EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001240 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cytoplasmic aconitate hydratase-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 2672 bases
Position: chrJH651772.1:843391-846062
Accession: 101580861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000001578	Aconitase	PF00330.20	2.2e-180	1	1
ENSODEP00000001578	Aconitase_C	PF00694.19	1.5e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000001616	-	2616	XM_012512692	ENSODEP00000001578	871 (aa)	XP_012368146	-

Gene Model

Click here to download ENSODEG00000001240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001240's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001240	-	100	92.688	ENSODEG00000015432	-	100	92.238
ENSODEG00000001240	-	99	62.595	ENSODEG00000015993	IREB2	92	61.654

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001240	-	100	91.901	ENSG00000122729	ACO1	100	91.901	Homo_sapiens
ENSODEG00000001240	-	100	78.853	ENSAPOG00000008670	aco1	99	78.853	Acanthochromis_polyacanthus
ENSODEG00000001240	-	100	90.674	ENSAMEG00000003746	ACO1	100	90.674	Ailuropoda_melanoleuca
ENSODEG00000001240	-	100	79.303	ENSACIG00000014377	aco1	99	79.303	Amphilophus_citrinellus
ENSODEG00000001240	-	100	79.303	ENSAOCG00000007699	aco1	99	79.303	Amphiprion_ocellaris
ENSODEG00000001240	-	100	79.415	ENSAPEG00000014370	aco1	99	79.415	Amphiprion_percula
ENSODEG00000001240	-	99	80.405	ENSATEG00000000560	aco1	99	80.405	Anabas_testudineus
ENSODEG00000001240	-	99	85.360	ENSAPLG00000015490	ACO1	99	85.360	Anas_platyrhynchos
ENSODEG00000001240	-	96	85.409	ENSACAG00000001541	ACO1	98	85.409	Anolis_carolinensis
ENSODEG00000001240	-	99	90.991	ENSANAG00000003359	ACO1	99	90.991	Aotus_nancymaae
ENSODEG00000001240	-	100	78.628	ENSACLG00000007755	aco1	99	78.853	Astatotilapia_calliptera
ENSODEG00000001240	-	99	80.180	ENSAMXG00000002499	aco1	99	80.180	Astyanax_mexicanus
ENSODEG00000001240	-	100	91.789	ENSBTAG00000000555	ACO1	100	91.789	Bos_taurus
ENSODEG00000001240	-	100	91.451	ENSCJAG00000007687	ACO1	100	91.451	Callithrix_jacchus
ENSODEG00000001240	-	100	91.011	ENSCAFG00000001786	ACO1	99	91.011	Canis_familiaris
ENSODEG00000001240	-	100	91.114	ENSCAFG00020014553	ACO1	100	91.114	Canis_lupus_dingo
ENSODEG00000001240	-	100	91.676	ENSCHIG00000007667	ACO1	100	91.676	Capra_hircus
ENSODEG00000001240	-	100	92.126	ENSTSYG00000004179	ACO1	99	92.126	Carlito_syrichta
ENSODEG00000001240	-	100	74.353	ENSCAPG00000007254	ACO1	100	74.241	Cavia_aperea
ENSODEG00000001240	-	100	92.688	ENSCPOG00000003768	ACO1	100	92.688	Cavia_porcellus
ENSODEG00000001240	-	100	91.226	ENSCCAG00000022465	ACO1	100	91.226	Cebus_capucinus
ENSODEG00000001240	-	100	91.339	ENSCATG00000045333	ACO1	100	91.339	Cercocebus_atys
ENSODEG00000001240	-	100	93.588	ENSCLAG00000002487	ACO1	100	93.588	Chinchilla_lanigera
ENSODEG00000001240	-	100	91.226	ENSCSAG00000009824	ACO1	99	91.226	Chlorocebus_sabaeus
ENSODEG00000001240	-	90	74.141	ENSCHOG00000008996	ACO1	90	74.024	Choloepus_hoffmanni
ENSODEG00000001240	-	99	85.698	ENSCPBG00000008077	ACO1	99	85.698	Chrysemys_picta_bellii
ENSODEG00000001240	-	100	91.114	ENSCANG00000014847	ACO1	100	91.114	Colobus_angolensis_palliatus
ENSODEG00000001240	-	100	91.901	ENSCGRG00001024337	Aco1	100	91.901	Cricetulus_griseus_chok1gshd
ENSODEG00000001240	-	100	90.776	ENSCGRG00000004877	-	100	90.776	Cricetulus_griseus_crigri
ENSODEG00000001240	-	99	76.967	ENSCSEG00000018262	aco1	99	76.967	Cynoglossus_semilaevis
ENSODEG00000001240	-	99	73.281	ENSCVAG00000020264	aco1	99	73.281	Cyprinodon_variegatus
ENSODEG00000001240	-	100	80.090	ENSDARG00000026376	aco1	99	80.090	Danio_rerio
ENSODEG00000001240	-	100	92.013	ENSDNOG00000003951	ACO1	100	92.013	Dasypus_novemcinctus
ENSODEG00000001240	-	100	90.889	ENSDORG00000014246	Aco1	100	90.889	Dipodomys_ordii
ENSODEG00000001240	-	86	68.783	ENSETEG00000012415	-	85	68.783	Echinops_telfairi
ENSODEG00000001240	-	99	55.992	ENSEBUG00000015441	aco1	97	55.992	Eptatretus_burgeri
ENSODEG00000001240	-	100	91.901	ENSEASG00005004602	ACO1	100	91.901	Equus_asinus_asinus
ENSODEG00000001240	-	100	91.789	ENSECAG00000014846	ACO1	100	91.789	Equus_caballus
ENSODEG00000001240	-	100	79.303	ENSEEUG00000015174	ACO1	100	79.303	Erinaceus_europaeus
ENSODEG00000001240	-	100	78.965	ENSELUG00000016812	aco1	97	78.965	Esox_lucius
ENSODEG00000001240	-	100	91.451	ENSFCAG00000001293	ACO1	100	91.451	Felis_catus
ENSODEG00000001240	-	99	85.135	ENSFALG00000001167	ACO1	99	85.135	Ficedula_albicollis
ENSODEG00000001240	-	100	93.251	ENSFDAG00000016058	ACO1	100	93.251	Fukomys_damarensis
ENSODEG00000001240	-	99	79.120	ENSFHEG00000005619	aco1	99	79.120	Fundulus_heteroclitus
ENSODEG00000001240	-	99	76.185	ENSGMOG00000005514	aco1	99	76.185	Gadus_morhua
ENSODEG00000001240	-	99	85.473	ENSGALG00000002162	ACO1	99	85.473	Gallus_gallus
ENSODEG00000001240	-	100	78.290	ENSGACG00000001637	aco1	99	78.290	Gasterosteus_aculeatus
ENSODEG00000001240	-	99	85.135	ENSGAGG00000023315	ACO1	99	85.135	Gopherus_agassizii
ENSODEG00000001240	-	100	91.676	ENSGGOG00000016306	ACO1	100	91.676	Gorilla_gorilla
ENSODEG00000001240	-	100	78.740	ENSHBUG00000008952	aco1	99	78.965	Haplochromis_burtoni
ENSODEG00000001240	-	100	93.926	ENSHGLG00000018922	Aco1	100	93.926	Heterocephalus_glaber_female
ENSODEG00000001240	-	100	93.926	ENSHGLG00100000149	Aco1	100	93.926	Heterocephalus_glaber_male
ENSODEG00000001240	-	99	76.437	ENSHCOG00000015881	aco1	99	76.437	Hippocampus_comes
ENSODEG00000001240	-	100	79.865	ENSIPUG00000020088	ACO1	99	79.865	Ictalurus_punctatus
ENSODEG00000001240	-	100	92.463	ENSSTOG00000006942	ACO1	99	92.463	Ictidomys_tridecemlineatus
ENSODEG00000001240	-	100	91.339	ENSJJAG00000013824	Aco1	100	91.339	Jaculus_jaculus
ENSODEG00000001240	-	99	78.716	ENSKMAG00000015759	aco1	99	78.716	Kryptolebias_marmoratus
ENSODEG00000001240	-	100	74.944	ENSLBEG00000013866	aco1	99	74.944	Labrus_bergylta
ENSODEG00000001240	-	75	70.772	ENSLACG00000000936	ACO1	99	70.448	Latimeria_chalumnae
ENSODEG00000001240	-	99	81.849	ENSLOCG00000011082	aco1	99	81.849	Lepisosteus_oculatus
ENSODEG00000001240	-	100	90.439	ENSLAFG00000013470	ACO1	100	90.439	Loxodonta_africana
ENSODEG00000001240	-	100	91.451	ENSMFAG00000001702	ACO1	100	91.451	Macaca_fascicularis
ENSODEG00000001240	-	100	91.564	ENSMMUG00000008196	ACO1	100	91.564	Macaca_mulatta
ENSODEG00000001240	-	100	91.339	ENSMNEG00000045040	ACO1	100	91.339	Macaca_nemestrina
ENSODEG00000001240	-	100	91.451	ENSMLEG00000005636	ACO1	100	91.451	Mandrillus_leucophaeus
ENSODEG00000001240	-	100	80.765	ENSMAMG00000002915	aco1	99	80.765	Mastacembelus_armatus
ENSODEG00000001240	-	99	75.252	ENSMZEG00005012733	aco1	99	75.140	Maylandia_zebra
ENSODEG00000001240	-	99	70.312	ENSMGAG00000008851	ACO1	99	70.312	Meleagris_gallopavo
ENSODEG00000001240	-	100	91.339	ENSMAUG00000021408	Aco1	100	91.339	Mesocricetus_auratus
ENSODEG00000001240	-	100	91.226	ENSMICG00000006540	ACO1	100	91.226	Microcebus_murinus
ENSODEG00000001240	-	100	91.789	ENSMOCG00000015393	Aco1	100	91.789	Microtus_ochrogaster
ENSODEG00000001240	-	100	78.065	ENSMMOG00000020282	aco1	99	78.065	Mola_mola
ENSODEG00000001240	-	100	87.402	ENSMODG00000004463	ACO1	100	87.402	Monodelphis_domestica
ENSODEG00000001240	-	100	79.640	ENSMALG00000019764	aco1	99	79.640	Monopterus_albus
ENSODEG00000001240	-	100	91.001	MGP_CAROLIEiJ_G0025892	Aco1	100	91.001	Mus_caroli
ENSODEG00000001240	-	100	90.664	ENSMUSG00000028405	Aco1	100	90.664	Mus_musculus
ENSODEG00000001240	-	100	91.001	MGP_PahariEiJ_G0024015	Aco1	100	91.001	Mus_pahari
ENSODEG00000001240	-	100	90.889	MGP_SPRETEiJ_G0026841	Aco1	100	90.889	Mus_spretus
ENSODEG00000001240	-	100	91.564	ENSMPUG00000004340	ACO1	100	91.564	Mustela_putorius_furo
ENSODEG00000001240	-	100	89.989	ENSMLUG00000003029	ACO1	100	89.989	Myotis_lucifugus
ENSODEG00000001240	-	100	92.351	ENSNGAG00000005703	Aco1	100	92.351	Nannospalax_galili
ENSODEG00000001240	-	100	61.461	ENSNBRG00000008973	aco1	99	61.461	Neolamprologus_brichardi
ENSODEG00000001240	-	100	91.451	ENSNLEG00000003409	ACO1	100	91.451	Nomascus_leucogenys
ENSODEG00000001240	-	89	79.727	ENSMEUG00000014756	ACO1	90	79.727	Notamacropus_eugenii
ENSODEG00000001240	-	100	88.526	ENSOPRG00000016791	ACO1	100	88.526	Ochotona_princeps
ENSODEG00000001240	-	100	78.740	ENSONIG00000019869	aco1	99	78.965	Oreochromis_niloticus
ENSODEG00000001240	-	81	88.382	ENSOANG00000012132	ACO1	100	88.382	Ornithorhynchus_anatinus
ENSODEG00000001240	-	100	89.989	ENSOCUG00000015960	ACO1	100	89.766	Oryctolagus_cuniculus
ENSODEG00000001240	-	99	79.392	ENSORLG00000020656	aco1	99	79.392	Oryzias_latipes
ENSODEG00000001240	-	99	79.167	ENSORLG00020010991	aco1	99	79.167	Oryzias_latipes_hni
ENSODEG00000001240	-	99	79.279	ENSORLG00015011785	aco1	99	79.279	Oryzias_latipes_hsok
ENSODEG00000001240	-	99	77.765	ENSOMEG00000000660	aco1	99	77.765	Oryzias_melastigma
ENSODEG00000001240	-	100	91.114	ENSOGAG00000010522	ACO1	100	91.114	Otolemur_garnettii
ENSODEG00000001240	-	100	91.676	ENSOARG00000014707	ACO1	98	91.676	Ovis_aries
ENSODEG00000001240	-	100	91.901	ENSPPAG00000033498	ACO1	100	91.901	Pan_paniscus
ENSODEG00000001240	-	100	91.339	ENSPPRG00000009875	ACO1	100	91.339	Panthera_pardus
ENSODEG00000001240	-	100	91.226	ENSPTIG00000016606	ACO1	98	91.226	Panthera_tigris_altaica
ENSODEG00000001240	-	100	91.901	ENSPTRG00000020843	ACO1	100	91.901	Pan_troglodytes
ENSODEG00000001240	-	100	91.451	ENSPANG00000025270	ACO1	100	91.451	Papio_anubis
ENSODEG00000001240	-	100	78.065	ENSPKIG00000023168	aco1	99	78.065	Paramormyrops_kingsleyae
ENSODEG00000001240	-	99	86.149	ENSPSIG00000008030	ACO1	99	86.149	Pelodiscus_sinensis
ENSODEG00000001240	-	99	79.481	ENSPMGG00000020708	aco1	99	79.481	Periophthalmus_magnuspinnatus
ENSODEG00000001240	-	100	91.789	ENSPEMG00000018464	Aco1	100	91.789	Peromyscus_maniculatus_bairdii
ENSODEG00000001240	-	100	87.627	ENSPCIG00000029321	ACO1	100	88.063	Phascolarctos_cinereus
ENSODEG00000001240	-	99	78.418	ENSPFOG00000013405	aco1	99	78.667	Poecilia_formosa
ENSODEG00000001240	-	90	79.323	ENSPLAG00000023422	aco1	97	79.323	Poecilia_latipinna
ENSODEG00000001240	-	90	79.250	ENSPMEG00000011800	aco1	98	79.250	Poecilia_mexicana
ENSODEG00000001240	-	99	78.467	ENSPREG00000021791	aco1	99	78.467	Poecilia_reticulata
ENSODEG00000001240	-	100	91.676	ENSPPYG00000019150	ACO1	95	91.676	Pongo_abelii
ENSODEG00000001240	-	78	89.726	ENSPCAG00000013222	ACO1	91	89.726	Procavia_capensis
ENSODEG00000001240	-	89	90.886	ENSPCOG00000021198	ACO1	100	90.886	Propithecus_coquereli
ENSODEG00000001240	-	96	85.748	ENSPVAG00000002372	ACO1	99	85.748	Pteropus_vampyrus
ENSODEG00000001240	-	100	78.740	ENSPNYG00000009425	aco1	99	78.965	Pundamilia_nyererei
ENSODEG00000001240	-	100	80.652	ENSPNAG00000017918	aco1	100	80.652	Pygocentrus_nattereri
ENSODEG00000001240	-	100	91.114	ENSRNOG00000005849	Aco1	100	91.114	Rattus_norvegicus
ENSODEG00000001240	-	100	91.114	ENSRBIG00000034592	ACO1	100	91.114	Rhinopithecus_bieti
ENSODEG00000001240	-	100	91.226	ENSRROG00000042672	ACO1	100	91.226	Rhinopithecus_roxellana
ENSODEG00000001240	-	100	91.451	ENSSBOG00000026008	ACO1	100	91.451	Saimiri_boliviensis_boliviensis
ENSODEG00000001240	-	100	87.753	ENSSHAG00000008924	ACO1	100	87.753	Sarcophilus_harrisii
ENSODEG00000001240	-	99	79.820	ENSSFOG00015018941	aco1	99	79.820	Scleropages_formosus
ENSODEG00000001240	-	75	80.149	ENSSMAG00000018908	aco1	80	80.030	Scophthalmus_maximus
ENSODEG00000001240	-	99	79.820	ENSSDUG00000002984	aco1	99	79.820	Seriola_dumerili
ENSODEG00000001240	-	99	80.158	ENSSLDG00000013952	aco1	99	80.158	Seriola_lalandi_dorsalis
ENSODEG00000001240	-	96	88.201	ENSSARG00000008437	ACO1	100	88.201	Sorex_araneus
ENSODEG00000001240	-	99	84.442	ENSSPUG00000002916	ACO1	99	84.442	Sphenodon_punctatus
ENSODEG00000001240	-	100	79.753	ENSSPAG00000019147	aco1	99	79.753	Stegastes_partitus
ENSODEG00000001240	-	100	91.901	ENSSSCG00000023807	ACO1	100	91.901	Sus_scrofa
ENSODEG00000001240	-	99	84.910	ENSTGUG00000001505	ACO1	99	84.910	Taeniopygia_guttata
ENSODEG00000001240	-	99	79.455	ENSTRUG00000006888	aco1	99	79.342	Takifugu_rubripes
ENSODEG00000001240	-	99	76.524	ENSTNIG00000005288	aco1	99	76.524	Tetraodon_nigroviridis
ENSODEG00000001240	-	100	87.964	ENSTBEG00000012369	ACO1	100	87.964	Tupaia_belangeri
ENSODEG00000001240	-	100	91.901	ENSTTRG00000016991	ACO1	99	91.901	Tursiops_truncatus
ENSODEG00000001240	-	100	91.114	ENSUAMG00000020699	ACO1	100	91.114	Ursus_americanus
ENSODEG00000001240	-	100	91.114	ENSUMAG00000005807	ACO1	100	91.114	Ursus_maritimus
ENSODEG00000001240	-	96	92.299	ENSVPAG00000009876	ACO1	99	92.299	Vicugna_pacos
ENSODEG00000001240	-	100	90.889	ENSVVUG00000021152	ACO1	91	90.889	Vulpes_vulpes
ENSODEG00000001240	-	99	82.022	ENSXETG00000009184	aco1	99	82.022	Xenopus_tropicalis
ENSODEG00000001240	-	51	79.365	ENSXCOG00000005638	aco1	96	79.365	Xiphophorus_couchianus
ENSODEG00000001240	-	99	78.579	ENSXMAG00000023603	aco1	99	78.579	Xiphophorus_maculatus