EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000001157 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 7993 bases
Position: chrJH651803.1:517343-525335
Accession: 101569851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000001474	APOBEC_N	PF08210.11	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000001510	-	720	XM_012512907	ENSODEP00000001474	98 (aa)	-	-

Gene Model

Click here to download ENSODEG00000001157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001157's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001157	-	98	41.237	ENSACAG00000028578	-	53	41.237	Anolis_carolinensis
ENSODEG00000001157	-	100	64.286	ENSTSYG00000029141	APOBEC1	70	64.286	Carlito_syrichta
ENSODEG00000001157	-	99	47.959	ENSGAGG00000004947	-	63	47.959	Gopherus_agassizii
ENSODEG00000001157	-	100	68.367	ENSSTOG00000021971	APOBEC1	100	68.367	Ictidomys_tridecemlineatus
ENSODEG00000001157	-	99	62.887	ENSMOCG00000016170	-	86	62.887	Microtus_ochrogaster
ENSODEG00000001157	-	99	61.856	ENSMUSG00000040613	Apobec1	86	61.856	Mus_musculus
ENSODEG00000001157	-	99	59.794	MGP_PahariEiJ_G0022580	-	86	59.794	Mus_pahari
ENSODEG00000001157	-	99	61.856	MGP_SPRETEiJ_G0029857	Apobec1	86	61.856	Mus_spretus
ENSODEG00000001157	-	100	63.265	ENSOPRG00000009508	-	54	63.265	Ochotona_princeps
ENSODEG00000001157	-	100	67.347	ENSPCAG00000008733	APOBEC1	52	67.347	Procavia_capensis
ENSODEG00000001157	-	100	69.388	ENSSBOG00000030587	APOBEC1	55	69.388	Saimiri_boliviensis_boliviensis
ENSODEG00000001157	-	100	62.245	ENSSARG00000000032	-	57	62.245	Sorex_araneus
ENSODEG00000001157	-	100	63.265	ENSSARG00000011972	-	74	63.265	Sorex_araneus
ENSODEG00000001157	-	99	39.796	ENSTGUG00000013118	-	66	39.796	Taeniopygia_guttata
ENSODEG00000001157	-	100	66.327	ENSTTRG00000014015	APOBEC1	52	66.327	Tursiops_truncatus