EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001116 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 721 bases
Position: chrJH651618.1:24729-25449
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000001423	SBDS	PF01172.18	2.1e-18	1	1
ENSODEP00000001423	SBDS_C	PF09377.10	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000001458	-	702	-	ENSODEP00000001423	233 (aa)	-	-

Gene Model

Click here to download ENSODEG00000001116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001116	-	99	62.097	ENSODEG00000000137	-	84	61.694
ENSODEG00000001116	-	99	71.888	ENSODEG00000019253	-	84	71.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001116	-	99	77.510	ENSG00000126524	SBDS	97	81.928	Homo_sapiens
ENSODEG00000001116	-	99	66.265	ENSAPOG00000014285	sbds	100	66.265	Acanthochromis_polyacanthus
ENSODEG00000001116	-	99	77.108	ENSAMEG00000018167	SBDS	99	77.108	Ailuropoda_melanoleuca
ENSODEG00000001116	-	99	65.873	ENSACIG00000007308	sbds	100	65.873	Amphilophus_citrinellus
ENSODEG00000001116	-	99	66.265	ENSAOCG00000016770	sbds	100	66.265	Amphiprion_ocellaris
ENSODEG00000001116	-	99	66.667	ENSAPEG00000015897	sbds	100	66.667	Amphiprion_percula
ENSODEG00000001116	-	99	65.863	ENSATEG00000006901	sbds	100	65.863	Anabas_testudineus
ENSODEG00000001116	-	92	71.861	ENSANAG00000024342	-	97	71.861	Aotus_nancymaae
ENSODEG00000001116	-	81	75.728	ENSANAG00000037501	-	99	75.728	Aotus_nancymaae
ENSODEG00000001116	-	99	67.068	ENSACLG00000018750	sbds	100	67.068	Astatotilapia_calliptera
ENSODEG00000001116	-	99	67.068	ENSAMXG00000005361	sbds	99	67.068	Astyanax_mexicanus
ENSODEG00000001116	-	99	77.510	ENSBTAG00000004051	SBDS	99	77.510	Bos_taurus
ENSODEG00000001116	-	98	45.935	WBGene00021063	sbds-1	97	45.935	Caenorhabditis_elegans
ENSODEG00000001116	-	99	77.108	ENSCJAG00000041007	SBDS	99	77.108	Callithrix_jacchus
ENSODEG00000001116	-	99	75.299	ENSCAFG00000010797	SBDS	99	75.299	Canis_familiaris
ENSODEG00000001116	-	99	76.707	ENSCAFG00020005357	SBDS	99	76.707	Canis_lupus_dingo
ENSODEG00000001116	-	99	77.510	ENSCHIG00000026854	SBDS	99	77.510	Capra_hircus
ENSODEG00000001116	-	99	77.510	ENSTSYG00000033822	SBDS	99	77.510	Carlito_syrichta
ENSODEG00000001116	-	63	76.074	ENSCAPG00000006634	SBDS	99	76.074	Cavia_aperea
ENSODEG00000001116	-	99	77.912	ENSCPOG00000036143	SBDS	99	77.912	Cavia_porcellus
ENSODEG00000001116	-	99	77.108	ENSCCAG00000020671	SBDS	99	77.108	Cebus_capucinus
ENSODEG00000001116	-	99	77.510	ENSCATG00000039026	SBDS	99	77.510	Cercocebus_atys
ENSODEG00000001116	-	99	60.976	ENSCLAG00000002113	-	99	60.976	Chinchilla_lanigera
ENSODEG00000001116	-	99	77.510	ENSCLAG00000005721	-	99	77.510	Chinchilla_lanigera
ENSODEG00000001116	-	99	77.510	ENSCSAG00000018275	SBDS	99	77.510	Chlorocebus_sabaeus
ENSODEG00000001116	-	99	75.000	ENSCHOG00000003795	SBDS	99	75.000	Choloepus_hoffmanni
ENSODEG00000001116	-	99	71.084	ENSCPBG00000014893	SBDS	99	71.084	Chrysemys_picta_bellii
ENSODEG00000001116	-	99	51.613	ENSCSAVG00000011811	-	99	51.613	Ciona_savignyi
ENSODEG00000001116	-	99	77.108	ENSCANG00000032368	SBDS	99	77.108	Colobus_angolensis_palliatus
ENSODEG00000001116	-	63	74.847	ENSCGRG00001019886	Sbds	99	74.847	Cricetulus_griseus_chok1gshd
ENSODEG00000001116	-	81	75.728	ENSCGRG00000009211	Sbds	99	75.728	Cricetulus_griseus_crigri
ENSODEG00000001116	-	99	63.855	ENSCSEG00000005798	sbds	100	63.855	Cynoglossus_semilaevis
ENSODEG00000001116	-	99	64.257	ENSCVAG00000001053	sbds	100	64.257	Cyprinodon_variegatus
ENSODEG00000001116	-	99	66.667	ENSDARG00000027803	sbds	99	66.667	Danio_rerio
ENSODEG00000001116	-	99	77.912	ENSDNOG00000041174	SBDS	99	77.912	Dasypus_novemcinctus
ENSODEG00000001116	-	99	76.707	ENSDORG00000026218	Sbds	99	76.707	Dipodomys_ordii
ENSODEG00000001116	-	90	45.614	FBgn0035714	CG8549	98	45.749	Drosophila_melanogaster
ENSODEG00000001116	-	82	48.804	ENSEBUG00000015780	sbds	92	49.515	Eptatretus_burgeri
ENSODEG00000001116	-	99	77.912	ENSEASG00005008821	SBDS	99	77.912	Equus_asinus_asinus
ENSODEG00000001116	-	99	77.912	ENSECAG00000008202	SBDS	99	77.912	Equus_caballus
ENSODEG00000001116	-	82	60.096	ENSEEUG00000004768	SBDS	100	60.096	Erinaceus_europaeus
ENSODEG00000001116	-	99	64.659	ENSELUG00000008382	sbds	99	64.659	Esox_lucius
ENSODEG00000001116	-	99	77.510	ENSFCAG00000022142	SBDS	99	77.510	Felis_catus
ENSODEG00000001116	-	99	71.888	ENSFALG00000013808	SBDS	99	71.888	Ficedula_albicollis
ENSODEG00000001116	-	99	77.912	ENSFDAG00000018947	-	99	77.912	Fukomys_damarensis
ENSODEG00000001116	-	99	61.847	ENSFHEG00000000708	sbds	100	61.847	Fundulus_heteroclitus
ENSODEG00000001116	-	99	64.659	ENSGMOG00000018356	sbds	99	64.659	Gadus_morhua
ENSODEG00000001116	-	99	71.084	ENSGALG00000027989	SBDS	99	71.084	Gallus_gallus
ENSODEG00000001116	-	91	61.304	ENSGAFG00000014204	sbds	100	61.304	Gambusia_affinis
ENSODEG00000001116	-	99	65.060	ENSGACG00000012697	sbds	100	65.060	Gasterosteus_aculeatus
ENSODEG00000001116	-	84	70.423	ENSGAGG00000022402	SBDS	99	70.423	Gopherus_agassizii
ENSODEG00000001116	-	96	61.667	ENSGGOG00000040023	-	92	61.667	Gorilla_gorilla
ENSODEG00000001116	-	99	67.068	ENSHBUG00000002660	sbds	100	67.068	Haplochromis_burtoni
ENSODEG00000001116	-	99	76.305	ENSHGLG00000009671	SBDS	99	76.305	Heterocephalus_glaber_female
ENSODEG00000001116	-	99	76.305	ENSHGLG00100011332	SBDS	99	76.305	Heterocephalus_glaber_male
ENSODEG00000001116	-	99	63.454	ENSHCOG00000018606	sbds	100	63.454	Hippocampus_comes
ENSODEG00000001116	-	99	66.667	ENSIPUG00000006536	sbds	99	66.667	Ictalurus_punctatus
ENSODEG00000001116	-	99	59.244	ENSJJAG00000003934	-	99	59.244	Jaculus_jaculus
ENSODEG00000001116	-	98	75.510	ENSJJAG00000012033	-	98	75.510	Jaculus_jaculus
ENSODEG00000001116	-	99	66.265	ENSKMAG00000018542	sbds	100	66.265	Kryptolebias_marmoratus
ENSODEG00000001116	-	99	63.052	ENSLBEG00000016687	sbds	100	63.052	Labrus_bergylta
ENSODEG00000001116	-	99	55.777	ENSLACG00000018916	SBDS	99	55.777	Latimeria_chalumnae
ENSODEG00000001116	-	99	69.076	ENSLOCG00000004073	sbds	99	69.076	Lepisosteus_oculatus
ENSODEG00000001116	-	99	76.707	ENSLAFG00000008763	SBDS	99	76.707	Loxodonta_africana
ENSODEG00000001116	-	99	77.510	ENSMFAG00000032620	SBDS	99	77.510	Macaca_fascicularis
ENSODEG00000001116	-	99	77.510	ENSMMUG00000045653	SBDS	99	77.510	Macaca_mulatta
ENSODEG00000001116	-	99	77.510	ENSMNEG00000031523	SBDS	99	77.510	Macaca_nemestrina
ENSODEG00000001116	-	99	61.925	ENSMLEG00000036826	SBDS	99	61.134	Mandrillus_leucophaeus
ENSODEG00000001116	-	99	66.667	ENSMAMG00000016062	sbds	100	66.667	Mastacembelus_armatus
ENSODEG00000001116	-	99	67.068	ENSMZEG00005024385	sbds	100	67.068	Maylandia_zebra
ENSODEG00000001116	-	99	71.084	ENSMGAG00000002119	SBDS	99	71.084	Meleagris_gallopavo
ENSODEG00000001116	-	99	61.847	ENSMAUG00000022214	-	100	61.847	Mesocricetus_auratus
ENSODEG00000001116	-	99	77.510	ENSMICG00000014366	SBDS	99	77.510	Microcebus_murinus
ENSODEG00000001116	-	99	77.108	ENSMOCG00000011739	Sbds	99	77.108	Microtus_ochrogaster
ENSODEG00000001116	-	99	58.800	ENSMMOG00000005061	sbds	100	58.431	Mola_mola
ENSODEG00000001116	-	99	75.502	ENSMODG00000006644	SBDS	99	75.502	Monodelphis_domestica
ENSODEG00000001116	-	99	66.265	ENSMALG00000010219	sbds	100	66.265	Monopterus_albus
ENSODEG00000001116	-	99	77.108	MGP_CAROLIEiJ_G0027800	Sbds	100	81.395	Mus_caroli
ENSODEG00000001116	-	99	76.707	ENSMUSG00000025337	Sbds	100	81.395	Mus_musculus
ENSODEG00000001116	-	99	77.510	MGP_PahariEiJ_G0024384	Sbds	100	81.395	Mus_pahari
ENSODEG00000001116	-	99	76.707	MGP_SPRETEiJ_G0028798	Sbds	100	81.395	Mus_spretus
ENSODEG00000001116	-	65	72.455	ENSMPUG00000016192	SBDS	96	72.455	Mustela_putorius_furo
ENSODEG00000001116	-	71	75.138	ENSMLUG00000013575	SBDS	99	75.138	Myotis_lucifugus
ENSODEG00000001116	-	99	77.912	ENSNGAG00000012093	Sbds	99	77.912	Nannospalax_galili
ENSODEG00000001116	-	99	67.068	ENSNBRG00000017027	sbds	100	67.068	Neolamprologus_brichardi
ENSODEG00000001116	-	99	77.510	ENSNLEG00000013288	SBDS	99	77.510	Nomascus_leucogenys
ENSODEG00000001116	-	99	75.100	ENSOPRG00000008721	SBDS	99	75.100	Ochotona_princeps
ENSODEG00000001116	-	99	67.068	ENSONIG00000005874	sbds	100	67.068	Oreochromis_niloticus
ENSODEG00000001116	-	80	71.569	ENSOANG00000007674	-	99	71.569	Ornithorhynchus_anatinus
ENSODEG00000001116	-	99	75.904	ENSOCUG00000003170	SBDS	99	75.904	Oryctolagus_cuniculus
ENSODEG00000001116	-	99	62.651	ENSORLG00000023489	sbds	100	62.651	Oryzias_latipes
ENSODEG00000001116	-	99	62.249	ENSORLG00020019282	sbds	100	62.249	Oryzias_latipes_hni
ENSODEG00000001116	-	99	62.249	ENSORLG00015008005	sbds	100	62.249	Oryzias_latipes_hsok
ENSODEG00000001116	-	99	63.052	ENSOMEG00000022747	sbds	100	63.052	Oryzias_melastigma
ENSODEG00000001116	-	89	70.536	ENSOGAG00000015036	-	90	70.536	Otolemur_garnettii
ENSODEG00000001116	-	99	77.108	ENSOGAG00000009011	-	99	77.108	Otolemur_garnettii
ENSODEG00000001116	-	99	77.510	ENSOARG00000010609	SBDS	99	77.510	Ovis_aries
ENSODEG00000001116	-	99	77.108	ENSPPAG00000043889	-	99	77.108	Pan_paniscus
ENSODEG00000001116	-	99	77.510	ENSPPRG00000002307	SBDS	99	77.510	Panthera_pardus
ENSODEG00000001116	-	99	77.510	ENSPTIG00000021308	SBDS	99	77.510	Panthera_tigris_altaica
ENSODEG00000001116	-	99	66.532	ENSPTRG00000047744	-	99	66.532	Pan_troglodytes
ENSODEG00000001116	-	99	66.129	ENSPTRG00000050835	-	99	66.129	Pan_troglodytes
ENSODEG00000001116	-	86	76.037	ENSPTRG00000048174	-	96	76.037	Pan_troglodytes
ENSODEG00000001116	-	99	77.510	ENSPTRG00000019254	SBDS	99	77.510	Pan_troglodytes
ENSODEG00000001116	-	99	77.108	ENSPANG00000004078	SBDS	99	77.108	Papio_anubis
ENSODEG00000001116	-	99	67.068	ENSPKIG00000006489	sbds	99	67.068	Paramormyrops_kingsleyae
ENSODEG00000001116	-	81	70.874	ENSPSIG00000014603	SBDS	99	70.874	Pelodiscus_sinensis
ENSODEG00000001116	-	99	65.060	ENSPMGG00000004246	sbds	100	65.060	Periophthalmus_magnuspinnatus
ENSODEG00000001116	-	99	78.313	ENSPEMG00000008728	Sbds	99	78.313	Peromyscus_maniculatus_bairdii
ENSODEG00000001116	-	99	74.699	ENSPCIG00000029718	SBDS	99	74.699	Phascolarctos_cinereus
ENSODEG00000001116	-	99	63.454	ENSPFOG00000015837	sbds	100	63.454	Poecilia_formosa
ENSODEG00000001116	-	99	63.454	ENSPLAG00000003641	sbds	100	63.454	Poecilia_latipinna
ENSODEG00000001116	-	99	63.454	ENSPMEG00000019483	sbds	100	63.454	Poecilia_mexicana
ENSODEG00000001116	-	99	63.454	ENSPREG00000018758	sbds	100	63.454	Poecilia_reticulata
ENSODEG00000001116	-	99	77.510	ENSPPYG00000017513	SBDS	99	77.510	Pongo_abelii
ENSODEG00000001116	-	99	77.510	ENSPCOG00000021098	SBDS	99	77.510	Propithecus_coquereli
ENSODEG00000001116	-	99	77.510	ENSPVAG00000009369	SBDS	99	77.510	Pteropus_vampyrus
ENSODEG00000001116	-	99	67.470	ENSPNYG00000022403	sbds	100	67.470	Pundamilia_nyererei
ENSODEG00000001116	-	99	67.470	ENSPNAG00000001120	sbds	99	67.470	Pygocentrus_nattereri
ENSODEG00000001116	-	99	76.707	ENSRNOG00000000888	Sbds	99	76.707	Rattus_norvegicus
ENSODEG00000001116	-	99	77.510	ENSRBIG00000035557	SBDS	99	77.510	Rhinopithecus_bieti
ENSODEG00000001116	-	99	77.510	ENSRROG00000040842	-	99	77.510	Rhinopithecus_roxellana
ENSODEG00000001116	-	99	63.158	ENSRROG00000041986	-	99	61.134	Rhinopithecus_roxellana
ENSODEG00000001116	-	92	34.454	YLR022C	-	70	37.714	Saccharomyces_cerevisiae
ENSODEG00000001116	-	91	76.957	ENSSBOG00000022460	SBDS	99	76.957	Saimiri_boliviensis_boliviensis
ENSODEG00000001116	-	99	65.323	ENSSHAG00000010263	SBDS	99	65.323	Sarcophilus_harrisii
ENSODEG00000001116	-	99	67.871	ENSSFOG00015001108	sbds	99	67.871	Scleropages_formosus
ENSODEG00000001116	-	99	66.265	ENSSMAG00000020506	sbds	100	66.265	Scophthalmus_maximus
ENSODEG00000001116	-	99	65.863	ENSSDUG00000001528	sbds	100	65.863	Seriola_dumerili
ENSODEG00000001116	-	99	66.265	ENSSLDG00000003659	sbds	100	66.265	Seriola_lalandi_dorsalis
ENSODEG00000001116	-	76	80.233	ENSSARG00000001899	-	71	80.233	Sorex_araneus
ENSODEG00000001116	-	61	77.778	ENSSARG00000013132	-	100	77.778	Sorex_araneus
ENSODEG00000001116	-	99	70.281	ENSSPUG00000002699	SBDS	99	70.281	Sphenodon_punctatus
ENSODEG00000001116	-	99	66.265	ENSSPAG00000016419	sbds	100	62.097	Stegastes_partitus
ENSODEG00000001116	-	99	77.108	ENSSSCG00000007732	SBDS	99	77.108	Sus_scrofa
ENSODEG00000001116	-	63	69.939	ENSTGUG00000003426	SBDS	98	69.939	Taeniopygia_guttata
ENSODEG00000001116	-	99	65.863	ENSTRUG00000021443	sbds	100	65.863	Takifugu_rubripes
ENSODEG00000001116	-	99	65.863	ENSTNIG00000019000	sbds	100	65.863	Tetraodon_nigroviridis
ENSODEG00000001116	-	82	69.118	ENSTBEG00000001178	SBDS	100	69.118	Tupaia_belangeri
ENSODEG00000001116	-	99	63.454	ENSTTRG00000003921	SBDS	99	63.454	Tursiops_truncatus
ENSODEG00000001116	-	99	77.108	ENSUAMG00000001326	SBDS	99	77.108	Ursus_americanus
ENSODEG00000001116	-	99	77.108	ENSUMAG00000015353	SBDS	99	77.108	Ursus_maritimus
ENSODEG00000001116	-	99	76.707	ENSVVUG00000016478	SBDS	99	76.707	Vulpes_vulpes
ENSODEG00000001116	-	99	68.675	ENSXETG00000010093	sbds	99	68.675	Xenopus_tropicalis
ENSODEG00000001116	-	99	59.036	ENSXCOG00000010639	sbds	100	59.036	Xiphophorus_couchianus
ENSODEG00000001116	-	99	63.855	ENSXMAG00000006065	sbds	100	63.855	Xiphophorus_maculatus