EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000001792 (Gene tree)
Gene ID: 101566544
Gene Symbol: PATL1
Alias: -
Full Name: PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 26595 bases
Position: chrJH651798.1:400744-427338
Accession: 101566544
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000002304	PAT1	PF09770.9	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000002357	PATL1-201	1707	XM_004646924	ENSODEP00000002304	568 (aa)	-	-

Gene Model

Click here to download ENSODEG00000001792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001792	PATL1	94	91.608	ENSG00000166889	PATL1	73	90.032	Homo_sapiens
ENSODEG00000001792	PATL1	70	52.469	ENSAPOG00000021290	patl1	72	45.122	Acanthochromis_polyacanthus
ENSODEG00000001792	PATL1	99	91.235	ENSAMEG00000014215	PATL1	73	91.235	Ailuropoda_melanoleuca
ENSODEG00000001792	PATL1	70	51.553	ENSACIG00000005182	patl1	57	46.411	Amphilophus_citrinellus
ENSODEG00000001792	PATL1	83	46.531	ENSAOCG00000021993	patl1	71	46.531	Amphiprion_ocellaris
ENSODEG00000001792	PATL1	70	52.469	ENSAPEG00000021391	patl1	51	47.196	Amphiprion_percula
ENSODEG00000001792	PATL1	79	45.122	ENSATEG00000002230	patl1	51	46.117	Anabas_testudineus
ENSODEG00000001792	PATL1	60	83.234	ENSAPLG00000013394	PATL1	61	84.146	Anas_platyrhynchos
ENSODEG00000001792	PATL1	99	75.000	ENSACAG00000006607	PATL1	70	76.655	Anolis_carolinensis
ENSODEG00000001792	PATL1	94	91.259	ENSANAG00000023078	PATL1	73	90.837	Aotus_nancymaae
ENSODEG00000001792	PATL1	85	43.725	ENSAMXG00000010731	patl1	72	43.725	Astyanax_mexicanus
ENSODEG00000001792	PATL1	95	92.014	ENSBTAG00000005913	PATL1	73	89.423	Bos_taurus
ENSODEG00000001792	PATL1	94	91.259	ENSCJAG00000016192	PATL1	73	90.438	Callithrix_jacchus
ENSODEG00000001792	PATL1	99	92.032	ENSCAFG00000007581	PATL1	73	92.032	Canis_familiaris
ENSODEG00000001792	PATL1	99	92.032	ENSCAFG00020001648	PATL1	73	91.837	Canis_lupus_dingo
ENSODEG00000001792	PATL1	94	91.608	ENSCHIG00000025913	PATL1	73	88.782	Capra_hircus
ENSODEG00000001792	PATL1	98	89.516	ENSTSYG00000012748	PATL1	70	89.516	Carlito_syrichta
ENSODEG00000001792	PATL1	95	94.024	ENSCAPG00000013668	PATL1	73	94.024	Cavia_aperea
ENSODEG00000001792	PATL1	95	94.821	ENSCPOG00000006827	PATL1	71	94.821	Cavia_porcellus
ENSODEG00000001792	PATL1	94	91.608	ENSCCAG00000023759	PATL1	73	91.235	Cebus_capucinus
ENSODEG00000001792	PATL1	94	91.608	ENSCATG00000009629	PATL1	73	90.837	Cercocebus_atys
ENSODEG00000001792	PATL1	94	94.024	ENSCLAG00000003427	PATL1	73	94.024	Chinchilla_lanigera
ENSODEG00000001792	PATL1	87	95.082	ENSCSAG00000006095	PATL1	75	92.937	Chlorocebus_sabaeus
ENSODEG00000001792	PATL1	62	92.929	ENSCHOG00000001611	PATL1	56	92.929	Choloepus_hoffmanni
ENSODEG00000001792	PATL1	94	91.608	ENSCANG00000039197	PATL1	73	90.837	Colobus_angolensis_palliatus
ENSODEG00000001792	PATL1	95	90.941	ENSCGRG00001024927	Patl1	73	90.438	Cricetulus_griseus_chok1gshd
ENSODEG00000001792	PATL1	95	90.941	ENSCGRG00000000461	Patl1	73	90.438	Cricetulus_griseus_crigri
ENSODEG00000001792	PATL1	70	52.564	ENSCSEG00000008261	patl1	55	48.066	Cynoglossus_semilaevis
ENSODEG00000001792	PATL1	76	50.785	ENSCVAG00000006664	patl1	61	47.699	Cyprinodon_variegatus
ENSODEG00000001792	PATL1	96	44.939	ENSDARG00000017423	patl1	73	45.082	Danio_rerio
ENSODEG00000001792	PATL1	99	88.845	ENSDNOG00000038865	PATL1	67	88.845	Dasypus_novemcinctus
ENSODEG00000001792	PATL1	95	90.592	ENSDORG00000000237	Patl1	73	90.040	Dipodomys_ordii
ENSODEG00000001792	PATL1	95	90.625	ENSEASG00005007963	PATL1	73	88.845	Equus_asinus_asinus
ENSODEG00000001792	PATL1	95	90.625	ENSECAG00000011411	PATL1	73	88.845	Equus_caballus
ENSODEG00000001792	PATL1	85	45.122	ENSELUG00000024249	patl1	73	45.122	Esox_lucius
ENSODEG00000001792	PATL1	99	92.032	ENSFCAG00000015573	PATL1	73	92.032	Felis_catus
ENSODEG00000001792	PATL1	99	80.478	ENSFALG00000012150	PATL1	73	80.080	Ficedula_albicollis
ENSODEG00000001792	PATL1	99	91.633	ENSFDAG00000016128	PATL1	73	91.633	Fukomys_damarensis
ENSODEG00000001792	PATL1	70	52.469	ENSFHEG00000017790	patl1	52	47.755	Fundulus_heteroclitus
ENSODEG00000001792	PATL1	94	77.551	ENSGALG00000042641	PATL1	70	77.551	Gallus_gallus
ENSODEG00000001792	PATL1	70	54.037	ENSGAFG00000006508	patl1	53	47.418	Gambusia_affinis
ENSODEG00000001792	PATL1	90	45.200	ENSGACG00000016448	patl1	71	45.200	Gasterosteus_aculeatus
ENSODEG00000001792	PATL1	99	83.267	ENSGAGG00000004461	PATL1	71	83.267	Gopherus_agassizii
ENSODEG00000001792	PATL1	94	91.608	ENSGGOG00000004335	PATL1	73	90.032	Gorilla_gorilla
ENSODEG00000001792	PATL1	99	90.837	ENSHGLG00000018173	PATL1	73	90.837	Heterocephalus_glaber_female
ENSODEG00000001792	PATL1	99	90.837	ENSHGLG00100003453	PATL1	73	90.837	Heterocephalus_glaber_male
ENSODEG00000001792	PATL1	70	54.777	ENSHCOG00000001898	patl1	53	48.804	Hippocampus_comes
ENSODEG00000001792	PATL1	95	91.633	ENSSTOG00000013764	PATL1	74	91.633	Ictidomys_tridecemlineatus
ENSODEG00000001792	PATL1	95	90.278	ENSJJAG00000010135	Patl1	74	89.641	Jaculus_jaculus
ENSODEG00000001792	PATL1	71	51.534	ENSKMAG00000020848	patl1	52	46.614	Kryptolebias_marmoratus
ENSODEG00000001792	PATL1	70	52.174	ENSLBEG00000023617	patl1	50	46.009	Labrus_bergylta
ENSODEG00000001792	PATL1	96	58.800	ENSLACG00000004640	PATL1	70	58.400	Latimeria_chalumnae
ENSODEG00000001792	PATL1	88	46.748	ENSLOCG00000000717	patl1	73	46.341	Lepisosteus_oculatus
ENSODEG00000001792	PATL1	95	90.837	ENSLAFG00000015161	PATL1	73	88.845	Loxodonta_africana
ENSODEG00000001792	PATL1	94	91.608	ENSMFAG00000040851	PATL1	73	90.837	Macaca_fascicularis
ENSODEG00000001792	PATL1	94	91.608	ENSMMUG00000017287	PATL1	73	90.837	Macaca_mulatta
ENSODEG00000001792	PATL1	94	91.608	ENSMNEG00000038692	PATL1	73	90.837	Macaca_nemestrina
ENSODEG00000001792	PATL1	94	91.608	ENSMLEG00000030044	PATL1	73	90.837	Mandrillus_leucophaeus
ENSODEG00000001792	PATL1	85	47.755	ENSMAMG00000003950	patl1	71	47.755	Mastacembelus_armatus
ENSODEG00000001792	PATL1	89	78.462	ENSMGAG00000003406	PATL1	68	78.462	Meleagris_gallopavo
ENSODEG00000001792	PATL1	97	91.667	ENSMAUG00000012059	Patl1	82	91.667	Mesocricetus_auratus
ENSODEG00000001792	PATL1	94	91.608	ENSMICG00000004172	PATL1	66	97.345	Microcebus_murinus
ENSODEG00000001792	PATL1	95	91.319	ENSMOCG00000010087	Patl1	73	90.040	Microtus_ochrogaster
ENSODEG00000001792	PATL1	99	43.952	ENSMMOG00000013711	patl1	69	43.952	Mola_mola
ENSODEG00000001792	PATL1	99	85.657	ENSMODG00000020201	PATL1	73	85.657	Monodelphis_domestica
ENSODEG00000001792	PATL1	82	46.341	ENSMALG00000018706	patl1	79	46.341	Monopterus_albus
ENSODEG00000001792	PATL1	95	90.438	MGP_CAROLIEiJ_G0022739	Patl1	73	90.438	Mus_caroli
ENSODEG00000001792	PATL1	95	90.592	ENSMUSG00000046139	Patl1	73	90.438	Mus_musculus
ENSODEG00000001792	PATL1	95	90.438	MGP_PahariEiJ_G0014233	Patl1	73	90.438	Mus_pahari
ENSODEG00000001792	PATL1	95	90.592	MGP_SPRETEiJ_G0023652	Patl1	73	90.438	Mus_spretus
ENSODEG00000001792	PATL1	99	92.032	ENSMPUG00000014607	PATL1	73	92.032	Mustela_putorius_furo
ENSODEG00000001792	PATL1	95	89.641	ENSMLUG00000011169	PATL1	69	89.641	Myotis_lucifugus
ENSODEG00000001792	PATL1	99	90.438	ENSNGAG00000003682	Patl1	73	90.438	Nannospalax_galili
ENSODEG00000001792	PATL1	51	58.594	ENSNBRG00000015372	patl1	69	43.293	Neolamprologus_brichardi
ENSODEG00000001792	PATL1	93	90.204	ENSNLEG00000013081	PATL1	72	90.204	Nomascus_leucogenys
ENSODEG00000001792	PATL1	71	89.032	ENSMEUG00000009391	PATL1	62	89.032	Notamacropus_eugenii
ENSODEG00000001792	PATL1	66	94.444	ENSOPRG00000007963	PATL1	58	94.444	Ochotona_princeps
ENSODEG00000001792	PATL1	68	56.250	ENSONIG00000004170	patl1	72	45.306	Oreochromis_niloticus
ENSODEG00000001792	PATL1	95	91.319	ENSOCUG00000002156	PATL1	73	90.837	Oryctolagus_cuniculus
ENSODEG00000001792	PATL1	69	52.866	ENSORLG00015022240	patl1	55	46.154	Oryzias_latipes_hsok
ENSODEG00000001792	PATL1	94	91.608	ENSOGAG00000004351	PATL1	73	90.438	Otolemur_garnettii
ENSODEG00000001792	PATL1	94	91.608	ENSOARG00000012005	PATL1	70	89.103	Ovis_aries
ENSODEG00000001792	PATL1	94	91.608	ENSPPAG00000034275	PATL1	73	90.040	Pan_paniscus
ENSODEG00000001792	PATL1	99	92.430	ENSPPRG00000020639	PATL1	73	92.430	Panthera_pardus
ENSODEG00000001792	PATL1	99	92.430	ENSPTIG00000019298	PATL1	73	92.430	Panthera_tigris_altaica
ENSODEG00000001792	PATL1	95	90.040	ENSPTRG00000003697	PATL1	74	89.796	Pan_troglodytes
ENSODEG00000001792	PATL1	94	91.608	ENSPANG00000035620	PATL1	73	90.837	Papio_anubis
ENSODEG00000001792	PATL1	84	45.935	ENSPKIG00000016224	patl1	73	45.935	Paramormyrops_kingsleyae
ENSODEG00000001792	PATL1	99	82.470	ENSPSIG00000016206	PATL1	66	82.470	Pelodiscus_sinensis
ENSODEG00000001792	PATL1	85	46.748	ENSPMGG00000002644	patl1	72	46.748	Periophthalmus_magnuspinnatus
ENSODEG00000001792	PATL1	95	91.319	ENSPEMG00000014215	Patl1	73	90.040	Peromyscus_maniculatus_bairdii
ENSODEG00000001792	PATL1	99	87.251	ENSPCIG00000010852	PATL1	73	87.251	Phascolarctos_cinereus
ENSODEG00000001792	PATL1	85	45.817	ENSPFOG00000007768	patl1	73	45.817	Poecilia_formosa
ENSODEG00000001792	PATL1	70	54.037	ENSPLAG00000018465	patl1	53	48.325	Poecilia_latipinna
ENSODEG00000001792	PATL1	70	54.037	ENSPMEG00000006555	patl1	53	47.418	Poecilia_mexicana
ENSODEG00000001792	PATL1	94	91.608	ENSPPYG00000003230	PATL1	73	90.837	Pongo_abelii
ENSODEG00000001792	PATL1	94	91.633	ENSPCOG00000020770	PATL1	73	91.633	Propithecus_coquereli
ENSODEG00000001792	PATL1	84	89.243	ENSPVAG00000015239	PATL1	75	90.000	Pteropus_vampyrus
ENSODEG00000001792	PATL1	85	45.528	ENSPNYG00000018936	patl1	80	45.528	Pundamilia_nyererei
ENSODEG00000001792	PATL1	88	43.902	ENSPNAG00000017907	patl1	73	43.902	Pygocentrus_nattereri
ENSODEG00000001792	PATL1	95	91.289	ENSRNOG00000021052	Patl1	73	90.354	Rattus_norvegicus
ENSODEG00000001792	PATL1	94	91.259	ENSRBIG00000032263	PATL1	72	91.235	Rhinopithecus_bieti
ENSODEG00000001792	PATL1	94	91.259	ENSRROG00000032861	PATL1	73	91.235	Rhinopithecus_roxellana
ENSODEG00000001792	PATL1	94	91.259	ENSSBOG00000025195	PATL1	73	90.837	Saimiri_boliviensis_boliviensis
ENSODEG00000001792	PATL1	99	86.056	ENSSHAG00000004309	PATL1	73	86.056	Sarcophilus_harrisii
ENSODEG00000001792	PATL1	85	43.902	ENSSFOG00015009614	patl1	73	43.902	Scleropages_formosus
ENSODEG00000001792	PATL1	70	52.174	ENSSMAG00000009482	patl1	50	46.479	Scophthalmus_maximus
ENSODEG00000001792	PATL1	77	91.566	ENSSARG00000009600	PATL1	57	91.566	Sorex_araneus
ENSODEG00000001792	PATL1	99	79.681	ENSSPUG00000009453	PATL1	73	79.681	Sphenodon_punctatus
ENSODEG00000001792	PATL1	70	52.469	ENSSPAG00000003187	patl1	66	44.715	Stegastes_partitus
ENSODEG00000001792	PATL1	94	91.259	ENSSSCG00000013124	PATL1	74	90.837	Sus_scrofa
ENSODEG00000001792	PATL1	99	80.478	ENSTGUG00000006222	PATL1	73	79.681	Taeniopygia_guttata
ENSODEG00000001792	PATL1	85	42.105	ENSTRUG00000000709	patl1	72	42.105	Takifugu_rubripes
ENSODEG00000001792	PATL1	99	87.781	ENSTBEG00000000796	PATL1	74	87.781	Tupaia_belangeri
ENSODEG00000001792	PATL1	71	91.667	ENSTTRG00000009389	PATL1	62	91.667	Tursiops_truncatus
ENSODEG00000001792	PATL1	98	91.837	ENSUMAG00000018634	PATL1	75	92.032	Ursus_maritimus
ENSODEG00000001792	PATL1	69	97.959	ENSVPAG00000009224	PATL1	63	90.837	Vicugna_pacos
ENSODEG00000001792	PATL1	99	92.032	ENSVVUG00000016668	PATL1	75	92.032	Vulpes_vulpes
ENSODEG00000001792	PATL1	70	53.459	ENSXMAG00000013834	patl1	52	46.919	Xiphophorus_maculatus