EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000001715 (Gene tree)
Gene ID: 101565063
Gene Symbol: YTHDC1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 32427 bases
Position: chrJH651706.1:105835-138261
Accession: 101565063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000002198	YTH	PF04146.15	9.4e-40	1	1
ENSODEP00000002197	YTH	PF04146.15	9.7e-40	1	1
ENSODEP00000002199	YTH	PF04146.15	9.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000002252	YTHDC1-203	2199	-	ENSODEP00000002199	732 (aa)	-	-
ENSODET00000002251	YTHDC1-202	3225	XM_004644071	ENSODEP00000002198	705 (aa)	XP_004644128	UPI0003337890
ENSODET00000002250	YTHDC1-201	3279	XM_004644069	ENSODEP00000002197	723 (aa)	XP_004644126	UPI0003339324

Gene Model

Click here to download ENSODEG00000001715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001715's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001715	YTHDC1	100	97.249	ENSG00000083896	YTHDC1	100	97.249	Homo_sapiens
ENSODEG00000001715	YTHDC1	58	58.865	ENSAPOG00000013997	ythdc1	57	62.291	Acanthochromis_polyacanthus
ENSODEG00000001715	YTHDC1	100	95.753	ENSAMEG00000005688	YTHDC1	100	95.753	Ailuropoda_melanoleuca
ENSODEG00000001715	YTHDC1	71	58.513	ENSACIG00000019728	ythdc1	80	59.712	Amphilophus_citrinellus
ENSODEG00000001715	YTHDC1	57	61.009	ENSAOCG00000000239	ythdc1	59	66.986	Amphiprion_ocellaris
ENSODEG00000001715	YTHDC1	50	65.289	ENSAPEG00000000618	ythdc1	53	68.376	Amphiprion_percula
ENSODEG00000001715	YTHDC1	91	85.000	ENSAPLG00000009921	YTHDC1	92	86.364	Anas_platyrhynchos
ENSODEG00000001715	YTHDC1	93	84.627	ENSACAG00000009697	YTHDC1	93	84.627	Anolis_carolinensis
ENSODEG00000001715	YTHDC1	100	96.978	ENSANAG00000001522	YTHDC1	100	96.978	Aotus_nancymaae
ENSODEG00000001715	YTHDC1	57	59.404	ENSACLG00000019371	ythdc1	92	55.429	Astatotilapia_calliptera
ENSODEG00000001715	YTHDC1	93	64.151	ENSAMXG00000006978	ythdc1	92	65.648	Astyanax_mexicanus
ENSODEG00000001715	YTHDC1	100	95.604	ENSBTAG00000015572	YTHDC1	100	95.604	Bos_taurus
ENSODEG00000001715	YTHDC1	100	97.253	ENSCJAG00000009934	YTHDC1	100	97.253	Callithrix_jacchus
ENSODEG00000001715	YTHDC1	100	95.616	ENSCAFG00000002821	YTHDC1	100	95.616	Canis_familiaris
ENSODEG00000001715	YTHDC1	100	95.616	ENSCAFG00020027112	YTHDC1	100	95.616	Canis_lupus_dingo
ENSODEG00000001715	YTHDC1	91	87.685	ENSCHIG00000004810	YTHDC1	95	92.514	Capra_hircus
ENSODEG00000001715	YTHDC1	100	97.387	ENSTSYG00000011668	YTHDC1	100	97.387	Carlito_syrichta
ENSODEG00000001715	YTHDC1	90	69.014	ENSCAPG00000008722	YTHDC1	90	68.731	Cavia_aperea
ENSODEG00000001715	YTHDC1	100	92.022	ENSCPOG00000010929	YTHDC1	100	92.022	Cavia_porcellus
ENSODEG00000001715	YTHDC1	100	97.521	ENSCCAG00000035754	YTHDC1	100	97.521	Cebus_capucinus
ENSODEG00000001715	YTHDC1	100	97.042	ENSCATG00000036320	YTHDC1	100	97.042	Cercocebus_atys
ENSODEG00000001715	YTHDC1	99	99.140	ENSCLAG00000005482	YTHDC1	99	99.171	Chinchilla_lanigera
ENSODEG00000001715	YTHDC1	100	97.115	ENSCSAG00000005252	YTHDC1	100	97.115	Chlorocebus_sabaeus
ENSODEG00000001715	YTHDC1	92	86.807	ENSCPBG00000021965	YTHDC1	94	87.578	Chrysemys_picta_bellii
ENSODEG00000001715	YTHDC1	100	97.253	ENSCANG00000004769	YTHDC1	100	97.253	Colobus_angolensis_palliatus
ENSODEG00000001715	YTHDC1	100	95.102	ENSCGRG00001000816	Ythdc1	100	95.102	Cricetulus_griseus_chok1gshd
ENSODEG00000001715	YTHDC1	99	93.593	ENSCGRG00000009807	Ythdc1	99	93.593	Cricetulus_griseus_crigri
ENSODEG00000001715	YTHDC1	57	60.714	ENSCSEG00000020404	ythdc1	59	66.427	Cynoglossus_semilaevis
ENSODEG00000001715	YTHDC1	57	60.000	ENSCVAG00000022349	ythdc1	59	64.819	Cyprinodon_variegatus
ENSODEG00000001715	YTHDC1	93	63.583	ENSDARG00000051953	ythdc1	92	63.743	Danio_rerio
ENSODEG00000001715	YTHDC1	93	94.478	ENSDNOG00000004949	YTHDC1	93	93.731	Dasypus_novemcinctus
ENSODEG00000001715	YTHDC1	99	96.936	ENSDORG00000013045	Ythdc1	100	96.936	Dipodomys_ordii
ENSODEG00000001715	YTHDC1	79	100.000	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSODEG00000001715	YTHDC1	100	96.164	ENSEASG00005018383	YTHDC1	100	96.164	Equus_asinus_asinus
ENSODEG00000001715	YTHDC1	100	95.753	ENSECAG00000018303	YTHDC1	100	95.753	Equus_caballus
ENSODEG00000001715	YTHDC1	93	94.214	ENSEEUG00000015466	YTHDC1	93	92.582	Erinaceus_europaeus
ENSODEG00000001715	YTHDC1	93	62.482	ENSELUG00000014029	ythdc1	95	63.623	Esox_lucius
ENSODEG00000001715	YTHDC1	100	95.610	ENSFCAG00000026791	YTHDC1	100	95.610	Felis_catus
ENSODEG00000001715	YTHDC1	69	88.761	ENSFALG00000006581	YTHDC1	87	92.944	Ficedula_albicollis
ENSODEG00000001715	YTHDC1	99	98.462	ENSFDAG00000018560	YTHDC1	100	98.462	Fukomys_damarensis
ENSODEG00000001715	YTHDC1	65	65.455	ENSFHEG00000001286	ythdc1	60	56.024	Fundulus_heteroclitus
ENSODEG00000001715	YTHDC1	61	63.830	ENSGMOG00000018815	ythdc1	73	63.830	Gadus_morhua
ENSODEG00000001715	YTHDC1	92	85.736	ENSGALG00000035906	YTHDC1	88	83.685	Gallus_gallus
ENSODEG00000001715	YTHDC1	58	61.860	ENSGACG00000015486	ythdc1	57	61.951	Gasterosteus_aculeatus
ENSODEG00000001715	YTHDC1	92	86.756	ENSGAGG00000007108	YTHDC1	93	85.398	Gopherus_agassizii
ENSODEG00000001715	YTHDC1	100	97.042	ENSGGOG00000021958	YTHDC1	100	97.042	Gorilla_gorilla
ENSODEG00000001715	YTHDC1	57	60.092	ENSHBUG00000019288	ythdc1	93	56.491	Haplochromis_burtoni
ENSODEG00000001715	YTHDC1	100	98.584	ENSHGLG00000006319	-	100	98.584	Heterocephalus_glaber_female
ENSODEG00000001715	YTHDC1	94	72.834	ENSHGLG00000003239	-	86	73.494	Heterocephalus_glaber_female
ENSODEG00000001715	YTHDC1	94	71.345	ENSHGLG00100008060	-	86	71.964	Heterocephalus_glaber_male
ENSODEG00000001715	YTHDC1	100	97.665	ENSHGLG00100001556	-	100	97.665	Heterocephalus_glaber_male
ENSODEG00000001715	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSODEG00000001715	YTHDC1	93	67.836	ENSIPUG00000018136	ythdc1	92	67.784	Ictalurus_punctatus
ENSODEG00000001715	YTHDC1	100	95.924	ENSSTOG00000013652	YTHDC1	100	95.924	Ictidomys_tridecemlineatus
ENSODEG00000001715	YTHDC1	91	92.365	ENSJJAG00000010268	Ythdc1	93	92.216	Jaculus_jaculus
ENSODEG00000001715	YTHDC1	57	60.274	ENSKMAG00000006483	ythdc1	85	64.626	Kryptolebias_marmoratus
ENSODEG00000001715	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSODEG00000001715	YTHDC1	87	73.776	ENSLACG00000004893	YTHDC1	92	74.016	Latimeria_chalumnae
ENSODEG00000001715	YTHDC1	93	72.470	ENSLOCG00000003045	ythdc1	87	72.997	Lepisosteus_oculatus
ENSODEG00000001715	YTHDC1	100	95.492	ENSLAFG00000021592	YTHDC1	100	95.492	Loxodonta_africana
ENSODEG00000001715	YTHDC1	100	97.183	ENSMFAG00000031927	YTHDC1	100	97.183	Macaca_fascicularis
ENSODEG00000001715	YTHDC1	100	97.253	ENSMMUG00000002265	YTHDC1	100	97.253	Macaca_mulatta
ENSODEG00000001715	YTHDC1	100	97.253	ENSMNEG00000033751	YTHDC1	100	97.253	Macaca_nemestrina
ENSODEG00000001715	YTHDC1	100	97.115	ENSMLEG00000042147	YTHDC1	100	97.115	Mandrillus_leucophaeus
ENSODEG00000001715	YTHDC1	56	61.631	ENSMAMG00000013122	ythdc1	58	66.110	Mastacembelus_armatus
ENSODEG00000001715	YTHDC1	57	59.404	ENSMZEG00005023173	ythdc1	92	55.429	Maylandia_zebra
ENSODEG00000001715	YTHDC1	93	85.075	ENSMGAG00000010391	YTHDC1	92	86.567	Meleagris_gallopavo
ENSODEG00000001715	YTHDC1	93	92.217	ENSMAUG00000001286	Ythdc1	93	94.046	Mesocricetus_auratus
ENSODEG00000001715	YTHDC1	100	95.522	ENSMICG00000034640	YTHDC1	100	95.522	Microcebus_murinus
ENSODEG00000001715	YTHDC1	100	96.605	ENSMOCG00000020201	Ythdc1	100	96.605	Microtus_ochrogaster
ENSODEG00000001715	YTHDC1	87	69.021	ENSMODG00000014337	-	95	69.343	Monodelphis_domestica
ENSODEG00000001715	YTHDC1	93	90.284	ENSMODG00000020754	-	92	88.939	Monodelphis_domestica
ENSODEG00000001715	YTHDC1	96	50.714	ENSMODG00000010076	-	60	59.330	Monodelphis_domestica
ENSODEG00000001715	YTHDC1	65	57.021	ENSMODG00000009173	-	88	59.375	Monodelphis_domestica
ENSODEG00000001715	YTHDC1	50	66.846	ENSMALG00000013412	ythdc1	56	68.768	Monopterus_albus
ENSODEG00000001715	YTHDC1	93	94.362	MGP_CAROLIEiJ_G0027347	Ythdc1	97	91.225	Mus_caroli
ENSODEG00000001715	YTHDC1	93	93.630	ENSMUSG00000035851	Ythdc1	97	90.000	Mus_musculus
ENSODEG00000001715	YTHDC1	93	93.926	MGP_PahariEiJ_G0017126	Ythdc1	97	93.208	Mus_pahari
ENSODEG00000001715	YTHDC1	100	96.159	MGP_SPRETEiJ_G0028339	Ythdc1	100	96.159	Mus_spretus
ENSODEG00000001715	YTHDC1	93	73.412	ENSMPUG00000001743	YTHDC1	53	97.650	Mustela_putorius_furo
ENSODEG00000001715	YTHDC1	99	96.218	ENSMLUG00000016300	YTHDC1	100	96.218	Myotis_lucifugus
ENSODEG00000001715	YTHDC1	59	92.381	ENSNGAG00000024000	Ythdc1	93	91.449	Nannospalax_galili
ENSODEG00000001715	YTHDC1	57	60.187	ENSNBRG00000007663	ythdc1	70	65.888	Neolamprologus_brichardi
ENSODEG00000001715	YTHDC1	99	96.281	ENSNLEG00000009202	YTHDC1	99	96.281	Nomascus_leucogenys
ENSODEG00000001715	YTHDC1	82	80.936	ENSMEUG00000007128	YTHDC1	81	80.936	Notamacropus_eugenii
ENSODEG00000001715	YTHDC1	76	97.450	ENSOPRG00000008986	YTHDC1	74	97.450	Ochotona_princeps
ENSODEG00000001715	YTHDC1	92	50.439	ENSONIG00000012651	ythdc1	94	56.776	Oreochromis_niloticus
ENSODEG00000001715	YTHDC1	88	75.606	ENSOANG00000014398	YTHDC1	55	96.456	Ornithorhynchus_anatinus
ENSODEG00000001715	YTHDC1	93	81.509	ENSOCUG00000015886	YTHDC1	58	93.564	Oryctolagus_cuniculus
ENSODEG00000001715	YTHDC1	92	53.037	ENSORLG00000030544	ythdc1	60	66.024	Oryzias_latipes
ENSODEG00000001715	YTHDC1	92	52.897	ENSORLG00020019316	ythdc1	60	66.024	Oryzias_latipes_hni
ENSODEG00000001715	YTHDC1	56	61.275	ENSOMEG00000000551	ythdc1	94	54.627	Oryzias_melastigma
ENSODEG00000001715	YTHDC1	100	95.873	ENSOGAG00000003362	YTHDC1	100	95.873	Otolemur_garnettii
ENSODEG00000001715	YTHDC1	100	95.604	ENSOARG00000008633	YTHDC1	100	95.604	Ovis_aries
ENSODEG00000001715	YTHDC1	100	97.179	ENSPPAG00000041315	YTHDC1	100	97.179	Pan_paniscus
ENSODEG00000001715	YTHDC1	100	95.640	ENSPPRG00000011979	YTHDC1	100	95.640	Panthera_pardus
ENSODEG00000001715	YTHDC1	99	95.292	ENSPTIG00000015527	YTHDC1	100	95.461	Panthera_tigris_altaica
ENSODEG00000001715	YTHDC1	100	97.179	ENSPTRG00000016105	YTHDC1	100	97.179	Pan_troglodytes
ENSODEG00000001715	YTHDC1	100	97.042	ENSPANG00000021590	YTHDC1	100	97.042	Papio_anubis
ENSODEG00000001715	YTHDC1	93	69.648	ENSPKIG00000018497	ythdc1	93	69.298	Paramormyrops_kingsleyae
ENSODEG00000001715	YTHDC1	91	86.536	ENSPSIG00000002782	YTHDC1	92	86.687	Pelodiscus_sinensis
ENSODEG00000001715	YTHDC1	55	56.364	ENSPMGG00000000970	-	72	64.460	Periophthalmus_magnuspinnatus
ENSODEG00000001715	YTHDC1	99	96.374	ENSPEMG00000013850	Ythdc1	100	96.374	Peromyscus_maniculatus_bairdii
ENSODEG00000001715	YTHDC1	93	90.284	ENSPCIG00000006870	YTHDC1	92	88.939	Phascolarctos_cinereus
ENSODEG00000001715	YTHDC1	57	59.318	ENSPFOG00000013404	ythdc1	60	64.183	Poecilia_formosa
ENSODEG00000001715	YTHDC1	57	59.318	ENSPLAG00000011079	ythdc1	85	64.183	Poecilia_latipinna
ENSODEG00000001715	YTHDC1	57	59.318	ENSPMEG00000009238	ythdc1	60	64.183	Poecilia_mexicana
ENSODEG00000001715	YTHDC1	66	71.429	ENSPREG00000016973	ythdc1	59	59.698	Poecilia_reticulata
ENSODEG00000001715	YTHDC1	87	97.152	ENSPPYG00000014726	YTHDC1	100	97.152	Pongo_abelii
ENSODEG00000001715	YTHDC1	77	89.349	ENSPCAG00000009607	YTHDC1	77	87.574	Procavia_capensis
ENSODEG00000001715	YTHDC1	100	91.842	ENSPCOG00000019105	YTHDC1	100	91.842	Propithecus_coquereli
ENSODEG00000001715	YTHDC1	93	92.467	ENSPVAG00000015551	YTHDC1	93	91.581	Pteropus_vampyrus
ENSODEG00000001715	YTHDC1	57	59.404	ENSPNYG00000011687	ythdc1	92	55.429	Pundamilia_nyererei
ENSODEG00000001715	YTHDC1	93	69.635	ENSPNAG00000028365	ythdc1	93	69.287	Pygocentrus_nattereri
ENSODEG00000001715	YTHDC1	93	91.387	ENSRNOG00000001996	Ythdc1	93	92.701	Rattus_norvegicus
ENSODEG00000001715	YTHDC1	99	94.911	ENSRBIG00000028279	YTHDC1	99	94.911	Rhinopithecus_bieti
ENSODEG00000001715	YTHDC1	100	97.253	ENSRROG00000035028	YTHDC1	100	97.253	Rhinopithecus_roxellana
ENSODEG00000001715	YTHDC1	100	97.183	ENSSBOG00000022353	YTHDC1	100	97.183	Saimiri_boliviensis_boliviensis
ENSODEG00000001715	YTHDC1	93	89.088	ENSSHAG00000002538	YTHDC1	91	88.636	Sarcophilus_harrisii
ENSODEG00000001715	YTHDC1	93	68.467	ENSSFOG00015003298	ythdc1	60	85.071	Scleropages_formosus
ENSODEG00000001715	YTHDC1	57	59.071	ENSSMAG00000009086	ythdc1	94	54.455	Scophthalmus_maximus
ENSODEG00000001715	YTHDC1	56	60.775	ENSSDUG00000022008	ythdc1	94	57.265	Seriola_dumerili
ENSODEG00000001715	YTHDC1	56	60.775	ENSSLDG00000007926	ythdc1	94	57.265	Seriola_lalandi_dorsalis
ENSODEG00000001715	YTHDC1	79	96.534	ENSSARG00000010960	YTHDC1	100	96.534	Sorex_araneus
ENSODEG00000001715	YTHDC1	93	82.467	ENSSPUG00000009357	YTHDC1	94	83.717	Sphenodon_punctatus
ENSODEG00000001715	YTHDC1	57	61.927	ENSSPAG00000011449	ythdc1	59	66.986	Stegastes_partitus
ENSODEG00000001715	YTHDC1	100	93.919	ENSSSCG00000035505	YTHDC1	100	94.630	Sus_scrofa
ENSODEG00000001715	YTHDC1	93	85.672	ENSTGUG00000004452	-	92	85.821	Taeniopygia_guttata
ENSODEG00000001715	YTHDC1	63	65.854	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSODEG00000001715	YTHDC1	89	60.738	ENSTNIG00000013243	ythdc1	89	65.268	Tetraodon_nigroviridis
ENSODEG00000001715	YTHDC1	93	87.294	ENSTBEG00000011546	YTHDC1	92	87.294	Tupaia_belangeri
ENSODEG00000001715	YTHDC1	93	94.231	ENSTTRG00000005083	YTHDC1	93	94.527	Tursiops_truncatus
ENSODEG00000001715	YTHDC1	93	95.575	ENSUAMG00000010388	YTHDC1	100	95.575	Ursus_americanus
ENSODEG00000001715	YTHDC1	99	83.613	ENSUMAG00000013668	YTHDC1	98	83.613	Ursus_maritimus
ENSODEG00000001715	YTHDC1	100	96.322	ENSVPAG00000009040	YTHDC1	100	96.322	Vicugna_pacos
ENSODEG00000001715	YTHDC1	99	95.492	ENSVVUG00000005387	YTHDC1	100	95.434	Vulpes_vulpes
ENSODEG00000001715	YTHDC1	92	74.290	ENSXETG00000017960	ythdc1	91	73.842	Xenopus_tropicalis
ENSODEG00000001715	YTHDC1	57	59.318	ENSXMAG00000005196	ythdc1	61	64.220	Xiphophorus_maculatus