EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001143 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 2387 bases
Position: chrJH651706.1:3486486-3488872
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000001456	tRNA-synt_1c_C	PF03950.18	1.2e-39	1	1
ENSODEP00000001458	tRNA-synt_1c_C	PF03950.18	1.7e-39	1	1
ENSODEP00000001457	tRNA-synt_1c_C	PF03950.18	1.8e-39	1	1
ENSODEP00000001457	tRNA_synt_1c_R2	PF04557.15	1.7e-26	1	1
ENSODEP00000001456	tRNA_synt_1c_R2	PF04557.15	4.1e-22	1	1
ENSODEP00000001459	tRNA_synt_1c_R2	PF04557.15	1.6e-14	1	1
ENSODEP00000001458	tRNA_synt_1c_R2	PF04557.15	6.1e-13	1	1
ENSODEP00000001459	tRNA_synt_1c_R1	PF04558.15	1.8e-48	1	1
ENSODEP00000001458	tRNA_synt_1c_R1	PF04558.15	1.7e-47	1	1
ENSODEP00000001457	tRNA_synt_1c_R1	PF04558.15	1.8e-47	1	1
ENSODEP00000001456	tRNA-synt_1c	PF00749.21	2e-108	1	1
ENSODEP00000001458	tRNA-synt_1c	PF00749.21	3e-108	1	1
ENSODEP00000001457	tRNA-synt_1c	PF00749.21	3.2e-108	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000001494	-	762	-	ENSODEP00000001459	253 (aa)	-	-
ENSODET00000001491	-	1812	-	ENSODEP00000001456	603 (aa)	-	-
ENSODET00000001492	-	2316	-	ENSODEP00000001457	771 (aa)	-	-
ENSODET00000001493	-	2247	-	ENSODEP00000001458	748 (aa)	-	-

Gene Model

Click here to download ENSODEG00000001143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001143	-	100	96.671	ENSODEG00000018381	-	100	96.671

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001143	-	99	88.501	ENSG00000172053	QARS	99	92.262	Homo_sapiens
ENSODEG00000001143	-	99	73.554	ENSAPOG00000000838	qars	99	71.850	Acanthochromis_polyacanthus
ENSODEG00000001143	-	99	89.552	ENSAMEG00000012838	QARS	99	89.147	Ailuropoda_melanoleuca
ENSODEG00000001143	-	99	71.642	ENSACIG00000022417	qars	99	70.933	Amphilophus_citrinellus
ENSODEG00000001143	-	99	71.429	ENSAOCG00000004800	qars	99	71.429	Amphiprion_ocellaris
ENSODEG00000001143	-	99	70.878	ENSAPEG00000012849	qars	99	70.878	Amphiprion_percula
ENSODEG00000001143	-	99	73.597	ENSATEG00000008797	qars	99	71.318	Anabas_testudineus
ENSODEG00000001143	-	99	64.298	ENSAPLG00000007248	QARS	99	64.580	Anas_platyrhynchos
ENSODEG00000001143	-	99	77.318	ENSACAG00000012645	QARS	99	75.128	Anolis_carolinensis
ENSODEG00000001143	-	99	88.282	ENSANAG00000031868	-	99	88.282	Aotus_nancymaae
ENSODEG00000001143	-	95	74.380	ENSANAG00000028366	-	96	78.744	Aotus_nancymaae
ENSODEG00000001143	-	99	75.537	ENSAMXG00000014553	qars	99	74.127	Astyanax_mexicanus
ENSODEG00000001143	-	99	89.552	ENSBTAG00000018928	QARS	99	88.760	Bos_taurus
ENSODEG00000001143	-	99	88.391	ENSCJAG00000003457	QARS	99	88.372	Callithrix_jacchus
ENSODEG00000001143	-	99	90.050	ENSCAFG00000011846	QARS	99	89.664	Canis_familiaris
ENSODEG00000001143	-	99	90.050	ENSCAFG00020020980	QARS	99	89.664	Canis_lupus_dingo
ENSODEG00000001143	-	99	89.867	ENSCHIG00000022953	QARS	99	88.889	Capra_hircus
ENSODEG00000001143	-	99	88.501	ENSTSYG00000008462	QARS	99	88.501	Carlito_syrichta
ENSODEG00000001143	-	100	90.956	ENSCPOG00000009967	QARS	100	90.956	Cavia_porcellus
ENSODEG00000001143	-	95	76.033	ENSCCAG00000031010	-	99	78.194	Cebus_capucinus
ENSODEG00000001143	-	99	86.744	ENSCCAG00000037772	-	99	86.744	Cebus_capucinus
ENSODEG00000001143	-	99	78.636	ENSCCAG00000034381	-	99	78.636	Cebus_capucinus
ENSODEG00000001143	-	99	88.549	ENSCATG00000037275	QARS	99	88.549	Cercocebus_atys
ENSODEG00000001143	-	100	93.152	ENSCLAG00000009982	QARS	100	93.152	Chinchilla_lanigera
ENSODEG00000001143	-	99	88.243	ENSCSAG00000015198	QARS	99	88.243	Chlorocebus_sabaeus
ENSODEG00000001143	-	99	81.095	ENSCHOG00000001084	QARS	92	81.894	Choloepus_hoffmanni
ENSODEG00000001143	-	99	78.405	ENSCPBG00000008614	QARS	99	77.332	Chrysemys_picta_bellii
ENSODEG00000001143	-	99	88.815	ENSCANG00000034041	QARS	99	88.815	Colobus_angolensis_palliatus
ENSODEG00000001143	-	99	88.682	ENSCGRG00001021363	Qars	99	88.682	Cricetulus_griseus_chok1gshd
ENSODEG00000001143	-	99	88.682	ENSCGRG00000006805	Qars	99	88.682	Cricetulus_griseus_crigri
ENSODEG00000001143	-	99	71.264	ENSCSEG00000021387	qars	100	70.159	Cynoglossus_semilaevis
ENSODEG00000001143	-	99	74.257	ENSCVAG00000012209	qars	99	71.576	Cyprinodon_variegatus
ENSODEG00000001143	-	99	74.007	ENSDARG00000010316	qars	99	71.244	Danio_rerio
ENSODEG00000001143	-	99	88.538	ENSDNOG00000014157	QARS	94	87.710	Dasypus_novemcinctus
ENSODEG00000001143	-	97	80.081	ENSDORG00000007392	-	91	80.081	Dipodomys_ordii
ENSODEG00000001143	-	92	72.222	ENSETEG00000006900	QARS	88	86.772	Echinops_telfairi
ENSODEG00000001143	-	90	63.091	ENSEBUG00000010287	qars	93	57.692	Eptatretus_burgeri
ENSODEG00000001143	-	99	88.411	ENSEASG00005010497	QARS	99	88.129	Equus_asinus_asinus
ENSODEG00000001143	-	99	88.742	ENSECAG00000000809	QARS	99	88.387	Equus_caballus
ENSODEG00000001143	-	96	84.418	ENSEEUG00000004666	QARS	99	80.103	Erinaceus_europaeus
ENSODEG00000001143	-	99	72.893	ENSELUG00000024142	qars	99	70.893	Esox_lucius
ENSODEG00000001143	-	99	89.718	ENSFCAG00000009846	QARS	99	89.276	Felis_catus
ENSODEG00000001143	-	99	78.073	ENSFALG00000013066	QARS	99	75.781	Ficedula_albicollis
ENSODEG00000001143	-	100	91.214	ENSFDAG00000010076	QARS	100	91.214	Fukomys_damarensis
ENSODEG00000001143	-	99	73.597	ENSFHEG00000003621	qars	99	70.747	Fundulus_heteroclitus
ENSODEG00000001143	-	99	72.862	ENSGMOG00000016875	qars	99	70.103	Gadus_morhua
ENSODEG00000001143	-	99	78.073	ENSGALG00000029980	QARS	93	75.000	Gallus_gallus
ENSODEG00000001143	-	99	73.927	ENSGAFG00000021070	qars	99	71.658	Gambusia_affinis
ENSODEG00000001143	-	99	72.222	ENSGACG00000002887	qars	99	70.641	Gasterosteus_aculeatus
ENSODEG00000001143	-	68	66.854	ENSGAGG00000002132	-	88	66.854	Gopherus_agassizii
ENSODEG00000001143	-	99	88.415	ENSGGOG00000014882	QARS	99	88.415	Gorilla_gorilla
ENSODEG00000001143	-	99	72.937	ENSHBUG00000000168	qars	99	71.318	Haplochromis_burtoni
ENSODEG00000001143	-	100	92.011	ENSHGLG00000014071	QARS	100	92.011	Heterocephalus_glaber_female
ENSODEG00000001143	-	100	91.877	ENSHGLG00100014107	QARS	100	91.877	Heterocephalus_glaber_male
ENSODEG00000001143	-	100	72.204	ENSHCOG00000008150	qars	99	69.728	Hippocampus_comes
ENSODEG00000001143	-	99	73.300	ENSIPUG00000022101	qars	93	71.336	Ictalurus_punctatus
ENSODEG00000001143	-	99	89.880	ENSSTOG00000001822	QARS	99	89.880	Ictidomys_tridecemlineatus
ENSODEG00000001143	-	99	85.788	ENSJJAG00000010985	Qars	99	85.788	Jaculus_jaculus
ENSODEG00000001143	-	99	73.432	ENSKMAG00000015716	qars	99	71.318	Kryptolebias_marmoratus
ENSODEG00000001143	-	98	70.470	ENSLBEG00000008312	qars	99	68.758	Labrus_bergylta
ENSODEG00000001143	-	99	75.914	ENSLACG00000005667	QARS	100	72.938	Latimeria_chalumnae
ENSODEG00000001143	-	99	76.451	ENSLOCG00000014502	qars	99	73.930	Lepisosteus_oculatus
ENSODEG00000001143	-	99	87.396	ENSLAFG00000012841	QARS	99	87.339	Loxodonta_africana
ENSODEG00000001143	-	99	88.549	ENSMFAG00000033478	QARS	99	88.549	Macaca_fascicularis
ENSODEG00000001143	-	99	88.549	ENSMMUG00000002943	QARS	99	88.549	Macaca_mulatta
ENSODEG00000001143	-	99	88.549	ENSMNEG00000035096	QARS	99	88.549	Macaca_nemestrina
ENSODEG00000001143	-	99	88.415	ENSMLEG00000042334	QARS	99	88.415	Mandrillus_leucophaeus
ENSODEG00000001143	-	99	73.762	ENSMAMG00000012801	qars	99	71.835	Mastacembelus_armatus
ENSODEG00000001143	-	99	72.937	ENSMZEG00005024193	qars	99	71.318	Maylandia_zebra
ENSODEG00000001143	-	99	78.073	ENSMGAG00000008134	QARS	99	77.778	Meleagris_gallopavo
ENSODEG00000001143	-	99	89.147	ENSMAUG00000022218	Qars	99	89.147	Mesocricetus_auratus
ENSODEG00000001143	-	99	89.147	ENSMICG00000007885	QARS	99	89.147	Microcebus_murinus
ENSODEG00000001143	-	99	88.889	ENSMOCG00000019363	Qars	99	88.889	Microtus_ochrogaster
ENSODEG00000001143	-	100	70.230	ENSMMOG00000020916	qars	99	67.571	Mola_mola
ENSODEG00000001143	-	99	79.636	ENSMODG00000013321	QARS	99	79.043	Monodelphis_domestica
ENSODEG00000001143	-	99	74.007	ENSMALG00000020739	qars	99	71.503	Monopterus_albus
ENSODEG00000001143	-	99	87.748	MGP_CAROLIEiJ_G0032693	Qars	99	87.748	Mus_caroli
ENSODEG00000001143	-	100	86.710	ENSMUSG00000032604	Qars	97	90.351	Mus_musculus
ENSODEG00000001143	-	99	88.226	MGP_PahariEiJ_G0015561	Qars	99	88.226	Mus_pahari
ENSODEG00000001143	-	100	86.839	MGP_SPRETEiJ_G0033838	Qars	100	86.839	Mus_spretus
ENSODEG00000001143	-	99	89.055	ENSMPUG00000014198	QARS	99	89.018	Mustela_putorius_furo
ENSODEG00000001143	-	99	88.557	ENSMLUG00000013976	QARS	99	88.114	Myotis_lucifugus
ENSODEG00000001143	-	99	88.372	ENSNGAG00000019897	Qars	99	88.133	Nannospalax_galili
ENSODEG00000001143	-	99	72.772	ENSNBRG00000018005	qars	99	71.189	Neolamprologus_brichardi
ENSODEG00000001143	-	83	87.342	ENSNLEG00000006772	-	98	87.342	Nomascus_leucogenys
ENSODEG00000001143	-	99	78.939	ENSMEUG00000006894	QARS	100	78.503	Notamacropus_eugenii
ENSODEG00000001143	-	66	87.313	ENSOPRG00000006256	-	100	87.313	Ochotona_princeps
ENSODEG00000001143	-	99	73.432	ENSONIG00000017262	qars	99	71.835	Oreochromis_niloticus
ENSODEG00000001143	-	99	79.801	ENSOANG00000014118	QARS	100	80.317	Ornithorhynchus_anatinus
ENSODEG00000001143	-	99	88.245	ENSOCUG00000005082	QARS	99	88.000	Oryctolagus_cuniculus
ENSODEG00000001143	-	99	73.013	ENSORLG00000010737	qars	99	70.855	Oryzias_latipes
ENSODEG00000001143	-	99	73.179	ENSORLG00020020742	qars	99	70.855	Oryzias_latipes_hni
ENSODEG00000001143	-	99	73.179	ENSORLG00015000737	qars	99	70.984	Oryzias_latipes_hsok
ENSODEG00000001143	-	99	73.675	ENSOMEG00000009629	qars	99	70.817	Oryzias_melastigma
ENSODEG00000001143	-	95	84.711	ENSOGAG00000003954	QARS	99	73.514	Otolemur_garnettii
ENSODEG00000001143	-	99	89.552	ENSOARG00000015195	QARS	99	88.760	Ovis_aries
ENSODEG00000001143	-	99	90.050	ENSPPRG00000005221	QARS	99	89.535	Panthera_pardus
ENSODEG00000001143	-	99	90.050	ENSPTIG00000017922	QARS	99	89.535	Panthera_tigris_altaica
ENSODEG00000001143	-	99	88.549	ENSPTRG00000014910	QARS	99	88.549	Pan_troglodytes
ENSODEG00000001143	-	99	88.282	ENSPANG00000016987	QARS	99	88.282	Papio_anubis
ENSODEG00000001143	-	58	52.381	ENSPKIG00000011455	-	65	52.381	Paramormyrops_kingsleyae
ENSODEG00000001143	-	99	68.442	ENSPMGG00000012803	qars	99	67.852	Periophthalmus_magnuspinnatus
ENSODEG00000001143	-	99	88.875	ENSPEMG00000017730	Qars	99	88.875	Peromyscus_maniculatus_bairdii
ENSODEG00000001143	-	98	78.788	ENSPCIG00000018726	QARS	97	78.788	Phascolarctos_cinereus
ENSODEG00000001143	-	99	72.951	ENSPFOG00000012143	qars	99	70.361	Poecilia_formosa
ENSODEG00000001143	-	99	73.311	ENSPLAG00000012885	qars	99	70.878	Poecilia_latipinna
ENSODEG00000001143	-	99	73.432	ENSPMEG00000009343	qars	99	71.067	Poecilia_mexicana
ENSODEG00000001143	-	99	69.486	ENSPREG00000016290	qars	99	68.182	Poecilia_reticulata
ENSODEG00000001143	-	99	88.630	ENSPPYG00000013882	QARS	98	88.630	Pongo_abelii
ENSODEG00000001143	-	63	89.062	ENSPCAG00000011911	-	61	89.062	Procavia_capensis
ENSODEG00000001143	-	99	88.630	ENSPCOG00000022610	QARS	99	88.630	Propithecus_coquereli
ENSODEG00000001143	-	99	88.391	ENSPVAG00000008720	QARS	99	86.563	Pteropus_vampyrus
ENSODEG00000001143	-	99	72.442	ENSPNYG00000005285	qars	99	70.672	Pundamilia_nyererei
ENSODEG00000001143	-	99	75.993	ENSPNAG00000029441	qars	99	73.446	Pygocentrus_nattereri
ENSODEG00000001143	-	99	89.221	ENSRNOG00000060912	Qars	99	89.018	Rattus_norvegicus
ENSODEG00000001143	-	99	88.501	ENSRNOG00000054139	LOC100911132	99	88.501	Rattus_norvegicus
ENSODEG00000001143	-	99	88.682	ENSRBIG00000030327	QARS	99	88.682	Rhinopithecus_bieti
ENSODEG00000001143	-	100	88.564	ENSRROG00000034983	QARS	100	88.564	Rhinopithecus_roxellana
ENSODEG00000001143	-	99	88.391	ENSSBOG00000025786	-	99	88.282	Saimiri_boliviensis_boliviensis
ENSODEG00000001143	-	99	64.842	ENSSBOG00000025151	-	100	69.915	Saimiri_boliviensis_boliviensis
ENSODEG00000001143	-	100	76.426	ENSSBOG00000020207	-	100	76.426	Saimiri_boliviensis_boliviensis
ENSODEG00000001143	-	99	81.157	ENSSHAG00000015068	QARS	100	80.081	Sarcophilus_harrisii
ENSODEG00000001143	-	99	73.798	ENSSFOG00015015812	qars	99	71.299	Scleropages_formosus
ENSODEG00000001143	-	99	72.112	ENSSMAG00000011758	qars	99	70.155	Scophthalmus_maximus
ENSODEG00000001143	-	99	73.102	ENSSDUG00000014004	qars	99	71.059	Seriola_dumerili
ENSODEG00000001143	-	99	73.134	ENSSLDG00000005475	qars	99	70.947	Seriola_lalandi_dorsalis
ENSODEG00000001143	-	84	83.953	ENSSARG00000000062	QARS	77	84.091	Sorex_araneus
ENSODEG00000001143	-	93	78.131	ENSSPUG00000010197	QARS	95	74.338	Sphenodon_punctatus
ENSODEG00000001143	-	99	74.215	ENSSPAG00000010803	qars	99	71.798	Stegastes_partitus
ENSODEG00000001143	-	99	88.723	ENSSSCG00000032031	QARS	99	88.501	Sus_scrofa
ENSODEG00000001143	-	99	78.073	ENSTGUG00000008887	QARS	99	76.796	Taeniopygia_guttata
ENSODEG00000001143	-	99	71.310	ENSTRUG00000021416	qars	99	70.039	Takifugu_rubripes
ENSODEG00000001143	-	99	62.748	ENSTNIG00000017913	qars	100	59.692	Tetraodon_nigroviridis
ENSODEG00000001143	-	89	85.606	ENSTBEG00000006109	QARS	89	85.606	Tupaia_belangeri
ENSODEG00000001143	-	99	88.723	ENSTTRG00000017352	QARS	99	88.114	Tursiops_truncatus
ENSODEG00000001143	-	98	88.699	ENSUAMG00000010069	QARS	92	88.699	Ursus_americanus
ENSODEG00000001143	-	99	85.806	ENSUMAG00000023208	QARS	99	85.806	Ursus_maritimus
ENSODEG00000001143	-	78	88.688	ENSVPAG00000009664	QARS	80	88.688	Vicugna_pacos
ENSODEG00000001143	-	99	86.563	ENSVVUG00000029158	QARS	99	86.563	Vulpes_vulpes
ENSODEG00000001143	-	99	74.793	ENSXETG00000009351	qars	99	73.575	Xenopus_tropicalis
ENSODEG00000001143	-	99	73.632	ENSXCOG00000005214	qars	99	71.543	Xiphophorus_couchianus
ENSODEG00000001143	-	99	73.927	ENSXMAG00000015931	qars	99	71.576	Xiphophorus_maculatus