EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001453 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 643 bases
Position: chrJH651764.1:1011885-1012527
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000001855	ResIII	PF04851.15	6.7e-06	1	1
ENSODEP00000001855	DEAD	PF00270.29	5.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000001897	-	618	-	ENSODEP00000001855	205 (aa)	-	-

Gene Model

Click here to download ENSODEG00000001453's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001453's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001453	-	67	31.387	ENSODEG00000005642	-	65	31.387
ENSODEG00000001453	-	94	80.882	ENSODEG00000019523	-	51	81.944
ENSODEG00000001453	-	94	77.941	ENSODEG00000009068	-	50	79.167
ENSODEG00000001453	-	94	80.928	ENSODEG00000017817	-	51	82.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001453	-	100	77.315	ENSG00000123136	DDX39A	96	82.609	Homo_sapiens
ENSODEG00000001453	-	94	78.922	ENSAMEG00000013379	DDX39A	50	80.093	Ailuropoda_melanoleuca
ENSODEG00000001453	-	100	74.074	ENSACIG00000007948	-	51	74.074	Amphilophus_citrinellus
ENSODEG00000001453	-	94	75.490	ENSACAG00000010756	DDX39A	51	76.852	Anolis_carolinensis
ENSODEG00000001453	-	91	76.263	ENSANAG00000036829	-	81	76.852	Aotus_nancymaae
ENSODEG00000001453	-	100	63.889	ENSANAG00000025403	-	89	61.084	Aotus_nancymaae
ENSODEG00000001453	-	88	78.646	ENSBTAG00000021820	DDX39A	51	79.167	Bos_taurus
ENSODEG00000001453	-	91	76.768	ENSCJAG00000004760	DDX39A	81	77.315	Callithrix_jacchus
ENSODEG00000001453	-	94	78.922	ENSCAFG00000016355	DDX39A	51	80.093	Canis_familiaris
ENSODEG00000001453	-	94	78.922	ENSCAFG00020007399	DDX39A	51	80.093	Canis_lupus_dingo
ENSODEG00000001453	-	88	79.167	ENSCHIG00000019059	DDX39A	51	79.630	Capra_hircus
ENSODEG00000001453	-	100	79.630	ENSTSYG00000030248	DDX39A	81	79.630	Carlito_syrichta
ENSODEG00000001453	-	100	81.481	ENSCAPG00000010901	DDX39A	51	81.481	Cavia_aperea
ENSODEG00000001453	-	94	80.882	ENSCPOG00000008615	DDX39A	51	81.944	Cavia_porcellus
ENSODEG00000001453	-	91	77.778	ENSCCAG00000034932	DDX39A	81	78.241	Cebus_capucinus
ENSODEG00000001453	-	100	77.315	ENSCATG00000044440	DDX39A	81	77.315	Cercocebus_atys
ENSODEG00000001453	-	94	79.412	ENSCLAG00000015069	DDX39A	51	80.556	Chinchilla_lanigera
ENSODEG00000001453	-	100	77.315	ENSCSAG00000006342	DDX39A	51	77.315	Chlorocebus_sabaeus
ENSODEG00000001453	-	100	75.926	ENSCPBG00000011879	DDX39A	51	75.926	Chrysemys_picta_bellii
ENSODEG00000001453	-	100	76.389	ENSCANG00000034172	-	51	76.389	Colobus_angolensis_palliatus
ENSODEG00000001453	-	100	77.315	ENSCANG00000037031	-	81	77.315	Colobus_angolensis_palliatus
ENSODEG00000001453	-	100	79.167	ENSCGRG00001001611	Ddx39	51	79.167	Cricetulus_griseus_chok1gshd
ENSODEG00000001453	-	100	79.167	ENSCGRG00000014915	Ddx39	51	79.167	Cricetulus_griseus_crigri
ENSODEG00000001453	-	94	69.608	ENSCVAG00000007477	DDX39A	51	71.296	Cyprinodon_variegatus
ENSODEG00000001453	-	94	72.549	ENSDARG00000015111	ddx39ab	51	74.074	Danio_rerio
ENSODEG00000001453	-	100	73.148	ENSDARG00000006225	ddx39aa	89	73.148	Danio_rerio
ENSODEG00000001453	-	94	77.941	ENSDORG00000013041	Ddx39	51	79.167	Dipodomys_ordii
ENSODEG00000001453	-	99	66.204	FBgn0014189	Hel25E	64	70.103	Drosophila_melanogaster
ENSODEG00000001453	-	100	55.046	ENSETEG00000016559	DDX39A	52	55.046	Echinops_telfairi
ENSODEG00000001453	-	94	71.078	ENSEBUG00000010042	ddx39aa	56	71.078	Eptatretus_burgeri
ENSODEG00000001453	-	94	77.451	ENSEASG00005015272	DDX39A	95	78.283	Equus_asinus_asinus
ENSODEG00000001453	-	94	77.451	ENSECAG00000040285	DDX39A	56	76.882	Equus_caballus
ENSODEG00000001453	-	100	80.093	ENSFCAG00000013488	DDX39A	81	80.093	Felis_catus
ENSODEG00000001453	-	94	79.902	ENSFDAG00000014649	DDX39A	51	81.019	Fukomys_damarensis
ENSODEG00000001453	-	94	74.020	ENSGAGG00000007527	DDX39A	51	75.463	Gopherus_agassizii
ENSODEG00000001453	-	100	77.315	ENSGGOG00000005414	DDX39A	81	77.315	Gorilla_gorilla
ENSODEG00000001453	-	94	78.922	ENSHGLG00000018263	DDX39A	51	80.093	Heterocephalus_glaber_female
ENSODEG00000001453	-	94	78.922	ENSSTOG00000013762	DDX39A	51	80.093	Ictidomys_tridecemlineatus
ENSODEG00000001453	-	100	77.315	ENSJJAG00000004337	-	51	77.315	Jaculus_jaculus
ENSODEG00000001453	-	100	74.074	ENSLACG00000015063	DDX39A	50	74.074	Latimeria_chalumnae
ENSODEG00000001453	-	94	73.529	ENSLOCG00000006534	DDX39A	51	75.000	Lepisosteus_oculatus
ENSODEG00000001453	-	94	77.451	ENSLAFG00000022777	DDX39A	51	78.704	Loxodonta_africana
ENSODEG00000001453	-	100	77.315	ENSMFAG00000044174	DDX39A	81	77.315	Macaca_fascicularis
ENSODEG00000001453	-	100	77.315	ENSMMUG00000005723	DDX39A	81	77.315	Macaca_mulatta
ENSODEG00000001453	-	100	77.315	ENSMNEG00000044292	DDX39A	81	77.315	Macaca_nemestrina
ENSODEG00000001453	-	100	77.315	ENSMLEG00000007602	DDX39A	81	77.315	Mandrillus_leucophaeus
ENSODEG00000001453	-	100	79.167	ENSMAUG00000008459	Ddx39	51	79.167	Mesocricetus_auratus
ENSODEG00000001453	-	100	80.093	ENSMICG00000015325	DDX39A	90	78.788	Microcebus_murinus
ENSODEG00000001453	-	100	79.167	MGP_CAROLIEiJ_G0031277	Ddx39	95	78.788	Mus_caroli
ENSODEG00000001453	-	100	79.167	ENSMUSG00000005481	Ddx39	95	78.788	Mus_musculus
ENSODEG00000001453	-	100	79.167	MGP_PahariEiJ_G0022883	Ddx39	95	78.788	Mus_pahari
ENSODEG00000001453	-	100	79.167	MGP_SPRETEiJ_G0032396	Ddx39	95	78.788	Mus_spretus
ENSODEG00000001453	-	94	77.941	ENSMPUG00000003051	DDX39A	51	79.167	Mustela_putorius_furo
ENSODEG00000001453	-	94	78.922	ENSMLUG00000028448	-	51	80.093	Myotis_lucifugus
ENSODEG00000001453	-	100	77.778	ENSMLUG00000000939	-	51	77.778	Myotis_lucifugus
ENSODEG00000001453	-	94	78.922	ENSMLUG00000009280	-	50	80.093	Myotis_lucifugus
ENSODEG00000001453	-	100	79.167	ENSMLUG00000026217	-	51	79.167	Myotis_lucifugus
ENSODEG00000001453	-	100	77.315	ENSMLUG00000029622	-	50	77.315	Myotis_lucifugus
ENSODEG00000001453	-	100	78.241	ENSNGAG00000010734	Ddx39	51	78.241	Nannospalax_galili
ENSODEG00000001453	-	100	65.278	ENSNLEG00000013515	DDX39A	81	65.278	Nomascus_leucogenys
ENSODEG00000001453	-	94	63.725	ENSMEUG00000005450	DDX39A	51	65.741	Notamacropus_eugenii
ENSODEG00000001453	-	77	63.690	ENSOCUG00000002496	DDX39A	50	63.690	Oryctolagus_cuniculus
ENSODEG00000001453	-	100	73.148	ENSOGAG00000025638	-	50	74.074	Otolemur_garnettii
ENSODEG00000001453	-	94	78.922	ENSOGAG00000010280	-	51	80.093	Otolemur_garnettii
ENSODEG00000001453	-	100	77.315	ENSPPAG00000040065	DDX39A	81	77.315	Pan_paniscus
ENSODEG00000001453	-	100	80.093	ENSPPRG00000003506	DDX39A	81	80.093	Panthera_pardus
ENSODEG00000001453	-	100	80.093	ENSPTIG00000017287	DDX39A	81	80.093	Panthera_tigris_altaica
ENSODEG00000001453	-	100	77.315	ENSPTRG00000042673	-	51	77.315	Pan_troglodytes
ENSODEG00000001453	-	100	77.315	ENSPTRG00000010590	DDX39A	81	77.315	Pan_troglodytes
ENSODEG00000001453	-	100	77.315	ENSPANG00000015036	DDX39A	81	77.315	Papio_anubis
ENSODEG00000001453	-	100	78.704	ENSPEMG00000017767	-	51	78.704	Peromyscus_maniculatus_bairdii
ENSODEG00000001453	-	94	75.490	ENSPCIG00000029788	DDX39A	51	76.852	Phascolarctos_cinereus
ENSODEG00000001453	-	100	77.315	ENSPPYG00000009642	DDX39A	51	77.315	Pongo_abelii
ENSODEG00000001453	-	94	78.431	ENSPCOG00000024047	-	88	79.293	Propithecus_coquereli
ENSODEG00000001453	-	94	76.471	ENSPCOG00000027926	-	51	77.778	Propithecus_coquereli
ENSODEG00000001453	-	94	78.922	ENSPVAG00000006950	DDX39A	51	80.093	Pteropus_vampyrus
ENSODEG00000001453	-	100	78.704	ENSRNOG00000004373	Ddx39a	51	78.704	Rattus_norvegicus
ENSODEG00000001453	-	100	77.315	ENSRBIG00000036352	DDX39A	81	77.315	Rhinopithecus_bieti
ENSODEG00000001453	-	100	77.315	ENSRROG00000027985	DDX39A	81	77.315	Rhinopithecus_roxellana
ENSODEG00000001453	-	91	76.768	ENSSBOG00000034939	DDX39A	81	77.315	Saimiri_boliviensis_boliviensis
ENSODEG00000001453	-	94	75.980	ENSSHAG00000005494	DDX39A	51	77.315	Sarcophilus_harrisii
ENSODEG00000001453	-	94	77.941	ENSTTRG00000007931	DDX39A	51	79.167	Tursiops_truncatus
ENSODEG00000001453	-	94	78.922	ENSUAMG00000020022	DDX39A	51	80.093	Ursus_americanus
ENSODEG00000001453	-	100	80.093	ENSUMAG00000004317	DDX39A	94	79.798	Ursus_maritimus
ENSODEG00000001453	-	94	78.922	ENSVVUG00000026939	DDX39A	51	80.093	Vulpes_vulpes
ENSODEG00000001453	-	100	73.148	ENSXETG00000020607	ddx39a	50	73.148	Xenopus_tropicalis