000001109	LARP4B	93	54.870	ENSAPEG00000002512	LARP4B	98	53.384	Amphiprion_percula
ENSODEG00000001109	LARP4B	100	54.619	ENSATEG00000012614	LARP4B	100	50.875	Anabas_testudineus
ENSODEG00000001109	LARP4B	100	78.125	ENSAPLG00000003813	LARP4B	98	73.067	Anas_platyrhynchos
ENSODEG00000001109	LARP4B	100	70.761	ENSACAG00000002858	LARP4B	100	70.761	Anolis_carolinensis
ENSODEG00000001109	LARP4B	100	84.211	ENSANAG00000007531	-	100	83.198	Aotus_nancymaae
ENSODEG00000001109	LARP4B	100	59.316	ENSACLG00000026356	LARP4B	100	53.433	Astatotilapia_calliptera
ENSODEG00000001109	LARP4B	92	48.942	ENSAMXG00000003335	larp4b	93	48.801	Astyanax_mexicanus
ENSODEG00000001109	LARP4B	100	79.082	ENSBTAG00000013899	LARP4B	100	79.082	Bos_taurus
ENSODEG00000001109	LARP4B	100	83.158	ENSCJAG00000018434	LARP4B	100	83.158	Callithrix_jacchus
ENSODEG00000001109	LARP4B	100	83.451	ENSCAFG00020004209	LARP4B	100	82.003	Canis_lupus_dingo
ENSODEG00000001109	LARP4B	100	78.812	ENSCHIG00000013543	LARP4B	100	78.812	Capra_hircus
ENSODEG00000001109	LARP4B	80	85.690	ENSTSYG00000002568	LARP4B	100	85.690	Carlito_syrichta
ENSODEG00000001109	LARP4B	96	77.778	ENSCAPG00000009725	LARP4B	97	77.778	Cavia_aperea
ENSODEG00000001109	LARP4B	100	92.632	ENSCPOG00000009375	LARP4B	98	92.632	Cavia_porcellus
ENSODEG00000001109	LARP4B	100	86.316	ENSCCAG00000024869	LARP4B	100	86.316	Cebus_capucinus
ENSODEG00000001109	LARP4B	100	86.316	ENSCATG00000019750	LARP4B	100	84.824	Cercocebus_atys
ENSODEG00000001109	LARP4B	100	93.684	ENSCLAG00000011570	LARP4B	98	93.684	Chinchilla_lanigera
ENSODEG00000001109	LARP4B	65	90.323	ENSCHOG00000007831	-	66	90.323	Choloepus_hoffmanni
ENSODEG00000001109	LARP4B	100	72.230	ENSCPBG00000017063	LARP4B	100	72.230	Chrysemys_picta_bellii
ENSODEG00000001109	LARP4B	100	86.316	ENSCANG00000038021	LARP4B	100	82.520	Colobus_angolensis_palliatus
ENSODEG00000001109	LARP4B	100	91.579	ENSCGRG00001022930	Larp4b	100	87.160	Cricetulus_griseus_chok1gshd
ENSODEG00000001109	LARP4B	100	91.579	ENSCGRG00000006022	Larp4b	100	87.160	Cricetulus_griseus_crigri
ENSODEG00000001109	LARP4B	100	49.273	ENSCSEG00000007342	LARP4B	100	49.406	Cynoglossus_semilaevis
ENSODEG00000001109	LARP4B	100	51.314	ENSCVAG00000008910	LARP4B	100	52.070	Cyprinodon_variegatus
ENSODEG00000001109	LARP4B	90	48.617	ENSDARG00000062146	larp4b	91	49.637	Danio_rerio
ENSODEG00000001109	LARP4B	93	90.526	ENSDNOG00000045543	-	100	84.879	Dasypus_novemcinctus
ENSODEG00000001109	LARP4B	100	91.579	ENSDORG00000009328	Larp4b	100	91.579	Dipodomys_ordii
ENSODEG00000001109	LARP4B	83	89.076	ENSETEG00000011249	LARP4B	91	82.759	Echinops_telfairi
ENSODEG00000001109	LARP4B	100	81.867	ENSEASG00005019068	-	100	81.867	Equus_asinus_asinus
ENSODEG00000001109	LARP4B	100	81.732	ENSECAG00000024040	LARP4B	100	81.732	Equus_caballus
ENSODEG00000001109	LARP4B	100	78.302	ENSEEUG00000008391	LARP4B	98	78.302	Erinaceus_europaeus
ENSODEG00000001109	LARP4B	86	43.317	ENSELUG00000001417	-	94	37.349	Esox_lucius
ENSODEG00000001109	LARP4B	100	57.947	ENSELUG00000008626	LARP4B	100	52.861	Esox_lucius
ENSODEG00000001109	LARP4B	100	82.923	ENSFCAG00000000721	-	100	80.567	Felis_catus
ENSODEG00000001109	LARP4B	100	76.842	ENSFALG00000006961	LARP4B	100	72.230	Ficedula_albicollis
ENSODEG00000001109	LARP4B	100	91.711	ENSFDAG00000006158	LARP4B	97	90.528	Fukomys_damarensis
ENSODEG00000001109	LARP4B	100	47.143	ENSFHEG00000013037	LARP4B	100	47.403	Fundulus_heteroclitus
ENSODEG00000001109	LARP4B	80	58.583	ENSGMOG00000010818	-	89	57.393	Gadus_morhua
ENSODEG00000001109	LARP4B	100	77.083	ENSGALG00000006672	LARP4B	100	72.074	Gallus_gallus
ENSODEG00000001109	LARP4B	100	52.842	ENSGACG00000017535	LARP4B	98	53.488	Gasterosteus_aculeatus
ENSODEG00000001109	LARP4B	91	73.353	ENSGAGG00000008598	LARP4B	100	73.353	Gopherus_agassizii
ENSODEG00000001109	LARP4B	100	86.316	ENSGGOG00000003572	LARP4B	100	84.282	Gorilla_gorilla
ENSODEG00000001109	LARP4B	100	58.632	ENSHBUG00000007535	LARP4B	100	52.875	Haplochromis_burtoni
ENSODEG00000001109	LARP4B	100	94.792	ENSHGLG00000012936	LARP4B	100	91.403	Heterocephalus_glaber_female
ENSODEG00000001109	LARP4B	88	72.881	ENSHGLG00100017261	-	100	72.881	Heterocephalus_glaber_male
ENSODEG00000001109	LARP4B	100	94.792	ENSHGLG00100016220	-	100	90.392	Heterocephalus_glaber_male
ENSODEG00000001109	LARP4B	99	55.797	ENSHCOG00000011581	LARP4B	89	50.691	Hippocampus_comes
ENSODEG00000001109	LARP4B	92	47.908	ENSIPUG00000009705	larp4b	93	47.763	Ictalurus_punctatus
ENSODEG00000001109	LARP4B	100	91.579	ENSSTOG00000000587	LARP4B	100	87.591	Ictidomys_tridecemlineatus
ENSODEG00000001109	LARP4B	100	90.526	ENSJJAG00000020847	Larp4b	100	85.095	Jaculus_jaculus
ENSODEG00000001109	LARP4B	100	58.574	ENSKMAG00000021674	LARP4B	100	52.941	Kryptolebias_marmoratus
ENSODEG00000001109	LARP4B	90	56.090	ENSLBEG00000025293	-	83	56.410	Labrus_bergylta
ENSODEG00000001109	LARP4B	90	66.148	ENSLACG00000009492	LARP4B	100	62.700	Latimeria_chalumnae
ENSODEG00000001109	LARP4B	100	64.666	ENSLOCG00000012290	larp4b	100	61.328	Lepisosteus_oculatus
ENSODEG00000001109	LARP4B	100	89.474	ENSLAFG00000015334	LARP4B	100	83.311	Loxodonta_africana
ENSODEG00000001109	LARP4B	100	86.316	ENSMFAG00000001766	LARP4B	100	82.385	Macaca_fascicularis
ENSODEG00000001109	LARP4B	100	86.316	ENSMMUG00000005279	LARP4B	100	84.553	Macaca_mulatta
ENSODEG00000001109	LARP4B	100	86.316	ENSMNEG00000014019	LARP4B	100	82.249	Macaca_nemestrina
ENSODEG00000001109	LARP4B	100	85.417	ENSMLEG00000035198	LARP4B	100	84.438	Mandrillus_leucophaeus
ENSODEG00000001109	LARP4B	100	56.720	ENSMAMG00000013742	LARP4B	100	51.930	Mastacembelus_armatus
ENSODEG00000001109	LARP4B	86	58.803	ENSMZEG00005006498	-	96	57.556	Maylandia_zebra
ENSODEG00000001109	LARP4B	90	59.923	ENSMZEG00005014594	-	100	53.333	Maylandia_zebra
ENSODEG00000001109	LARP4B	100	77.895	ENSMGAG00000005472	LARP4B	100	71.295	Meleagris_gallopavo
ENSODEG00000001109	LARP4B	100	87.764	ENSMAUG00000021657	Larp4b	100	88.421	Mesocricetus_auratus
ENSODEG00000001109	LARP4B	100	78.947	ENSMICG00000001301	LARP4B	100	77.778	Microcebus_murinus
ENSODEG00000001109	LARP4B	100	87.764	ENSMOCG00000021452	Larp4b	100	87.764	Microtus_ochrogaster
ENSODEG00000001109	LARP4B	84	75.862	ENSMMOG00000011253	-	93	75.862	Mola_mola
ENSODEG00000001109	LARP4B	100	72.115	ENSMODG00000005957	LARP4B	100	70.767	Monodelphis_domestica
ENSODEG00000001109	LARP4B	100	49.324	ENSMALG00000012432	LARP4B	100	50.744	Monopterus_albus
ENSODEG00000001109	LARP4B	100	86.687	MGP_CAROLIEiJ_G0018216	Larp4b	100	86.838	Mus_caroli
ENSODEG00000001109	LARP4B	100	86.995	ENSMUSG00000033499	Larp4b	100	86.995	Mus_musculus
ENSODEG00000001109	LARP4B	100	87.141	MGP_PahariEiJ_G0019266	Larp4b	100	87.141	Mus_pahari
ENSODEG00000001109	LARP4B	100	86.995	MGP_SPRETEiJ_G0019074	Larp4b	100	86.819	Mus_spretus
ENSODEG00000001109	LARP4B	100	82.570	ENSMPUG00000016220	LARP4B	97	80.785	Mustela_putorius_furo
ENSODEG00000001109	LARP4B	93	80.074	ENSMLUG00000005880	LARP4B	100	78.613	Myotis_lucifugus
ENSODEG00000001109	LARP4B	100	87.478	ENSNGAG00000001750	Larp4b	100	86.043	Nannospalax_galili
ENSODEG00000001109	LARP4B	84	75.862	ENSNBRG00000020018	LARP4B	93	75.862	Neolamprologus_brichardi
ENSODEG00000001109	LARP4B	100	85.263	ENSNLEG00000013442	LARP4B	100	84.282	Nomascus_leucogenys
ENSODEG00000001109	LARP4B	75	94.737	ENSMEUG00000013114	-	65	94.737	Notamacropus_eugenii
ENSODEG00000001109	LARP4B	100	94.737	ENSOPRG00000003300	LARP4B	90	94.737	Ochotona_princeps
ENSODEG00000001109	LARP4B	100	61.176	ENSONIG00000017705	LARP4B	100	55.385	Oreochromis_niloticus
ENSODEG00000001109	LARP4B	100	71.693	ENSOANG00000006100	LARP4B	100	71.825	Ornithorhynchus_anatinus
ENSODEG00000001109	LARP4B	100	85.151	ENSOCUG00000004950	LARP4B	97	85.151	Oryctolagus_cuniculus
ENSODEG00000001109	LARP4B	100	50.750	ENSORLG00000006080	LARP4B	100	51.000	Oryzias_latipes
ENSODEG00000001109	LARP4B	100	50.499	ENSORLG00020020940	LARP4B	100	50.623	Oryzias_latipes_hni
ENSODEG00000001109	LARP4B	100	50.628	ENSORLG00015020608	LARP4B	100	50.754	Oryzias_latipes_hsok
ENSODEG00000001109	LARP4B	100	54.855	ENSOMEG00000019619	LARP4B	100	49.938	Oryzias_melastigma
ENSODEG00000001109	LARP4B	93	83.333	ENSOGAG00000011540	LARP4B	100	80.286	Otolemur_garnettii
ENSODEG00000001109	LARP4B	100	78.763	ENSOARG00000015320	LARP4B	98	78.763	Ovis_aries
ENSODEG00000001109	LARP4B	100	86.316	ENSPPAG00000039232	LARP4B	100	84.146	Pan_paniscus
ENSODEG00000001109	LARP4B	100	82.746	ENSPPRG00000009489	LARP4B	100	80.650	Panthera_pardus
ENSODEG00000001109	LARP4B	100	82.570	ENSPTIG00000008543	LARP4B	100	80.514	Panthera_tigris_altaica
ENSODEG00000001109	LARP4B	100	86.316	ENSPTRG00000002235	LARP4B	100	84.146	Pan_troglodytes
ENSODEG00000001109	LARP4B	100	86.316	ENSPANG00000023546	LARP4B	100	82.385	Papio_anubis
ENSODEG00000001109	LARP4B	97	53.028	ENSPKIG00000012368	LARP4B	97	53.836	Paramormyrops_kingsleyae
ENSODEG00000001109	LARP4B	85	86.218	ENSPSIG00000005600	LARP4B	99	86.218	Pelodiscus_sinensis
ENSODEG00000001109	LARP4B	92	51.970	ENSPMGG00000008261	LARP4B	87	51.970	Periophthalmus_magnuspinnatus
ENSODEG00000001109	LARP4B	100	86.585	ENSPEMG00000014052	Larp4b	100	86.585	Peromyscus_maniculatus_bairdii
ENSODEG00000001109	LARP4B	100	55.987	ENSPFOG00000000029	LARP4B	100	51.235	Poecilia_formosa
ENSODEG00000001109	LARP4B	100	55.987	ENSPLAG00000002871	LARP4B	100	52.021	Poecilia_latipinna
ENSODEG00000001109	LARP4B	100	55.897	ENSPMEG00000016361	LARP4B	100	51.295	Poecilia_mexicana
ENSODEG00000001109	LARP4B	100	84.303	ENSPPYG00000002035	LARP4B	97	84.303	Pongo_abelii
ENSODEG00000001109	LARP4B	100	83.598	ENSPCOG00000014688	LARP4B	100	82.791	Propithecus_coquereli
ENSODEG00000001109	LARP4B	85	97.143	ENSPVAG00000009784	LARP4B	88	97.143	Pteropus_vampyrus
ENSODEG00000001109	LARP4B	100	59.316	ENSPNYG00000024252	LARP4B	100	53.375	Pundamilia_nyererei
ENSODEG00000001109	LARP4B	94	49.164	ENSPNAG00000028956	larp4b	95	49.025	Pygocentrus_nattereri
ENSODEG00000001109	LARP4B	99	87.302	ENSRNOG00000015888	Larp4b	100	86.179	Rattus_norvegicus
ENSODEG00000001109	LARP4B	100	86.316	ENSRBIG00000033294	LARP4B	100	84.282	Rhinopithecus_bieti
ENSODEG00000001109	LARP4B	100	86.316	ENSRROG00000033879	LARP4B	100	84.011	Rhinopithecus_roxellana
ENSODEG00000001109	LARP4B	100	84.211	ENSSBOG00000021109	LARP4B	100	79.945	Saimiri_boliviensis_boliviensis
ENSODEG00000001109	LARP4B	100	73.469	ENSSHAG00000013392	LARP4B	100	72.727	Sarcophilus_harrisii
ENSODEG00000001109	LARP4B	91	56.484	ENSSFOG00015003256	LARP4B	90	54.631	Scleropages_formosus
ENSODEG00000001109	LARP4B	81	79.310	ENSSMAG00000005982	-	99	79.310	Scophthalmus_maximus
ENSODEG00000001109	LARP4B	100	52.736	ENSSDUG00000006704	LARP4B	100	53.234	Seriola_dumerili
ENSODEG00000001109	LARP4B	87	75.862	ENSSLDG00000020660	LARP4B	99	75.862	Seriola_lalandi_dorsalis
ENSODEG00000001109	LARP4B	61	93.333	ENSSARG00000001243	-	73	93.333	Sorex_araneus
ENSODEG00000001109	LARP4B	100	59.253	ENSSPUG00000013734	-	91	75.552	Sphenodon_punctatus
ENSODEG00000001109	LARP4B	100	70.445	ENSSPUG00000002102	-	100	69.636	Sphenodon_punctatus
ENSODEG00000001109	LARP4B	100	55.904	ENSSPAG00000014628	LARP4B	100	52.022	Stegastes_partitus
ENSODEG00000001109	LARP4B	100	77.808	ENSSSCG00000011162	LARP4B	100	79.934	Sus_scrofa
ENSODEG00000001109	LARP4B	100	77.895	ENSTGUG00000000811	-	100	72.788	Taeniopygia_guttata
ENSODEG00000001109	LARP4B	100	59.569	ENSTNIG00000004571	-	98	53.299	Tetraodon_nigroviridis
ENSODEG00000001109	LARP4B	95	59.466	ENSTNIG00000007991	LARP4B	99	51.681	Tetraodon_nigroviridis
ENSODEG00000001109	LARP4B	90	83.333	ENSTTRG00000011151	LARP4B	90	83.333	Tursiops_truncatus
ENSODEG00000001109	LARP4B	88	82.000	ENSUAMG00000016461	LARP4B	95	82.000	Ursus_americanus
ENSODEG00000001109	LARP4B	100	83.451	ENSUMAG00000016127	LARP4B	100	81.867	Ursus_maritimus
ENSODEG00000001109	LARP4B	56	85.106	ENSVPAG00000000128	-	73	85.106	Vicugna_pacos
ENSODEG00000001109	LARP4B	100	82.923	ENSVVUG00000008641	LARP4B	100	81.326	Vulpes_vulpes
ENSODEG00000001109	LARP4B	99	69.707	ENSXETG00000016882	larp4b	100	66.358	Xenopus_tropicalis
ENSODEG00000001109	LARP4B	100	50.390	ENSXCOG00000019952	LARP4B	100	50.518	Xiphophorus_couchianus
ENSODEG00000001109	LARP4B	100	55.663	ENSXMAG00000021533	LARP4B	100	52.065	Xiphophorus_maculatus