EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001826 (Gene tree)
Gene ID: 101572922
Gene Symbol: -
Alias: -
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 15893 bases
Position: chrJH651784.1:263812-279704
Accession: 101572922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000002346	RRM_1	PF00076.22	1.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000002399	-	1407	XM_004646544	ENSODEP00000002346	468 (aa)	XP_004646601	UPI000333987F

Gene Model

Click here to download ENSODEG00000001826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001826's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001826	-	53	63.291	ENSODEG00000004517	HNRNPH3	75	41.379
ENSODEG00000001826	-	71	39.835	ENSODEG00000002359	-	88	39.835
ENSODEG00000001826	-	77	85.042	ENSODEG00000004897	-	100	85.042
ENSODEG00000001826	-	66	37.003	ENSODEG00000007170	-	85	35.475
ENSODEG00000001826	-	73	84.795	ENSODEG00000010775	-	100	84.795
ENSODEG00000001826	-	71	50.000	ENSODEG00000007058	-	85	39.578
ENSODEG00000001826	-	71	42.234	ENSODEG00000001195	-	80	41.436
ENSODEG00000001826	-	71	43.421	ENSODEG00000019266	-	94	43.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001826	-	100	84.583	ENSG00000132463	GRSF1	100	88.994	Homo_sapiens
ENSODEG00000001826	-	77	88.950	ENSAMEG00000005896	GRSF1	100	88.950	Ailuropoda_melanoleuca
ENSODEG00000001826	-	99	59.494	ENSACAG00000012921	GRSF1	91	58.244	Anolis_carolinensis
ENSODEG00000001826	-	100	84.760	ENSANAG00000022114	GRSF1	97	89.935	Aotus_nancymaae
ENSODEG00000001826	-	100	86.279	ENSBTAG00000008577	GRSF1	99	90.028	Bos_taurus
ENSODEG00000001826	-	100	84.551	ENSCJAG00000014477	GRSF1	99	89.935	Callithrix_jacchus
ENSODEG00000001826	-	71	90.036	ENSCAFG00000002922	GRSF1	100	90.036	Canis_familiaris
ENSODEG00000001826	-	100	84.886	ENSCAFG00020027060	GRSF1	100	84.472	Canis_lupus_dingo
ENSODEG00000001826	-	100	86.042	ENSCHIG00000021580	GRSF1	100	84.792	Capra_hircus
ENSODEG00000001826	-	81	87.335	ENSTSYG00000008487	-	100	90.252	Carlito_syrichta
ENSODEG00000001826	-	99	62.313	ENSTSYG00000028860	-	99	73.889	Carlito_syrichta
ENSODEG00000001826	-	71	89.935	ENSCAPG00000000156	GRSF1	100	89.935	Cavia_aperea
ENSODEG00000001826	-	100	86.017	ENSCPOG00000011662	GRSF1	100	90.028	Cavia_porcellus
ENSODEG00000001826	-	71	77.992	ENSCCAG00000024189	-	87	74.453	Cebus_capucinus
ENSODEG00000001826	-	100	83.716	ENSCCAG00000028735	-	100	83.507	Cebus_capucinus
ENSODEG00000001826	-	100	84.551	ENSCATG00000035808	GRSF1	99	89.355	Cercocebus_atys
ENSODEG00000001826	-	77	93.075	ENSCLAG00000003057	GRSF1	100	93.075	Chinchilla_lanigera
ENSODEG00000001826	-	100	84.551	ENSCSAG00000004856	GRSF1	100	84.551	Chlorocebus_sabaeus
ENSODEG00000001826	-	100	65.458	ENSCPBG00000019502	GRSF1	86	65.458	Chrysemys_picta_bellii
ENSODEG00000001826	-	71	89.623	ENSCANG00000037992	GRSF1	100	89.623	Colobus_angolensis_palliatus
ENSODEG00000001826	-	100	82.892	ENSCGRG00001019953	Grsf1	99	89.474	Cricetulus_griseus_chok1gshd
ENSODEG00000001826	-	77	89.474	ENSCGRG00000005357	Grsf1	100	89.474	Cricetulus_griseus_crigri
ENSODEG00000001826	-	77	91.136	ENSDORG00000015145	Grsf1	100	94.891	Dipodomys_ordii
ENSODEG00000001826	-	74	88.116	ENSETEG00000013786	GRSF1	100	88.116	Echinops_telfairi
ENSODEG00000001826	-	100	85.417	ENSEASG00005016685	GRSF1	94	84.583	Equus_asinus_asinus
ENSODEG00000001826	-	100	85.595	ENSECAG00000024208	GRSF1	94	84.342	Equus_caballus
ENSODEG00000001826	-	77	41.436	ENSELUG00000011613	-	91	41.436	Esox_lucius
ENSODEG00000001826	-	100	85.595	ENSFCAG00000007270	GRSF1	100	84.969	Felis_catus
ENSODEG00000001826	-	72	53.623	ENSFALG00000008394	GRSF1	98	53.623	Ficedula_albicollis
ENSODEG00000001826	-	60	89.781	ENSFDAG00000008167	-	100	89.781	Fukomys_damarensis
ENSODEG00000001826	-	80	47.745	ENSGALG00000031160	GRSF1	77	48.541	Gallus_gallus
ENSODEG00000001826	-	100	65.605	ENSGAGG00000006013	GRSF1	99	65.180	Gopherus_agassizii
ENSODEG00000001826	-	71	88.679	ENSGGOG00000014852	-	100	88.679	Gorilla_gorilla
ENSODEG00000001826	-	100	86.752	ENSHGLG00000000661	GRSF1	100	88.366	Heterocephalus_glaber_female
ENSODEG00000001826	-	77	88.366	ENSHGLG00100005974	GRSF1	100	94.161	Heterocephalus_glaber_male
ENSODEG00000001826	-	100	76.068	ENSSTOG00000011569	GRSF1	99	90.859	Ictidomys_tridecemlineatus
ENSODEG00000001826	-	75	87.536	ENSJJAG00000005325	Grsf1	100	90.511	Jaculus_jaculus
ENSODEG00000001826	-	85	47.030	ENSLACG00000009507	GRSF1	97	51.977	Latimeria_chalumnae
ENSODEG00000001826	-	75	45.584	ENSLOCG00000011589	GRSF1	77	45.584	Lepisosteus_oculatus
ENSODEG00000001826	-	100	84.504	ENSLAFG00000017032	-	100	84.091	Loxodonta_africana
ENSODEG00000001826	-	100	84.342	ENSMFAG00000037346	GRSF1	99	89.032	Macaca_fascicularis
ENSODEG00000001826	-	100	84.342	ENSMMUG00000000380	GRSF1	99	89.286	Macaca_mulatta
ENSODEG00000001826	-	100	78.706	ENSMNEG00000023162	GRSF1	99	79.747	Macaca_nemestrina
ENSODEG00000001826	-	77	89.751	ENSMLEG00000007180	GRSF1	99	89.751	Mandrillus_leucophaeus
ENSODEG00000001826	-	72	50.148	ENSMGAG00000009940	GRSF1	98	50.148	Meleagris_gallopavo
ENSODEG00000001826	-	100	84.760	ENSMICG00000005385	GRSF1	99	88.705	Microcebus_murinus
ENSODEG00000001826	-	55	93.431	ENSMOCG00000012769	-	100	93.431	Microtus_ochrogaster
ENSODEG00000001826	-	100	75.258	ENSMODG00000019088	GRSF1	90	74.639	Monodelphis_domestica
ENSODEG00000001826	-	100	84.969	MGP_CAROLIEiJ_G0027377	Grsf1	100	92.701	Mus_caroli
ENSODEG00000001826	-	100	86.430	ENSMUSG00000044221	Grsf1	100	92.701	Mus_musculus
ENSODEG00000001826	-	100	83.925	MGP_PahariEiJ_G0017155	Grsf1	100	91.971	Mus_pahari
ENSODEG00000001826	-	100	86.221	MGP_SPRETEiJ_G0028374	Grsf1	99	89.751	Mus_spretus
ENSODEG00000001826	-	78	88.798	ENSMPUG00000009499	GRSF1	97	88.798	Mustela_putorius_furo
ENSODEG00000001826	-	77	86.849	ENSMLUG00000028158	GRSF1	100	86.849	Myotis_lucifugus
ENSODEG00000001826	-	55	92.701	ENSNGAG00000022132	-	100	92.701	Nannospalax_galili
ENSODEG00000001826	-	93	88.026	ENSNLEG00000007721	-	99	87.742	Nomascus_leucogenys
ENSODEG00000001826	-	76	68.715	ENSMEUG00000015942	GRSF1	99	68.715	Notamacropus_eugenii
ENSODEG00000001826	-	75	85.000	ENSOPRG00000010148	-	78	85.000	Ochotona_princeps
ENSODEG00000001826	-	72	61.789	ENSOANG00000013696	-	100	61.789	Ornithorhynchus_anatinus
ENSODEG00000001826	-	98	75.476	ENSOCUG00000010029	GRSF1	100	75.687	Oryctolagus_cuniculus
ENSODEG00000001826	-	77	86.027	ENSOGAG00000000141	-	100	86.027	Otolemur_garnettii
ENSODEG00000001826	-	99	70.779	ENSOGAG00000026370	-	99	70.563	Otolemur_garnettii
ENSODEG00000001826	-	77	89.315	ENSOARG00000011898	GRSF1	100	89.315	Ovis_aries
ENSODEG00000001826	-	71	88.994	ENSPPAG00000042456	-	100	88.994	Pan_paniscus
ENSODEG00000001826	-	100	85.595	ENSPPRG00000022913	GRSF1	100	84.969	Panthera_pardus
ENSODEG00000001826	-	77	88.920	ENSPTIG00000008060	GRSF1	99	88.920	Panthera_tigris_altaica
ENSODEG00000001826	-	98	83.087	ENSPTRG00000016136	GRSF1	99	88.387	Pan_troglodytes
ENSODEG00000001826	-	100	83.925	ENSPANG00000018597	GRSF1	99	88.387	Papio_anubis
ENSODEG00000001826	-	75	71.144	ENSPSIG00000014267	-	96	71.144	Pelodiscus_sinensis
ENSODEG00000001826	-	77	90.582	ENSPEMG00000012814	Grsf1	99	90.582	Peromyscus_maniculatus_bairdii
ENSODEG00000001826	-	100	75.260	ENSPCIG00000000627	GRSF1	100	74.428	Phascolarctos_cinereus
ENSODEG00000001826	-	100	71.310	ENSPPYG00000014812	GRSF1	100	69.854	Pongo_abelii
ENSODEG00000001826	-	99	84.632	ENSPCAG00000013949	GRSF1	100	82.684	Procavia_capensis
ENSODEG00000001826	-	100	82.692	ENSPVAG00000004338	GRSF1	100	82.906	Pteropus_vampyrus
ENSODEG00000001826	-	100	84.760	ENSRNOG00000003392	Grsf1	100	84.760	Rattus_norvegicus
ENSODEG00000001826	-	100	84.342	ENSRBIG00000036494	GRSF1	99	89.355	Rhinopithecus_bieti
ENSODEG00000001826	-	100	84.134	ENSRROG00000035735	GRSF1	99	89.032	Rhinopithecus_roxellana
ENSODEG00000001826	-	71	90.909	ENSSBOG00000032141	GRSF1	100	69.497	Saimiri_boliviensis_boliviensis
ENSODEG00000001826	-	80	79.412	ENSSHAG00000018365	GRSF1	97	79.412	Sarcophilus_harrisii
ENSODEG00000001826	-	71	88.636	ENSSARG00000011681	GRSF1	100	88.636	Sorex_araneus
ENSODEG00000001826	-	98	58.425	ENSSPUG00000007576	GRSF1	99	57.143	Sphenodon_punctatus
ENSODEG00000001826	-	100	83.925	ENSSSCG00000008940	GRSF1	100	83.299	Sus_scrofa
ENSODEG00000001826	-	73	53.602	ENSTGUG00000001644	GRSF1	99	53.314	Taeniopygia_guttata
ENSODEG00000001826	-	71	89.935	ENSTBEG00000010173	GRSF1	100	89.935	Tupaia_belangeri
ENSODEG00000001826	-	83	84.536	ENSTTRG00000008405	GRSF1	98	84.635	Tursiops_truncatus
ENSODEG00000001826	-	75	91.120	ENSUAMG00000008901	GRSF1	93	91.120	Ursus_americanus
ENSODEG00000001826	-	84	84.211	ENSUMAG00000003757	GRSF1	87	89.779	Ursus_maritimus
ENSODEG00000001826	-	77	77.285	ENSVPAG00000011889	GRSF1	100	77.285	Vicugna_pacos
ENSODEG00000001826	-	74	89.826	ENSVVUG00000004150	GRSF1	100	89.826	Vulpes_vulpes
ENSODEG00000001826	-	77	50.681	ENSXETG00000013850	grsf1	100	50.142	Xenopus_tropicalis