EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001703 (Gene tree)
Gene ID: 101572362
Gene Symbol: -
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 2270 bases
Position: chrJH651704.1:2387593-2389862
Accession: 101572362
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000002180	Exo_endo_phos	PF03372.23	1.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000002233	-	954	XM_004649062	ENSODEP00000002180	317 (aa)	XP_004649119	-

Gene Model

Click here to download ENSODEG00000001703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001703's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001703	-	100	75.000	ENSODEG00000006583	-	100	75.000
ENSODEG00000001703	-	97	78.896	ENSODEG00000004777	-	99	78.896

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001703	-	100	94.654	ENSG00000100823	APEX1	100	94.654	Homo_sapiens
ENSODEG00000001703	-	88	69.892	ENSAPOG00000017002	apex1	94	68.858	Acanthochromis_polyacanthus
ENSODEG00000001703	-	100	97.170	ENSAMEG00000005418	APEX1	100	97.170	Ailuropoda_melanoleuca
ENSODEG00000001703	-	87	71.223	ENSACIG00000010653	apex1	97	70.242	Amphilophus_citrinellus
ENSODEG00000001703	-	88	69.534	ENSAOCG00000009649	apex1	93	68.512	Amphiprion_ocellaris
ENSODEG00000001703	-	88	69.534	ENSAPEG00000021453	apex1	93	68.512	Amphiprion_percula
ENSODEG00000001703	-	86	71.636	ENSATEG00000002883	apex1	97	67.405	Anabas_testudineus
ENSODEG00000001703	-	100	70.186	ENSACAG00000008099	APEX1	100	70.186	Anolis_carolinensis
ENSODEG00000001703	-	100	94.969	ENSANAG00000030117	APEX1	100	94.969	Aotus_nancymaae
ENSODEG00000001703	-	87	71.739	ENSACLG00000018441	apex1	99	66.772	Astatotilapia_calliptera
ENSODEG00000001703	-	100	65.625	ENSAMXG00000034699	apex1	100	65.625	Astyanax_mexicanus
ENSODEG00000001703	-	100	94.969	ENSBTAG00000002745	APEX1	100	94.969	Bos_taurus
ENSODEG00000001703	-	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSODEG00000001703	-	100	95.597	ENSCJAG00000009726	APEX1	100	95.597	Callithrix_jacchus
ENSODEG00000001703	-	100	94.340	ENSCAFG00000032033	APEX1	100	94.340	Canis_familiaris
ENSODEG00000001703	-	54	90.698	ENSCAFG00020023002	-	96	90.698	Canis_lupus_dingo
ENSODEG00000001703	-	100	94.340	ENSCAFG00020014377	-	100	94.340	Canis_lupus_dingo
ENSODEG00000001703	-	98	76.603	ENSCHIG00000014537	-	99	76.603	Capra_hircus
ENSODEG00000001703	-	100	94.340	ENSCHIG00000007298	-	100	94.340	Capra_hircus
ENSODEG00000001703	-	100	95.283	ENSTSYG00000034813	APEX1	100	95.283	Carlito_syrichta
ENSODEG00000001703	-	84	89.963	ENSCAPG00000016235	APEX1	91	98.729	Cavia_aperea
ENSODEG00000001703	-	100	97.170	ENSCPOG00000030909	APEX1	100	97.170	Cavia_porcellus
ENSODEG00000001703	-	100	82.390	ENSCCAG00000031931	-	100	82.390	Cebus_capucinus
ENSODEG00000001703	-	100	95.597	ENSCCAG00000033056	-	100	95.597	Cebus_capucinus
ENSODEG00000001703	-	100	94.340	ENSCATG00000015580	APEX1	100	94.340	Cercocebus_atys
ENSODEG00000001703	-	100	97.799	ENSCLAG00000001002	APEX1	100	97.799	Chinchilla_lanigera
ENSODEG00000001703	-	100	94.025	ENSCSAG00000016670	-	100	94.025	Chlorocebus_sabaeus
ENSODEG00000001703	-	100	94.025	ENSCSAG00000016685	-	100	94.025	Chlorocebus_sabaeus
ENSODEG00000001703	-	100	70.533	ENSCPBG00000009567	APEX1	100	70.533	Chrysemys_picta_bellii
ENSODEG00000001703	-	95	53.571	ENSCING00000008137	-	97	53.571	Ciona_intestinalis
ENSODEG00000001703	-	84	51.321	ENSCSAVG00000007144	-	100	51.737	Ciona_savignyi
ENSODEG00000001703	-	100	94.654	ENSCANG00000030726	APEX1	100	94.654	Colobus_angolensis_palliatus
ENSODEG00000001703	-	100	91.195	ENSCGRG00001017046	Apex1	100	91.195	Cricetulus_griseus_chok1gshd
ENSODEG00000001703	-	100	91.195	ENSCGRG00000008984	Apex1	100	91.195	Cricetulus_griseus_crigri
ENSODEG00000001703	-	99	64.353	ENSCSEG00000017499	apex1	99	64.353	Cynoglossus_semilaevis
ENSODEG00000001703	-	88	71.685	ENSCVAG00000022075	apex1	99	66.772	Cyprinodon_variegatus
ENSODEG00000001703	-	100	65.723	ENSDARG00000045843	apex1	100	66.038	Danio_rerio
ENSODEG00000001703	-	100	90.566	ENSDNOG00000042234	APEX1	95	90.566	Dasypus_novemcinctus
ENSODEG00000001703	-	100	96.226	ENSDORG00000001616	Apex1	100	96.226	Dipodomys_ordii
ENSODEG00000001703	-	100	93.711	ENSETEG00000004855	-	100	93.711	Echinops_telfairi
ENSODEG00000001703	-	75	64.854	ENSEBUG00000000622	-	92	64.854	Eptatretus_burgeri
ENSODEG00000001703	-	100	96.541	ENSEASG00005017489	APEX1	74	96.541	Equus_asinus_asinus
ENSODEG00000001703	-	100	96.541	ENSECAG00000022325	APEX1	82	96.541	Equus_caballus
ENSODEG00000001703	-	91	94.792	ENSEEUG00000012569	APEX1	100	94.792	Erinaceus_europaeus
ENSODEG00000001703	-	100	65.723	ENSELUG00000021706	apex1	100	65.723	Esox_lucius
ENSODEG00000001703	-	100	97.484	ENSFCAG00000030869	APEX1	100	97.484	Felis_catus
ENSODEG00000001703	-	100	96.855	ENSFDAG00000006120	APEX1	100	96.855	Fukomys_damarensis
ENSODEG00000001703	-	99	68.354	ENSFHEG00000009031	apex1	83	68.354	Fundulus_heteroclitus
ENSODEG00000001703	-	99	61.950	ENSGMOG00000007943	apex1	99	61.950	Gadus_morhua
ENSODEG00000001703	-	88	72.760	ENSGAFG00000005311	apex1	99	67.722	Gambusia_affinis
ENSODEG00000001703	-	99	65.506	ENSGACG00000019497	apex1	99	69.549	Gasterosteus_aculeatus
ENSODEG00000001703	-	100	70.219	ENSGAGG00000014999	APEX1	100	70.219	Gopherus_agassizii
ENSODEG00000001703	-	100	94.969	ENSGGOG00000002128	APEX1	100	94.969	Gorilla_gorilla
ENSODEG00000001703	-	99	66.139	ENSHBUG00000005894	apex1	99	66.456	Haplochromis_burtoni
ENSODEG00000001703	-	100	98.113	ENSHGLG00000002848	APEX1	100	98.113	Heterocephalus_glaber_female
ENSODEG00000001703	-	100	98.113	ENSHGLG00100017878	APEX1	100	98.113	Heterocephalus_glaber_male
ENSODEG00000001703	-	99	65.723	ENSHCOG00000009961	apex1	99	65.723	Hippocampus_comes
ENSODEG00000001703	-	100	67.712	ENSIPUG00000005799	apex1	100	67.712	Ictalurus_punctatus
ENSODEG00000001703	-	100	94.654	ENSSTOG00000010096	APEX1	100	94.654	Ictidomys_tridecemlineatus
ENSODEG00000001703	-	94	85.906	ENSJJAG00000020465	-	96	85.906	Jaculus_jaculus
ENSODEG00000001703	-	100	85.849	ENSJJAG00000003660	-	100	85.849	Jaculus_jaculus
ENSODEG00000001703	-	100	95.283	ENSJJAG00000012067	-	100	95.283	Jaculus_jaculus
ENSODEG00000001703	-	88	71.326	ENSKMAG00000021171	apex1	99	66.456	Kryptolebias_marmoratus
ENSODEG00000001703	-	88	68.459	ENSLBEG00000010248	apex1	99	64.353	Labrus_bergylta
ENSODEG00000001703	-	100	67.188	ENSLACG00000008617	APEX1	100	67.188	Latimeria_chalumnae
ENSODEG00000001703	-	100	65.839	ENSLOCG00000015516	apex1	99	65.839	Lepisosteus_oculatus
ENSODEG00000001703	-	100	93.396	ENSLAFG00000021872	APEX1	100	93.396	Loxodonta_africana
ENSODEG00000001703	-	100	94.340	ENSMFAG00000002565	APEX1	100	94.340	Macaca_fascicularis
ENSODEG00000001703	-	100	94.340	ENSMMUG00000048039	APEX1	100	94.340	Macaca_mulatta
ENSODEG00000001703	-	100	94.340	ENSMNEG00000036944	APEX1	100	94.340	Macaca_nemestrina
ENSODEG00000001703	-	100	94.340	ENSMLEG00000042125	APEX1	100	94.340	Mandrillus_leucophaeus
ENSODEG00000001703	-	88	71.685	ENSMAMG00000023526	apex1	99	67.508	Mastacembelus_armatus
ENSODEG00000001703	-	87	71.739	ENSMZEG00005014187	apex1	99	66.772	Maylandia_zebra
ENSODEG00000001703	-	100	92.138	ENSMAUG00000013994	Apex1	100	92.138	Mesocricetus_auratus
ENSODEG00000001703	-	100	95.912	ENSMICG00000043554	APEX1	100	95.912	Microcebus_murinus
ENSODEG00000001703	-	100	92.767	ENSMOCG00000013721	Apex1	100	92.767	Microtus_ochrogaster
ENSODEG00000001703	-	88	67.857	ENSMMOG00000010031	apex1	97	63.522	Mola_mola
ENSODEG00000001703	-	100	83.750	ENSMODG00000007125	APEX1	100	85.404	Monodelphis_domestica
ENSODEG00000001703	-	88	64.158	ENSMALG00000011699	apex1	79	62.799	Monopterus_albus
ENSODEG00000001703	-	99	94.006	MGP_CAROLIEiJ_G0019209	Apex1	99	94.006	Mus_caroli
ENSODEG00000001703	-	100	94.654	ENSMUSG00000035960	Apex1	100	94.654	Mus_musculus
ENSODEG00000001703	-	100	94.025	MGP_PahariEiJ_G0030232	Apex1	100	94.025	Mus_pahari
ENSODEG00000001703	-	100	94.654	MGP_SPRETEiJ_G0020101	Apex1	100	94.654	Mus_spretus
ENSODEG00000001703	-	100	95.000	ENSMLUG00000028957	APEX1	100	95.000	Myotis_lucifugus
ENSODEG00000001703	-	100	94.969	ENSNGAG00000002725	-	100	94.969	Nannospalax_galili
ENSODEG00000001703	-	100	71.698	ENSNGAG00000021748	-	99	71.698	Nannospalax_galili
ENSODEG00000001703	-	87	71.377	ENSNBRG00000005334	apex1	91	66.456	Neolamprologus_brichardi
ENSODEG00000001703	-	100	94.654	ENSNLEG00000010839	APEX1	100	94.654	Nomascus_leucogenys
ENSODEG00000001703	-	100	86.478	ENSMEUG00000014519	APEX1	100	86.478	Notamacropus_eugenii
ENSODEG00000001703	-	100	93.711	ENSOPRG00000014029	APEX1	100	93.711	Ochotona_princeps
ENSODEG00000001703	-	87	71.942	ENSONIG00000012089	apex1	99	67.089	Oreochromis_niloticus
ENSODEG00000001703	-	90	82.807	ENSOANG00000008836	APEX1	80	79.012	Ornithorhynchus_anatinus
ENSODEG00000001703	-	100	94.025	ENSOCUG00000005022	APEX1	100	94.025	Oryctolagus_cuniculus
ENSODEG00000001703	-	99	66.981	ENSORLG00000012378	apex1	99	67.296	Oryzias_latipes
ENSODEG00000001703	-	99	66.981	ENSORLG00020021371	apex1	99	67.296	Oryzias_latipes_hni
ENSODEG00000001703	-	99	66.981	ENSORLG00015020089	apex1	99	67.296	Oryzias_latipes_hsok
ENSODEG00000001703	-	99	66.981	ENSOMEG00000018876	apex1	99	67.296	Oryzias_melastigma
ENSODEG00000001703	-	100	95.283	ENSOGAG00000013335	-	100	95.283	Otolemur_garnettii
ENSODEG00000001703	-	98	84.615	ENSOGAG00000029355	-	100	84.615	Otolemur_garnettii
ENSODEG00000001703	-	100	93.711	ENSOARG00000019740	-	100	93.711	Ovis_aries
ENSODEG00000001703	-	99	80.380	ENSOARG00000014424	-	100	80.380	Ovis_aries
ENSODEG00000001703	-	97	90.584	ENSOARG00000001876	-	100	90.584	Ovis_aries
ENSODEG00000001703	-	100	94.969	ENSPPAG00000038760	APEX1	100	94.969	Pan_paniscus
ENSODEG00000001703	-	100	97.170	ENSPPRG00000011794	APEX1	100	97.170	Panthera_pardus
ENSODEG00000001703	-	100	97.484	ENSPTIG00000014829	APEX1	100	97.484	Panthera_tigris_altaica
ENSODEG00000001703	-	100	94.969	ENSPTRG00000006093	APEX1	100	94.969	Pan_troglodytes
ENSODEG00000001703	-	100	94.340	ENSPANG00000022757	APEX1	100	94.340	Papio_anubis
ENSODEG00000001703	-	87	68.953	ENSPKIG00000003504	apex1	100	64.596	Paramormyrops_kingsleyae
ENSODEG00000001703	-	76	66.667	ENSPMGG00000016596	apex1	73	66.667	Periophthalmus_magnuspinnatus
ENSODEG00000001703	-	100	94.025	ENSPEMG00000019097	Apex1	100	94.025	Peromyscus_maniculatus_bairdii
ENSODEG00000001703	-	94	65.333	ENSPMAG00000007275	-	99	65.333	Petromyzon_marinus
ENSODEG00000001703	-	100	83.386	ENSPCIG00000023274	APEX1	100	85.358	Phascolarctos_cinereus
ENSODEG00000001703	-	88	73.118	ENSPFOG00000004178	apex1	99	68.454	Poecilia_formosa
ENSODEG00000001703	-	88	72.760	ENSPLAG00000012779	apex1	99	68.454	Poecilia_latipinna
ENSODEG00000001703	-	88	73.118	ENSPMEG00000019623	apex1	99	68.454	Poecilia_mexicana
ENSODEG00000001703	-	88	72.401	ENSPREG00000014298	apex1	99	67.823	Poecilia_reticulata
ENSODEG00000001703	-	100	94.654	ENSPPYG00000005565	APEX1	100	94.654	Pongo_abelii
ENSODEG00000001703	-	100	91.195	ENSPCAG00000010376	APEX1	100	91.195	Procavia_capensis
ENSODEG00000001703	-	100	95.912	ENSPCOG00000021564	APEX1	100	95.912	Propithecus_coquereli
ENSODEG00000001703	-	100	95.312	ENSPVAG00000010736	APEX1	100	95.312	Pteropus_vampyrus
ENSODEG00000001703	-	87	71.739	ENSPNYG00000023940	apex1	99	66.772	Pundamilia_nyererei
ENSODEG00000001703	-	93	65.878	ENSPNAG00000020897	apex1	96	65.763	Pygocentrus_nattereri
ENSODEG00000001703	-	100	93.711	ENSRNOG00000009663	Apex1	100	93.711	Rattus_norvegicus
ENSODEG00000001703	-	100	94.340	ENSRBIG00000038325	APEX1	99	94.340	Rhinopithecus_bieti
ENSODEG00000001703	-	100	80.503	ENSSBOG00000031372	-	100	80.503	Saimiri_boliviensis_boliviensis
ENSODEG00000001703	-	100	95.283	ENSSBOG00000018921	-	100	95.283	Saimiri_boliviensis_boliviensis
ENSODEG00000001703	-	100	82.407	ENSSHAG00000013524	APEX1	100	83.742	Sarcophilus_harrisii
ENSODEG00000001703	-	100	63.208	ENSSFOG00015001948	apex1	100	62.893	Scleropages_formosus
ENSODEG00000001703	-	87	69.784	ENSSMAG00000013348	apex1	99	65.931	Scophthalmus_maximus
ENSODEG00000001703	-	99	65.506	ENSSDUG00000016377	apex1	99	65.506	Seriola_dumerili
ENSODEG00000001703	-	99	66.139	ENSSLDG00000023005	apex1	99	66.139	Seriola_lalandi_dorsalis
ENSODEG00000001703	-	95	71.096	ENSSPUG00000000531	APEX1	99	71.096	Sphenodon_punctatus
ENSODEG00000001703	-	88	70.251	ENSSPAG00000000458	apex1	96	68.259	Stegastes_partitus
ENSODEG00000001703	-	98	55.521	ENSSSCG00000039705	-	99	58.140	Sus_scrofa
ENSODEG00000001703	-	100	95.912	ENSSSCG00000040060	-	100	95.912	Sus_scrofa
ENSODEG00000001703	-	74	60.169	ENSTGUG00000014378	APEX1	100	60.169	Taeniopygia_guttata
ENSODEG00000001703	-	87	67.986	ENSTRUG00000004268	apex1	95	63.608	Takifugu_rubripes
ENSODEG00000001703	-	99	63.924	ENSTNIG00000005778	apex1	99	63.924	Tetraodon_nigroviridis
ENSODEG00000001703	-	100	91.195	ENSTBEG00000006405	APEX1	100	91.195	Tupaia_belangeri
ENSODEG00000001703	-	74	95.763	ENSTTRG00000007860	APEX1	100	95.763	Tursiops_truncatus
ENSODEG00000001703	-	100	96.855	ENSUAMG00000010457	APEX1	100	96.855	Ursus_americanus
ENSODEG00000001703	-	100	96.855	ENSUMAG00000009178	APEX1	100	96.855	Ursus_maritimus
ENSODEG00000001703	-	74	90.254	ENSVPAG00000005083	APEX1	100	90.254	Vicugna_pacos
ENSODEG00000001703	-	100	93.711	ENSVVUG00000009010	APEX1	100	93.711	Vulpes_vulpes
ENSODEG00000001703	-	100	66.667	ENSXETG00000024773	apex1	100	66.667	Xenopus_tropicalis
ENSODEG00000001703	-	88	72.760	ENSXCOG00000015233	apex1	99	68.038	Xiphophorus_couchianus
ENSODEG00000001703	-	93	68.404	ENSXMAG00000006195	apex1	99	68.038	Xiphophorus_maculatus