EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001327 (Gene tree)
Gene ID: 101562476
Gene Symbol: -
Alias: -
Full Name: HMG-box transcription factor 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 26786 bases
Position: chrJH651583.1:1424247-1451032
Accession: 101562476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000001680	AXH	PF08517.12	3.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000001720	-	2967	XM_004634986	ENSODEP00000001680	524 (aa)	XP_004635043	UPI0003340AD2

Gene Model

Click here to download ENSODEG00000001327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001327	-	98	70.370	ENSODEG00000010517	-	99	70.370
ENSODEG00000001327	-	95	73.843	ENSODEG00000000482	-	98	73.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001327	-	98	97.665	ENSG00000105856	HBP1	100	98.571	Homo_sapiens
ENSODEG00000001327	-	93	61.963	ENSAPOG00000015816	hbp1	99	62.372	Acanthochromis_polyacanthus
ENSODEG00000001327	-	99	96.146	ENSAMEG00000013492	HBP1	100	95.376	Ailuropoda_melanoleuca
ENSODEG00000001327	-	97	53.411	ENSACIG00000019093	-	96	53.606	Amphilophus_citrinellus
ENSODEG00000001327	-	94	60.200	ENSACIG00000018873	hbp1	94	60.600	Amphilophus_citrinellus
ENSODEG00000001327	-	93	61.350	ENSAOCG00000010889	hbp1	99	61.759	Amphiprion_ocellaris
ENSODEG00000001327	-	98	52.710	ENSAOCG00000001429	-	99	53.788	Amphiprion_ocellaris
ENSODEG00000001327	-	93	61.350	ENSAPEG00000002330	hbp1	99	61.759	Amphiprion_percula
ENSODEG00000001327	-	98	51.589	ENSAPEG00000022589	-	99	53.030	Amphiprion_percula
ENSODEG00000001327	-	93	61.963	ENSATEG00000016411	hbp1	99	62.525	Anabas_testudineus
ENSODEG00000001327	-	97	54.633	ENSATEG00000003902	-	97	57.377	Anabas_testudineus
ENSODEG00000001327	-	98	83.846	ENSAPLG00000007110	HBP1	100	83.846	Anas_platyrhynchos
ENSODEG00000001327	-	98	80.502	ENSACAG00000015023	HBP1	99	81.081	Anolis_carolinensis
ENSODEG00000001327	-	99	97.495	ENSANAG00000022302	HBP1	100	97.471	Aotus_nancymaae
ENSODEG00000001327	-	95	60.359	ENSACLG00000004758	hbp1	98	60.757	Astatotilapia_calliptera
ENSODEG00000001327	-	98	52.741	ENSACLG00000003606	HBP1	99	53.107	Astatotilapia_calliptera
ENSODEG00000001327	-	100	63.636	ENSAMXG00000017678	hbp1	100	65.909	Astyanax_mexicanus
ENSODEG00000001327	-	100	94.275	ENSBTAG00000005524	HBP1	100	93.702	Bos_taurus
ENSODEG00000001327	-	99	97.500	ENSCJAG00000016260	HBP1	100	97.500	Callithrix_jacchus
ENSODEG00000001327	-	100	96.183	ENSCAFG00000003939	HBP1	100	95.420	Canis_familiaris
ENSODEG00000001327	-	100	96.183	ENSCAFG00020023119	HBP1	100	95.420	Canis_lupus_dingo
ENSODEG00000001327	-	98	94.553	ENSCHIG00000024405	HBP1	100	93.969	Capra_hircus
ENSODEG00000001327	-	100	96.780	ENSTSYG00000010057	HBP1	100	97.670	Carlito_syrichta
ENSODEG00000001327	-	99	94.990	ENSCAPG00000017460	HBP1	100	94.220	Cavia_aperea
ENSODEG00000001327	-	100	95.611	ENSCPOG00000002375	HBP1	100	94.847	Cavia_porcellus
ENSODEG00000001327	-	99	97.881	ENSCCAG00000026359	HBP1	100	97.860	Cebus_capucinus
ENSODEG00000001327	-	99	97.495	ENSCATG00000021910	HBP1	100	97.471	Cercocebus_atys
ENSODEG00000001327	-	100	98.092	ENSCLAG00000005170	HBP1	100	98.092	Chinchilla_lanigera
ENSODEG00000001327	-	100	97.328	ENSCSAG00000011395	HBP1	100	97.328	Chlorocebus_sabaeus
ENSODEG00000001327	-	69	100.000	ENSCHOG00000006820	HBP1	70	100.000	Choloepus_hoffmanni
ENSODEG00000001327	-	100	85.338	ENSCPBG00000000954	HBP1	100	84.962	Chrysemys_picta_bellii
ENSODEG00000001327	-	99	97.495	ENSCANG00000022804	HBP1	100	97.471	Colobus_angolensis_palliatus
ENSODEG00000001327	-	100	93.333	ENSCGRG00001014437	Hbp1	100	93.333	Cricetulus_griseus_chok1gshd
ENSODEG00000001327	-	100	93.333	ENSCGRG00000013859	Hbp1	100	93.333	Cricetulus_griseus_crigri
ENSODEG00000001327	-	93	61.554	ENSCSEG00000003373	hbp1	99	61.963	Cynoglossus_semilaevis
ENSODEG00000001327	-	98	53.065	ENSCVAG00000008501	-	99	53.155	Cyprinodon_variegatus
ENSODEG00000001327	-	93	61.554	ENSCVAG00000008930	hbp1	99	61.759	Cyprinodon_variegatus
ENSODEG00000001327	-	100	62.879	ENSDARG00000028517	hbp1	100	63.495	Danio_rerio
ENSODEG00000001327	-	100	96.947	ENSDNOG00000004405	HBP1	96	96.917	Dasypus_novemcinctus
ENSODEG00000001327	-	69	95.856	ENSDORG00000010576	Hbp1	99	95.856	Dipodomys_ordii
ENSODEG00000001327	-	98	86.381	ENSETEG00000018542	HBP1	100	86.381	Echinops_telfairi
ENSODEG00000001327	-	91	45.309	ENSEBUG00000016475	hbp1	83	45.491	Eptatretus_burgeri
ENSODEG00000001327	-	100	97.137	ENSEASG00005017469	HBP1	93	97.137	Equus_asinus_asinus
ENSODEG00000001327	-	100	97.328	ENSECAG00000020969	HBP1	100	97.115	Equus_caballus
ENSODEG00000001327	-	93	61.711	ENSELUG00000006967	hbp1	99	61.507	Esox_lucius
ENSODEG00000001327	-	97	56.564	ENSELUG00000017031	-	92	56.505	Esox_lucius
ENSODEG00000001327	-	99	95.385	ENSFCAG00000005858	HBP1	92	94.615	Felis_catus
ENSODEG00000001327	-	100	82.364	ENSFALG00000010259	HBP1	100	81.989	Ficedula_albicollis
ENSODEG00000001327	-	100	97.328	ENSFDAG00000007897	HBP1	100	97.328	Fukomys_damarensis
ENSODEG00000001327	-	93	61.350	ENSFHEG00000008222	hbp1	99	61.759	Fundulus_heteroclitus
ENSODEG00000001327	-	98	52.952	ENSFHEG00000014389	-	99	52.952	Fundulus_heteroclitus
ENSODEG00000001327	-	93	60.656	ENSGMOG00000013782	hbp1	99	60.861	Gadus_morhua
ENSODEG00000001327	-	100	82.552	ENSGALG00000008050	HBP1	100	81.989	Gallus_gallus
ENSODEG00000001327	-	93	61.963	ENSGAFG00000021976	hbp1	99	62.372	Gambusia_affinis
ENSODEG00000001327	-	98	53.640	ENSGAFG00000004651	-	99	53.920	Gambusia_affinis
ENSODEG00000001327	-	92	54.361	ENSGACG00000019192	-	95	53.955	Gasterosteus_aculeatus
ENSODEG00000001327	-	93	59.635	ENSGACG00000010054	hbp1	99	59.838	Gasterosteus_aculeatus
ENSODEG00000001327	-	100	85.150	ENSGAGG00000023042	HBP1	100	84.774	Gopherus_agassizii
ENSODEG00000001327	-	99	97.137	ENSGGOG00000007788	HBP1	100	97.471	Gorilla_gorilla
ENSODEG00000001327	-	98	53.119	ENSHBUG00000016198	-	99	53.484	Haplochromis_burtoni
ENSODEG00000001327	-	95	60.757	ENSHBUG00000004967	hbp1	98	61.155	Haplochromis_burtoni
ENSODEG00000001327	-	100	96.756	ENSHGLG00000019188	HBP1	100	96.756	Heterocephalus_glaber_female
ENSODEG00000001327	-	100	96.756	ENSHGLG00100001912	HBP1	100	96.756	Heterocephalus_glaber_male
ENSODEG00000001327	-	98	74.708	ENSHGLG00100014672	-	100	74.125	Heterocephalus_glaber_male
ENSODEG00000001327	-	93	59.100	ENSHCOG00000011877	hbp1	99	59.509	Hippocampus_comes
ENSODEG00000001327	-	90	52.442	ENSHCOG00000010740	-	87	52.866	Hippocampus_comes
ENSODEG00000001327	-	100	65.530	ENSIPUG00000023044	hbp1	100	65.341	Ictalurus_punctatus
ENSODEG00000001327	-	100	97.519	ENSSTOG00000013846	HBP1	100	97.519	Ictidomys_tridecemlineatus
ENSODEG00000001327	-	100	97.137	ENSJJAG00000015341	Hbp1	100	97.137	Jaculus_jaculus
ENSODEG00000001327	-	93	52.749	ENSKMAG00000000266	-	96	53.455	Kryptolebias_marmoratus
ENSODEG00000001327	-	93	61.818	ENSKMAG00000003132	hbp1	99	62.020	Kryptolebias_marmoratus
ENSODEG00000001327	-	96	58.733	ENSLBEG00000012078	hbp1	99	61.663	Labrus_bergylta
ENSODEG00000001327	-	98	53.359	ENSLBEG00000023959	-	99	53.743	Labrus_bergylta
ENSODEG00000001327	-	99	73.635	ENSLACG00000009119	HBP1	98	73.823	Latimeria_chalumnae
ENSODEG00000001327	-	100	70.132	ENSLOCG00000015822	hbp1	100	70.321	Lepisosteus_oculatus
ENSODEG00000001327	-	98	94.369	ENSLAFG00000005317	HBP1	100	94.369	Loxodonta_africana
ENSODEG00000001327	-	99	97.495	ENSMFAG00000030375	HBP1	100	97.471	Macaca_fascicularis
ENSODEG00000001327	-	98	97.471	ENSMMUG00000015409	HBP1	98	97.471	Macaca_mulatta
ENSODEG00000001327	-	98	91.634	ENSMNEG00000037516	HBP1	100	91.634	Macaca_nemestrina
ENSODEG00000001327	-	99	97.688	ENSMLEG00000031993	HBP1	100	97.665	Mandrillus_leucophaeus
ENSODEG00000001327	-	92	57.407	ENSMAMG00000023588	-	91	57.407	Mastacembelus_armatus
ENSODEG00000001327	-	93	63.115	ENSMAMG00000023227	hbp1	99	63.320	Mastacembelus_armatus
ENSODEG00000001327	-	94	59.839	ENSMZEG00005005999	hbp1	81	60.241	Maylandia_zebra
ENSODEG00000001327	-	98	52.741	ENSMZEG00005015065	HBP1	99	53.107	Maylandia_zebra
ENSODEG00000001327	-	99	82.634	ENSMGAG00000006880	HBP1	99	82.061	Meleagris_gallopavo
ENSODEG00000001327	-	100	92.952	ENSMAUG00000011449	Hbp1	100	92.952	Mesocricetus_auratus
ENSODEG00000001327	-	100	97.328	ENSMICG00000012858	HBP1	100	97.276	Microcebus_murinus
ENSODEG00000001327	-	100	94.286	ENSMOCG00000019227	Hbp1	100	94.286	Microtus_ochrogaster
ENSODEG00000001327	-	99	58.462	ENSMMOG00000012207	hbp1	100	59.038	Mola_mola
ENSODEG00000001327	-	92	54.959	ENSMMOG00000010239	-	98	54.209	Mola_mola
ENSODEG00000001327	-	100	91.271	ENSMODG00000016376	HBP1	91	90.892	Monodelphis_domestica
ENSODEG00000001327	-	93	61.963	ENSMALG00000009884	hbp1	99	62.322	Monopterus_albus
ENSODEG00000001327	-	93	52.352	ENSMALG00000010834	-	95	52.352	Monopterus_albus
ENSODEG00000001327	-	100	94.867	MGP_CAROLIEiJ_G0017683	Hbp1	100	94.867	Mus_caroli
ENSODEG00000001327	-	100	94.867	ENSMUSG00000002996	Hbp1	100	94.867	Mus_musculus
ENSODEG00000001327	-	100	94.857	MGP_PahariEiJ_G0029441	Hbp1	100	94.857	Mus_pahari
ENSODEG00000001327	-	100	94.867	MGP_SPRETEiJ_G0018525	Hbp1	100	94.867	Mus_spretus
ENSODEG00000001327	-	100	97.137	ENSMPUG00000018249	HBP1	100	97.137	Mustela_putorius_furo
ENSODEG00000001327	-	99	97.303	ENSMLUG00000012425	HBP1	99	97.303	Myotis_lucifugus
ENSODEG00000001327	-	100	96.756	ENSNGAG00000023485	Hbp1	100	96.756	Nannospalax_galili
ENSODEG00000001327	-	98	53.497	ENSNBRG00000017820	-	99	53.861	Neolamprologus_brichardi
ENSODEG00000001327	-	95	60.757	ENSNBRG00000001405	hbp1	98	61.155	Neolamprologus_brichardi
ENSODEG00000001327	-	99	97.132	ENSNLEG00000008761	HBP1	100	97.665	Nomascus_leucogenys
ENSODEG00000001327	-	88	88.147	ENSMEUG00000011116	HBP1	90	87.716	Notamacropus_eugenii
ENSODEG00000001327	-	69	100.000	ENSOPRG00000005315	HBP1	70	100.000	Ochotona_princeps
ENSODEG00000001327	-	98	60.155	ENSONIG00000008523	hbp1	99	61.963	Oreochromis_niloticus
ENSODEG00000001327	-	98	54.054	ENSONIG00000011868	-	99	54.633	Oreochromis_niloticus
ENSODEG00000001327	-	98	84.749	ENSOANG00000003174	HBP1	100	84.170	Ornithorhynchus_anatinus
ENSODEG00000001327	-	98	95.331	ENSOCUG00000012758	HBP1	100	95.331	Oryctolagus_cuniculus
ENSODEG00000001327	-	98	54.023	ENSORLG00000009474	-	99	54.215	Oryzias_latipes
ENSODEG00000001327	-	93	60.736	ENSORLG00000004396	hbp1	99	61.350	Oryzias_latipes
ENSODEG00000001327	-	93	59.426	ENSORLG00020000370	hbp1	99	61.145	Oryzias_latipes_hni
ENSODEG00000001327	-	98	54.038	ENSORLG00020004269	-	99	54.231	Oryzias_latipes_hni
ENSODEG00000001327	-	93	59.305	ENSORLG00015006557	hbp1	99	61.224	Oryzias_latipes_hsok
ENSODEG00000001327	-	99	53.371	ENSOMEG00000013045	-	99	53.073	Oryzias_melastigma
ENSODEG00000001327	-	93	61.145	ENSOMEG00000012837	hbp1	99	61.759	Oryzias_melastigma
ENSODEG00000001327	-	98	96.887	ENSOGAG00000013102	HBP1	100	96.887	Otolemur_garnettii
ENSODEG00000001327	-	100	94.275	ENSOARG00000005055	HBP1	100	93.702	Ovis_aries
ENSODEG00000001327	-	99	97.328	ENSPPAG00000042116	HBP1	100	97.665	Pan_paniscus
ENSODEG00000001327	-	98	95.331	ENSPPRG00000007240	HBP1	100	94.553	Panthera_pardus
ENSODEG00000001327	-	98	92.996	ENSPTIG00000002734	HBP1	100	92.218	Panthera_tigris_altaica
ENSODEG00000001327	-	99	97.328	ENSPTRG00000019575	HBP1	100	97.665	Pan_troglodytes
ENSODEG00000001327	-	99	97.495	ENSPANG00000024385	HBP1	100	97.471	Papio_anubis
ENSODEG00000001327	-	100	53.875	ENSPKIG00000016269	HBP1	99	54.685	Paramormyrops_kingsleyae
ENSODEG00000001327	-	98	63.743	ENSPKIG00000016967	hbp1	98	63.548	Paramormyrops_kingsleyae
ENSODEG00000001327	-	100	84.774	ENSPSIG00000012478	HBP1	94	84.398	Pelodiscus_sinensis
ENSODEG00000001327	-	92	51.446	ENSPMGG00000008031	-	93	51.660	Periophthalmus_magnuspinnatus
ENSODEG00000001327	-	93	61.055	ENSPMGG00000005789	hbp1	95	61.258	Periophthalmus_magnuspinnatus
ENSODEG00000001327	-	100	94.476	ENSPEMG00000014801	Hbp1	100	94.476	Peromyscus_maniculatus_bairdii
ENSODEG00000001327	-	96	48.846	ENSPMAG00000002631	hbp1	99	49.423	Petromyzon_marinus
ENSODEG00000001327	-	100	91.651	ENSPCIG00000004275	HBP1	91	91.082	Phascolarctos_cinereus
ENSODEG00000001327	-	98	53.155	ENSPFOG00000012271	-	96	53.435	Poecilia_formosa
ENSODEG00000001327	-	93	62.168	ENSPFOG00000003951	hbp1	99	62.577	Poecilia_formosa
ENSODEG00000001327	-	93	62.168	ENSPLAG00000003142	hbp1	99	62.577	Poecilia_latipinna
ENSODEG00000001327	-	92	55.694	ENSPLAG00000012669	-	98	55.992	Poecilia_latipinna
ENSODEG00000001327	-	98	52.964	ENSPMEG00000015095	-	99	53.244	Poecilia_mexicana
ENSODEG00000001327	-	93	62.168	ENSPMEG00000003800	hbp1	99	62.577	Poecilia_mexicana
ENSODEG00000001327	-	57	62.626	ENSPREG00000015242	-	84	62.626	Poecilia_reticulata
ENSODEG00000001327	-	93	61.963	ENSPREG00000004000	hbp1	99	62.372	Poecilia_reticulata
ENSODEG00000001327	-	100	97.519	ENSPPYG00000017898	HBP1	99	97.519	Pongo_abelii
ENSODEG00000001327	-	97	93.517	ENSPCAG00000014060	HBP1	100	92.927	Procavia_capensis
ENSODEG00000001327	-	83	98.163	ENSPCOG00000015370	HBP1	100	98.163	Propithecus_coquereli
ENSODEG00000001327	-	98	96.887	ENSPVAG00000014543	HBP1	100	96.887	Pteropus_vampyrus
ENSODEG00000001327	-	95	60.359	ENSPNYG00000001079	hbp1	98	60.757	Pundamilia_nyererei
ENSODEG00000001327	-	98	54.049	ENSPNYG00000015063	HBP1	99	54.049	Pundamilia_nyererei
ENSODEG00000001327	-	100	66.288	ENSPNAG00000029977	hbp1	100	66.856	Pygocentrus_nattereri
ENSODEG00000001327	-	100	92.952	ENSRNOG00000008927	Hbp1	100	92.571	Rattus_norvegicus
ENSODEG00000001327	-	98	79.183	ENSRBIG00000042410	HBP1	100	79.183	Rhinopithecus_bieti
ENSODEG00000001327	-	99	97.110	ENSRROG00000036622	HBP1	100	97.082	Rhinopithecus_roxellana
ENSODEG00000001327	-	99	96.750	ENSSBOG00000023603	HBP1	100	97.276	Saimiri_boliviensis_boliviensis
ENSODEG00000001327	-	100	91.271	ENSSHAG00000010948	HBP1	100	90.133	Sarcophilus_harrisii
ENSODEG00000001327	-	98	68.350	ENSSFOG00015011155	hbp1	100	68.350	Scleropages_formosus
ENSODEG00000001327	-	93	61.350	ENSSMAG00000009892	hbp1	99	61.759	Scophthalmus_maximus
ENSODEG00000001327	-	98	52.919	ENSSMAG00000012631	-	94	53.107	Scophthalmus_maximus
ENSODEG00000001327	-	98	53.119	ENSSDUG00000015387	-	96	53.686	Seriola_dumerili
ENSODEG00000001327	-	97	60.547	ENSSDUG00000022273	hbp1	99	62.168	Seriola_dumerili
ENSODEG00000001327	-	93	55.624	ENSSLDG00000017324	-	99	56.327	Seriola_lalandi_dorsalis
ENSODEG00000001327	-	93	61.759	ENSSLDG00000009669	hbp1	99	62.168	Seriola_lalandi_dorsalis
ENSODEG00000001327	-	88	96.529	ENSSARG00000007731	HBP1	100	96.529	Sorex_araneus
ENSODEG00000001327	-	99	85.660	ENSSPUG00000019157	HBP1	95	85.277	Sphenodon_punctatus
ENSODEG00000001327	-	93	61.554	ENSSPAG00000004739	hbp1	99	61.759	Stegastes_partitus
ENSODEG00000001327	-	98	51.705	ENSSPAG00000009193	-	99	53.612	Stegastes_partitus
ENSODEG00000001327	-	100	96.947	ENSSSCG00000035673	HBP1	100	96.947	Sus_scrofa
ENSODEG00000001327	-	98	82.692	ENSTGUG00000003100	HBP1	100	82.308	Taeniopygia_guttata
ENSODEG00000001327	-	93	51.717	ENSTRUG00000011881	-	79	51.429	Takifugu_rubripes
ENSODEG00000001327	-	93	60.986	ENSTRUG00000016990	hbp1	99	61.396	Takifugu_rubripes
ENSODEG00000001327	-	98	47.601	ENSTNIG00000002023	-	100	47.786	Tetraodon_nigroviridis
ENSODEG00000001327	-	93	61.270	ENSTNIG00000016027	hbp1	99	61.837	Tetraodon_nigroviridis
ENSODEG00000001327	-	98	84.436	ENSTBEG00000007793	HBP1	100	84.436	Tupaia_belangeri
ENSODEG00000001327	-	98	95.914	ENSTTRG00000006826	HBP1	100	95.525	Tursiops_truncatus
ENSODEG00000001327	-	100	96.565	ENSUAMG00000005951	HBP1	100	96.565	Ursus_americanus
ENSODEG00000001327	-	100	96.374	ENSUMAG00000018257	HBP1	100	96.374	Ursus_maritimus
ENSODEG00000001327	-	88	86.877	ENSVPAG00000008629	HBP1	100	86.877	Vicugna_pacos
ENSODEG00000001327	-	100	96.183	ENSVVUG00000022009	HBP1	100	95.420	Vulpes_vulpes
ENSODEG00000001327	-	98	76.538	ENSXETG00000005922	hbp1	98	76.538	Xenopus_tropicalis
ENSODEG00000001327	-	92	61.443	ENSXCOG00000020795	hbp1	91	61.856	Xiphophorus_couchianus
ENSODEG00000001327	-	98	53.053	ENSXMAG00000007586	-	99	53.524	Xiphophorus_maculatus
ENSODEG00000001327	-	97	59.690	ENSXMAG00000016455	hbp1	99	62.168	Xiphophorus_maculatus