EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001511 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 836 bases
Position: chrJH651721.1:2019788-2020623
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000001929	KH_1	PF00013.29	8e-08	1	1
ENSODEP00000001929	ROKNT	PF08067.11	2.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000001976	-	309	-	ENSODEP00000001929	102 (aa)	-	-

Gene Model

Click here to download ENSODEG00000001511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001511	-	64	79.452	ENSODEG00000005023	-	97	79.452
ENSODEG00000001511	-	57	78.788	ENSODEG00000005039	-	80	78.788
ENSODEG00000001511	-	97	76.991	ENSODEG00000005637	HNRNPK	94	80.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001511	-	66	61.194	ENSCATG00000040500	-	92	61.194	Cercocebus_atys
ENSODEG00000001511	-	64	63.158	ENSCVAG00000022369	-	69	63.158	Cyprinodon_variegatus
ENSODEG00000001511	-	73	52.703	ENSFCAG00000039466	-	74	52.703	Felis_catus
ENSODEG00000001511	-	59	72.059	ENSJJAG00000000157	-	80	72.059	Jaculus_jaculus
ENSODEG00000001511	-	61	75.714	ENSJJAG00000007328	-	55	75.714	Jaculus_jaculus
ENSODEG00000001511	-	59	80.882	ENSJJAG00000021068	-	91	80.882	Jaculus_jaculus
ENSODEG00000001511	-	66	61.194	ENSMFAG00000002848	-	92	61.194	Macaca_fascicularis
ENSODEG00000001511	-	66	61.194	ENSMLEG00000043587	-	92	61.194	Mandrillus_leucophaeus
ENSODEG00000001511	-	66	66.234	ENSMMOG00000000027	-	96	66.234	Mola_mola
ENSODEG00000001511	-	80	58.537	ENSNLEG00000035266	-	92	58.537	Nomascus_leucogenys
ENSODEG00000001511	-	60	76.812	ENSPCIG00000022246	-	79	76.812	Phascolarctos_cinereus
ENSODEG00000001511	-	80	56.044	ENSPCIG00000023538	-	100	56.044	Phascolarctos_cinereus
ENSODEG00000001511	-	64	70.149	ENSSBOG00000005225	-	92	70.149	Saimiri_boliviensis_boliviensis