EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000001617 (Gene tree)
Gene ID: 101584622
Gene Symbol: PARN
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 190643 bases
Position: chrJH651710.1:1307958-1498600
Accession: 101584622
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000002064	RNA_bind	PF08675.11	3.2e-32	1	1
ENSODEP00000002064	CAF1	PF04857.20	1.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000002116	PARN-201	1797	XM_012517587	ENSODEP00000002064	598 (aa)	-	-

Gene Model

Click here to download ENSODEG00000001617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001617	PARN	100	82.087	ENSG00000140694	PARN	100	98.305	Homo_sapiens
ENSODEG00000001617	PARN	100	80.685	ENSAMEG00000011208	PARN	100	80.685	Ailuropoda_melanoleuca
ENSODEG00000001617	PARN	85	73.764	ENSACIG00000000619	parn	83	73.764	Amphilophus_citrinellus
ENSODEG00000001617	PARN	92	67.591	ENSAOCG00000003465	parn	84	67.591	Amphiprion_ocellaris
ENSODEG00000001617	PARN	75	69.958	ENSAPEG00000010661	parn	91	69.958	Amphiprion_percula
ENSODEG00000001617	PARN	91	68.631	ENSATEG00000004661	parn	84	68.631	Anabas_testudineus
ENSODEG00000001617	PARN	99	74.961	ENSAPLG00000013914	PARN	99	74.961	Anas_platyrhynchos
ENSODEG00000001617	PARN	100	69.372	ENSACAG00000004973	PARN	100	69.863	Anolis_carolinensis
ENSODEG00000001617	PARN	100	81.308	ENSANAG00000031516	PARN	100	98.305	Aotus_nancymaae
ENSODEG00000001617	PARN	92	68.284	ENSACLG00000004742	parn	85	68.284	Astatotilapia_calliptera
ENSODEG00000001617	PARN	92	68.293	ENSAMXG00000012390	parn	94	64.786	Astyanax_mexicanus
ENSODEG00000001617	PARN	100	79.456	ENSBTAG00000018097	PARN	100	80.345	Bos_taurus
ENSODEG00000001617	PARN	100	81.931	ENSCJAG00000015866	PARN	100	98.305	Callithrix_jacchus
ENSODEG00000001617	PARN	100	80.967	ENSCAFG00000018795	PARN	100	80.967	Canis_familiaris
ENSODEG00000001617	PARN	100	81.123	ENSCAFG00020024126	PARN	100	81.123	Canis_lupus_dingo
ENSODEG00000001617	PARN	100	81.903	ENSCHIG00000018143	PARN	100	81.903	Capra_hircus
ENSODEG00000001617	PARN	75	64.859	ENSCAPG00000007984	PARN	78	64.859	Cavia_aperea
ENSODEG00000001617	PARN	100	89.127	ENSCPOG00000002263	PARN	100	89.127	Cavia_porcellus
ENSODEG00000001617	PARN	100	81.776	ENSCCAG00000030367	PARN	100	98.305	Cebus_capucinus
ENSODEG00000001617	PARN	100	77.760	ENSCATG00000041368	PARN	100	98.305	Cercocebus_atys
ENSODEG00000001617	PARN	100	86.094	ENSCLAG00000015406	PARN	99	86.094	Chinchilla_lanigera
ENSODEG00000001617	PARN	100	81.931	ENSCSAG00000008142	PARN	100	81.931	Chlorocebus_sabaeus
ENSODEG00000001617	PARN	99	64.826	ENSCHOG00000007014	PARN	100	64.826	Choloepus_hoffmanni
ENSODEG00000001617	PARN	84	75.686	ENSCPBG00000006609	PARN	94	75.824	Chrysemys_picta_bellii
ENSODEG00000001617	PARN	82	40.672	ENSCING00000010142	-	99	40.374	Ciona_intestinalis
ENSODEG00000001617	PARN	100	74.383	ENSCANG00000028849	-	100	98.305	Colobus_angolensis_palliatus
ENSODEG00000001617	PARN	100	78.583	ENSCGRG00001012096	Parn	100	78.583	Cricetulus_griseus_chok1gshd
ENSODEG00000001617	PARN	100	78.583	ENSCGRG00000004939	Parn	100	78.583	Cricetulus_griseus_crigri
ENSODEG00000001617	PARN	91	67.014	ENSCSEG00000002064	parn	83	67.014	Cynoglossus_semilaevis
ENSODEG00000001617	PARN	85	71.243	ENSCVAG00000014848	parn	79	71.243	Cyprinodon_variegatus
ENSODEG00000001617	PARN	89	65.317	ENSDARG00000102634	parn	87	65.317	Danio_rerio
ENSODEG00000001617	PARN	100	81.279	ENSDNOG00000000833	PARN	97	84.477	Dasypus_novemcinctus
ENSODEG00000001617	PARN	74	78.707	ENSETEG00000014828	-	69	78.707	Echinops_telfairi
ENSODEG00000001617	PARN	100	81.123	ENSEASG00005011400	PARN	100	81.123	Equus_asinus_asinus
ENSODEG00000001617	PARN	100	80.811	ENSECAG00000017792	PARN	100	80.811	Equus_caballus
ENSODEG00000001617	PARN	83	80.952	ENSEEUG00000010370	PARN	84	80.952	Erinaceus_europaeus
ENSODEG00000001617	PARN	85	69.331	ENSELUG00000013139	parn	71	69.331	Esox_lucius
ENSODEG00000001617	PARN	100	81.903	ENSFCAG00000044961	PARN	100	94.915	Felis_catus
ENSODEG00000001617	PARN	99	74.606	ENSFALG00000003911	PARN	98	74.606	Ficedula_albicollis
ENSODEG00000001617	PARN	100	85.805	ENSFDAG00000009234	PARN	100	85.805	Fukomys_damarensis
ENSODEG00000001617	PARN	91	66.028	ENSFHEG00000013738	parn	92	77.966	Fundulus_heteroclitus
ENSODEG00000001617	PARN	85	69.759	ENSGMOG00000003231	parn	97	69.759	Gadus_morhua
ENSODEG00000001617	PARN	100	73.520	ENSGALG00000003091	PARN	100	73.520	Gallus_gallus
ENSODEG00000001617	PARN	90	68.476	ENSGAFG00000011061	parn	84	68.221	Gambusia_affinis
ENSODEG00000001617	PARN	85	69.944	ENSGACG00000019501	parn	100	63.708	Gasterosteus_aculeatus
ENSODEG00000001617	PARN	52	74.772	ENSGAGG00000023281	PARN	83	75.000	Gopherus_agassizii
ENSODEG00000001617	PARN	97	82.212	ENSGGOG00000025224	PARN	100	98.305	Gorilla_gorilla
ENSODEG00000001617	PARN	92	68.284	ENSHBUG00000017906	parn	90	71.614	Haplochromis_burtoni
ENSODEG00000001617	PARN	100	85.469	ENSHGLG00000010886	PARN	100	85.469	Heterocephalus_glaber_female
ENSODEG00000001617	PARN	100	85.469	ENSHGLG00100014659	PARN	100	85.469	Heterocephalus_glaber_male
ENSODEG00000001617	PARN	84	66.541	ENSHCOG00000008683	parn	91	66.541	Hippocampus_comes
ENSODEG00000001617	PARN	85	60.377	ENSIPUG00000012401	parn	79	60.377	Ictalurus_punctatus
ENSODEG00000001617	PARN	100	82.344	ENSSTOG00000007519	PARN	100	82.344	Ictidomys_tridecemlineatus
ENSODEG00000001617	PARN	100	80.666	ENSJJAG00000023049	Parn	100	80.666	Jaculus_jaculus
ENSODEG00000001617	PARN	85	71.614	ENSKMAG00000009462	parn	79	71.614	Kryptolebias_marmoratus
ENSODEG00000001617	PARN	92	67.069	ENSLBEG00000009167	parn	90	67.069	Labrus_bergylta
ENSODEG00000001617	PARN	80	70.809	ENSLACG00000004207	PARN	100	68.618	Latimeria_chalumnae
ENSODEG00000001617	PARN	92	70.017	ENSLOCG00000000715	parn	85	69.535	Lepisosteus_oculatus
ENSODEG00000001617	PARN	100	82.650	ENSLAFG00000015036	PARN	100	82.650	Loxodonta_africana
ENSODEG00000001617	PARN	100	80.564	ENSMFAG00000044852	PARN	100	98.305	Macaca_fascicularis
ENSODEG00000001617	PARN	100	81.776	ENSMMUG00000018849	PARN	100	98.305	Macaca_mulatta
ENSODEG00000001617	PARN	100	81.931	ENSMNEG00000045108	PARN	100	98.305	Macaca_nemestrina
ENSODEG00000001617	PARN	100	81.776	ENSMLEG00000031743	PARN	100	98.305	Mandrillus_leucophaeus
ENSODEG00000001617	PARN	85	70.872	ENSMAMG00000006939	parn	78	70.872	Mastacembelus_armatus
ENSODEG00000001617	PARN	100	62.145	ENSMZEG00005013590	parn	90	68.807	Maylandia_zebra
ENSODEG00000001617	PARN	95	73.813	ENSMGAG00000001004	PARN	95	73.813	Meleagris_gallopavo
ENSODEG00000001617	PARN	100	75.000	ENSMAUG00000008025	Parn	100	75.000	Mesocricetus_auratus
ENSODEG00000001617	PARN	100	82.527	ENSMICG00000016053	PARN	100	96.610	Microcebus_murinus
ENSODEG00000001617	PARN	79	82.093	ENSMOCG00000022211	Parn	100	82.093	Microtus_ochrogaster
ENSODEG00000001617	PARN	85	70.113	ENSMMOG00000011333	parn	87	70.113	Mola_mola
ENSODEG00000001617	PARN	79	83.567	ENSMODG00000004915	PARN	99	83.567	Monodelphis_domestica
ENSODEG00000001617	PARN	85	71.667	ENSMALG00000019426	parn	91	71.667	Monopterus_albus
ENSODEG00000001617	PARN	100	77.760	MGP_CAROLIEiJ_G0020466	Parn	100	77.760	Mus_caroli
ENSODEG00000001617	PARN	100	78.233	ENSMUSG00000022685	Parn	100	91.463	Mus_musculus
ENSODEG00000001617	PARN	100	77.760	MGP_PahariEiJ_G0016172	Parn	100	77.760	Mus_pahari
ENSODEG00000001617	PARN	100	78.391	MGP_SPRETEiJ_G0021361	Parn	100	78.391	Mus_spretus
ENSODEG00000001617	PARN	100	81.123	ENSMPUG00000014464	PARN	100	81.123	Mustela_putorius_furo
ENSODEG00000001617	PARN	79	83.702	ENSMLUG00000005414	PARN	100	83.702	Myotis_lucifugus
ENSODEG00000001617	PARN	85	71.563	ENSNBRG00000006805	parn	90	71.563	Neolamprologus_brichardi
ENSODEG00000001617	PARN	100	81.776	ENSNLEG00000010241	PARN	100	98.305	Nomascus_leucogenys
ENSODEG00000001617	PARN	85	91.892	ENSMEUG00000008178	-	84	91.892	Notamacropus_eugenii
ENSODEG00000001617	PARN	99	78.549	ENSOPRG00000012187	PARN	100	78.549	Ochotona_princeps
ENSODEG00000001617	PARN	100	62.840	ENSONIG00000000151	parn	100	63.567	Oreochromis_niloticus
ENSODEG00000001617	PARN	61	76.640	ENSOANG00000020155	-	97	75.844	Ornithorhynchus_anatinus
ENSODEG00000001617	PARN	99	81.890	ENSOCUG00000000322	PARN	99	81.890	Oryctolagus_cuniculus
ENSODEG00000001617	PARN	94	65.829	ENSORLG00020010313	parn	85	68.007	Oryzias_latipes_hni
ENSODEG00000001617	PARN	94	65.662	ENSORLG00015000300	parn	85	67.832	Oryzias_latipes_hsok
ENSODEG00000001617	PARN	91	67.944	ENSOMEG00000019555	parn	85	67.944	Oryzias_melastigma
ENSODEG00000001617	PARN	79	84.137	ENSOGAG00000014626	PARN	100	84.137	Otolemur_garnettii
ENSODEG00000001617	PARN	79	86.318	ENSOARG00000007574	PARN	100	86.318	Ovis_aries
ENSODEG00000001617	PARN	100	82.087	ENSPPAG00000031438	PARN	100	98.305	Pan_paniscus
ENSODEG00000001617	PARN	100	81.747	ENSPPRG00000018583	PARN	100	94.915	Panthera_pardus
ENSODEG00000001617	PARN	100	81.747	ENSPTIG00000012135	PARN	100	94.915	Panthera_tigris_altaica
ENSODEG00000001617	PARN	100	81.776	ENSPTRG00000007792	PARN	100	98.305	Pan_troglodytes
ENSODEG00000001617	PARN	100	78.816	ENSPANG00000020099	PARN	100	98.305	Papio_anubis
ENSODEG00000001617	PARN	90	67.365	ENSPKIG00000022807	parn	84	67.041	Paramormyrops_kingsleyae
ENSODEG00000001617	PARN	94	75.822	ENSPSIG00000014804	PARN	100	73.276	Pelodiscus_sinensis
ENSODEG00000001617	PARN	82	70.793	ENSPMGG00000014431	parn	77	67.684	Periophthalmus_magnuspinnatus
ENSODEG00000001617	PARN	100	75.868	ENSPEMG00000018439	Parn	100	75.868	Peromyscus_maniculatus_bairdii
ENSODEG00000001617	PARN	83	61.185	ENSPMAG00000003956	parn	99	61.185	Petromyzon_marinus
ENSODEG00000001617	PARN	67	78.271	ENSPCIG00000001259	PARN	91	89.831	Phascolarctos_cinereus
ENSODEG00000001617	PARN	90	68.717	ENSPFOG00000012823	parn	84	67.876	Poecilia_formosa
ENSODEG00000001617	PARN	90	68.893	ENSPLAG00000006395	parn	84	68.048	Poecilia_latipinna
ENSODEG00000001617	PARN	90	68.893	ENSPMEG00000007711	parn	84	68.631	Poecilia_mexicana
ENSODEG00000001617	PARN	90	68.541	ENSPREG00000000147	parn	84	68.284	Poecilia_reticulata
ENSODEG00000001617	PARN	100	81.211	ENSPPYG00000007123	PARN	100	81.211	Pongo_abelii
ENSODEG00000001617	PARN	94	71.057	ENSPCAG00000001741	PARN	100	71.057	Procavia_capensis
ENSODEG00000001617	PARN	100	79.875	ENSPCOG00000019292	PARN	100	96.610	Propithecus_coquereli
ENSODEG00000001617	PARN	99	77.287	ENSPVAG00000002547	PARN	100	77.287	Pteropus_vampyrus
ENSODEG00000001617	PARN	100	61.943	ENSPNYG00000006835	parn	90	68.646	Pundamilia_nyererei
ENSODEG00000001617	PARN	83	67.437	ENSPNAG00000018905	parn	85	67.437	Pygocentrus_nattereri
ENSODEG00000001617	PARN	100	75.000	ENSRNOG00000002912	Parn	100	75.000	Rattus_norvegicus
ENSODEG00000001617	PARN	52	80.363	ENSRBIG00000018726	PARN	99	80.363	Rhinopithecus_bieti
ENSODEG00000001617	PARN	52	80.363	ENSRROG00000011162	-	99	80.363	Rhinopithecus_roxellana
ENSODEG00000001617	PARN	100	82.862	ENSSBOG00000034726	PARN	100	98.305	Saimiri_boliviensis_boliviensis
ENSODEG00000001617	PARN	66	81.667	ENSSHAG00000008493	PARN	93	81.667	Sarcophilus_harrisii
ENSODEG00000001617	PARN	96	64.983	ENSSFOG00015014165	parn	96	66.321	Scleropages_formosus
ENSODEG00000001617	PARN	100	58.411	ENSSMAG00000000685	parn	100	58.529	Scophthalmus_maximus
ENSODEG00000001617	PARN	91	67.703	ENSSDUG00000014555	parn	84	67.703	Seriola_dumerili
ENSODEG00000001617	PARN	81	82.151	ENSSARG00000014339	PARN	88	82.151	Sorex_araneus
ENSODEG00000001617	PARN	100	76.443	ENSSPUG00000007719	PARN	100	76.443	Sphenodon_punctatus
ENSODEG00000001617	PARN	91	68.870	ENSSPAG00000007095	parn	86	68.173	Stegastes_partitus
ENSODEG00000001617	PARN	100	80.343	ENSSSCG00000007878	PARN	89	80.343	Sus_scrofa
ENSODEG00000001617	PARN	99	74.173	ENSTGUG00000004971	PARN	99	74.173	Taeniopygia_guttata
ENSODEG00000001617	PARN	100	63.307	ENSTNIG00000008252	parn	100	63.622	Tetraodon_nigroviridis
ENSODEG00000001617	PARN	90	70.069	ENSTBEG00000010407	PARN	100	70.069	Tupaia_belangeri
ENSODEG00000001617	PARN	99	76.498	ENSTTRG00000002843	PARN	100	76.498	Tursiops_truncatus
ENSODEG00000001617	PARN	69	76.835	ENSUAMG00000008283	PARN	90	76.835	Ursus_americanus
ENSODEG00000001617	PARN	100	81.123	ENSUMAG00000004527	PARN	100	81.123	Ursus_maritimus
ENSODEG00000001617	PARN	93	78.869	ENSVPAG00000008968	PARN	97	79.000	Vicugna_pacos
ENSODEG00000001617	PARN	100	81.591	ENSVVUG00000019509	PARN	100	81.591	Vulpes_vulpes
ENSODEG00000001617	PARN	100	66.874	ENSXETG00000010994	parn	100	74.291	Xenopus_tropicalis
ENSODEG00000001617	PARN	89	66.135	ENSXCOG00000015990	parn	96	65.625	Xiphophorus_couchianus
ENSODEG00000001617	PARN	91	68.512	ENSXMAG00000014783	parn	84	68.512	Xiphophorus_maculatus