EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001772 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 11748 bases
Position: chrJH651748.1:2628747-2640494
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000002273	RRM_1	PF00076.22	4.4e-10	1	1
ENSODEP00000002272	RRM_1	PF00076.22	6.8e-10	1	1
ENSODEP00000002271	RRM_1	PF00076.22	7.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000002327	-	456	-	ENSODEP00000002274	151 (aa)	-	-
ENSODET00000002326	-	1224	-	ENSODEP00000002273	407 (aa)	-	-
ENSODET00000002325	-	1488	-	ENSODEP00000002272	495 (aa)	-	-
ENSODET00000002324	-	1542	-	ENSODEP00000002271	513 (aa)	-	-

Gene Model

Click here to download ENSODEG00000001772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001772	-	100	67.615	ENSODEG00000004747	-	96	72.430
ENSODEG00000001772	-	99	77.803	ENSODEG00000012915	-	95	79.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001772	-	100	76.392	ENSG00000270647	TAF15	98	79.747	Homo_sapiens
ENSODEG00000001772	-	74	83.979	ENSAMEG00000014860	TAF15	75	79.859	Ailuropoda_melanoleuca
ENSODEG00000001772	-	67	70.526	ENSAPLG00000006217	TAF15	89	64.471	Anas_platyrhynchos
ENSODEG00000001772	-	72	84.319	ENSANAG00000020904	TAF15	70	82.005	Aotus_nancymaae
ENSODEG00000001772	-	100	76.615	ENSCJAG00000014961	TAF15	95	79.720	Callithrix_jacchus
ENSODEG00000001772	-	74	85.052	ENSCAFG00000018176	TAF15	75	80.607	Canis_familiaris
ENSODEG00000001772	-	77	84.487	ENSCAFG00020004027	TAF15	77	80.607	Canis_lupus_dingo
ENSODEG00000001772	-	69	84.122	ENSCHIG00000019985	-	72	87.273	Capra_hircus
ENSODEG00000001772	-	74	85.052	ENSTSYG00000003930	TAF15	68	85.496	Carlito_syrichta
ENSODEG00000001772	-	97	73.944	ENSCAPG00000002530	-	95	74.429	Cavia_aperea
ENSODEG00000001772	-	97	73.474	ENSCPOG00000010259	-	94	73.973	Cavia_porcellus
ENSODEG00000001772	-	100	69.977	ENSCCAG00000036025	TAF15	95	73.522	Cebus_capucinus
ENSODEG00000001772	-	100	76.837	ENSCATG00000044848	TAF15	95	79.953	Cercocebus_atys
ENSODEG00000001772	-	72	85.333	ENSCLAG00000008940	TAF15	67	85.600	Chinchilla_lanigera
ENSODEG00000001772	-	72	85.090	ENSCSAG00000006241	TAF15	66	85.347	Chlorocebus_sabaeus
ENSODEG00000001772	-	72	81.600	ENSCHOG00000002729	TAF15	60	82.133	Choloepus_hoffmanni
ENSODEG00000001772	-	73	67.609	ENSCPBG00000027820	TAF15	88	68.274	Chrysemys_picta_bellii
ENSODEG00000001772	-	100	70.023	ENSCANG00000038846	-	94	74.939	Colobus_angolensis_palliatus
ENSODEG00000001772	-	69	81.457	ENSCANG00000042639	-	78	84.698	Colobus_angolensis_palliatus
ENSODEG00000001772	-	74	78.351	ENSCGRG00001012011	Taf15	78	75.202	Cricetulus_griseus_chok1gshd
ENSODEG00000001772	-	74	84.536	ENSCGRG00000005110	Taf15	69	84.794	Cricetulus_griseus_crigri
ENSODEG00000001772	-	74	85.309	ENSDNOG00000006956	TAF15	81	83.372	Dasypus_novemcinctus
ENSODEG00000001772	-	72	80.366	ENSDORG00000014619	Taf15	67	78.534	Dipodomys_ordii
ENSODEG00000001772	-	68	82.402	ENSETEG00000001337	TAF15	64	82.961	Echinops_telfairi
ENSODEG00000001772	-	100	74.610	ENSEASG00005011235	TAF15	95	75.058	Equus_asinus_asinus
ENSODEG00000001772	-	74	85.825	ENSECAG00000000718	TAF15	72	80.139	Equus_caballus
ENSODEG00000001772	-	100	75.278	ENSFCAG00000018167	TAF15	95	76.636	Felis_catus
ENSODEG00000001772	-	73	66.923	ENSFALG00000009696	TAF15	89	69.697	Ficedula_albicollis
ENSODEG00000001772	-	74	85.013	ENSFDAG00000008577	TAF15	51	87.857	Fukomys_damarensis
ENSODEG00000001772	-	66	71.174	ENSGALG00000002060	TAF15	89	64.941	Gallus_gallus
ENSODEG00000001772	-	100	76.615	ENSGGOG00000005693	TAF15	95	79.720	Gorilla_gorilla
ENSODEG00000001772	-	96	57.635	ENSHGLG00000002551	-	94	60.050	Heterocephalus_glaber_female
ENSODEG00000001772	-	74	85.309	ENSHGLG00000005292	-	70	85.825	Heterocephalus_glaber_female
ENSODEG00000001772	-	99	58.173	ENSHGLG00100002825	-	95	60.539	Heterocephalus_glaber_male
ENSODEG00000001772	-	72	84.921	ENSHGLG00100013953	-	69	77.525	Heterocephalus_glaber_male
ENSODEG00000001772	-	74	85.567	ENSSTOG00000002081	TAF15	76	81.448	Ictidomys_tridecemlineatus
ENSODEG00000001772	-	74	81.959	ENSJJAG00000010606	Taf15	66	84.824	Jaculus_jaculus
ENSODEG00000001772	-	71	54.408	ENSLACG00000018479	-	89	51.449	Latimeria_chalumnae
ENSODEG00000001772	-	74	84.021	ENSLAFG00000018332	TAF15	66	83.763	Loxodonta_africana
ENSODEG00000001772	-	74	84.833	ENSMFAG00000041941	TAF15	76	80.587	Macaca_fascicularis
ENSODEG00000001772	-	74	84.833	ENSMMUG00000047780	TAF15	76	80.587	Macaca_mulatta
ENSODEG00000001772	-	84	80.969	ENSMMUG00000047590	-	84	65.743	Macaca_mulatta
ENSODEG00000001772	-	100	76.837	ENSMNEG00000044227	TAF15	95	79.953	Macaca_nemestrina
ENSODEG00000001772	-	100	76.837	ENSMLEG00000028534	TAF15	95	79.953	Mandrillus_leucophaeus
ENSODEG00000001772	-	66	70.175	ENSMGAG00000003842	TAF15	84	64.120	Meleagris_gallopavo
ENSODEG00000001772	-	74	84.536	ENSMICG00000017057	TAF15	67	84.794	Microcebus_murinus
ENSODEG00000001772	-	74	84.062	ENSMOCG00000015121	Taf15	69	84.319	Microtus_ochrogaster
ENSODEG00000001772	-	74	81.491	ENSMODG00000019123	TAF15	87	82.005	Monodelphis_domestica
ENSODEG00000001772	-	74	84.536	MGP_CAROLIEiJ_G0016876	Taf15	66	84.794	Mus_caroli
ENSODEG00000001772	-	74	84.794	ENSMUSG00000020680	Taf15	69	85.052	Mus_musculus
ENSODEG00000001772	-	74	85.052	MGP_PahariEiJ_G0018007	Taf15	68	85.309	Mus_pahari
ENSODEG00000001772	-	74	84.794	MGP_SPRETEiJ_G0017720	Taf15	67	85.052	Mus_spretus
ENSODEG00000001772	-	72	84.492	ENSMPUG00000014948	TAF15	85	85.294	Mustela_putorius_furo
ENSODEG00000001772	-	74	85.052	ENSMLUG00000002870	TAF15	75	85.309	Myotis_lucifugus
ENSODEG00000001772	-	69	84.768	ENSNGAG00000017633	-	66	79.897	Nannospalax_galili
ENSODEG00000001772	-	98	65.977	ENSNGAG00000019473	-	96	65.574	Nannospalax_galili
ENSODEG00000001772	-	100	77.333	ENSNLEG00000014063	TAF15	95	79.021	Nomascus_leucogenys
ENSODEG00000001772	-	63	82.819	ENSMEUG00000006009	-	54	84.581	Notamacropus_eugenii
ENSODEG00000001772	-	74	65.198	ENSOANG00000014273	TAF15	80	66.822	Ornithorhynchus_anatinus
ENSODEG00000001772	-	74	86.340	ENSOCUG00000002838	TAF15	66	86.598	Oryctolagus_cuniculus
ENSODEG00000001772	-	74	83.805	ENSOGAG00000011719	TAF15	67	84.062	Otolemur_garnettii
ENSODEG00000001772	-	83	79.446	ENSOARG00000005512	-	86	85.271	Ovis_aries
ENSODEG00000001772	-	82	76.056	ENSOARG00000000081	-	75	83.505	Ovis_aries
ENSODEG00000001772	-	100	76.392	ENSPPAG00000043510	-	95	79.487	Pan_paniscus
ENSODEG00000001772	-	74	86.340	ENSPPRG00000003286	TAF15	67	86.598	Panthera_pardus
ENSODEG00000001772	-	100	73.904	ENSPTIG00000016445	TAF15	95	79.206	Panthera_tigris_altaica
ENSODEG00000001772	-	100	76.392	ENSPTRG00000009026	TAF15	95	79.487	Pan_troglodytes
ENSODEG00000001772	-	100	76.837	ENSPANG00000022930	TAF15	95	79.953	Papio_anubis
ENSODEG00000001772	-	73	65.075	ENSPSIG00000014222	TAF15	89	65.594	Pelodiscus_sinensis
ENSODEG00000001772	-	74	81.959	ENSPEMG00000018715	Taf15	66	82.216	Peromyscus_maniculatus_bairdii
ENSODEG00000001772	-	74	82.776	ENSPCIG00000003783	TAF15	70	83.290	Phascolarctos_cinereus
ENSODEG00000001772	-	72	83.548	ENSPPYG00000008194	TAF15	62	83.805	Pongo_abelii
ENSODEG00000001772	-	73	75.521	ENSPCAG00000009582	TAF15	68	72.577	Procavia_capensis
ENSODEG00000001772	-	74	84.536	ENSPCOG00000007032	TAF15	76	80.543	Propithecus_coquereli
ENSODEG00000001772	-	56	87.931	ENSPVAG00000003952	TAF15	59	89.773	Pteropus_vampyrus
ENSODEG00000001772	-	74	85.271	ENSRNOG00000058393	Taf15	69	85.567	Rattus_norvegicus
ENSODEG00000001772	-	74	85.271	ENSRNOG00000054871	LOC103694865	69	85.825	Rattus_norvegicus
ENSODEG00000001772	-	100	76.615	ENSRBIG00000043192	TAF15	95	79.720	Rhinopithecus_bieti
ENSODEG00000001772	-	100	76.615	ENSRROG00000029426	TAF15	95	79.720	Rhinopithecus_roxellana
ENSODEG00000001772	-	100	70.905	ENSSBOG00000019731	-	81	91.429	Saimiri_boliviensis_boliviensis
ENSODEG00000001772	-	87	65.591	ENSSBOG00000032185	-	84	75.725	Saimiri_boliviensis_boliviensis
ENSODEG00000001772	-	74	83.290	ENSSHAG00000003105	TAF15	85	75.581	Sarcophilus_harrisii
ENSODEG00000001772	-	93	74.269	ENSSARG00000012092	TAF15	68	85.309	Sorex_araneus
ENSODEG00000001772	-	66	68.056	ENSSPUG00000006042	TAF15	89	58.851	Sphenodon_punctatus
ENSODEG00000001772	-	74	85.052	ENSSSCG00000017707	TAF15	65	85.347	Sus_scrofa
ENSODEG00000001772	-	74	65.649	ENSTGUG00000004702	TAF15	92	69.797	Taeniopygia_guttata
ENSODEG00000001772	-	74	84.278	ENSTTRG00000014145	TAF15	70	84.794	Tursiops_truncatus
ENSODEG00000001772	-	71	82.086	ENSUAMG00000004942	TAF15	74	82.713	Ursus_americanus
ENSODEG00000001772	-	74	85.309	ENSUMAG00000016876	TAF15	76	81.075	Ursus_maritimus
ENSODEG00000001772	-	61	83.072	ENSVPAG00000001667	TAF15	52	83.072	Vicugna_pacos
ENSODEG00000001772	-	77	84.487	ENSVVUG00000020375	TAF15	77	80.607	Vulpes_vulpes
ENSODEG00000001772	-	65	51.195	ENSXETG00000013477	taf15	90	44.789	Xenopus_tropicalis