EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001853 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 906 bases
Position: chrJH651639.1:451832-452737
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000002380	CMS1	PF14617.6	5.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000002433	-	783	-	ENSODEP00000002380	260 (aa)	-	-

Gene Model

Click here to download ENSODEG00000001853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001853	-	100	84.229	ENSODEG00000005226	-	100	84.229
ENSODEG00000001853	-	100	79.004	ENSODEG00000003558	-	100	79.004
ENSODEG00000001853	-	100	67.279	ENSODEG00000009446	-	100	67.279

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001853	-	100	74.194	ENSG00000184220	CMSS1	98	76.364	Homo_sapiens
ENSODEG00000001853	-	71	55.446	ENSAPOG00000010604	cmss1	82	55.446	Acanthochromis_polyacanthus
ENSODEG00000001853	-	92	76.357	ENSAMEG00000004092	CMSS1	99	76.357	Ailuropoda_melanoleuca
ENSODEG00000001853	-	71	47.179	ENSACIG00000021854	cmss1	98	43.307	Amphilophus_citrinellus
ENSODEG00000001853	-	100	45.361	ENSAOCG00000013361	cmss1	100	46.918	Amphiprion_ocellaris
ENSODEG00000001853	-	100	46.416	ENSAPEG00000005829	cmss1	100	47.099	Amphiprion_percula
ENSODEG00000001853	-	100	46.233	ENSATEG00000008209	cmss1	100	47.751	Anabas_testudineus
ENSODEG00000001853	-	82	58.696	ENSAPLG00000010542	CMSS1	100	58.696	Anas_platyrhynchos
ENSODEG00000001853	-	92	53.030	ENSACAG00000011065	CMSS1	97	53.030	Anolis_carolinensis
ENSODEG00000001853	-	100	73.929	ENSANAG00000023565	CMSS1	100	73.929	Aotus_nancymaae
ENSODEG00000001853	-	100	43.986	ENSACLG00000027294	cmss1	100	45.392	Astatotilapia_calliptera
ENSODEG00000001853	-	100	39.262	ENSAMXG00000002046	cmss1	100	40.461	Astyanax_mexicanus
ENSODEG00000001853	-	100	73.118	ENSBTAG00000013663	CMSS1	100	74.552	Bos_taurus
ENSODEG00000001853	-	100	75.000	ENSCJAG00000000610	CMSS1	100	75.000	Callithrix_jacchus
ENSODEG00000001853	-	93	76.448	ENSCAFG00000009230	CMSS1	94	76.448	Canis_familiaris
ENSODEG00000001853	-	92	77.432	ENSCAFG00020009464	-	94	77.432	Canis_lupus_dingo
ENSODEG00000001853	-	79	74.439	ENSCAFG00020024156	-	66	76.168	Canis_lupus_dingo
ENSODEG00000001853	-	93	74.131	ENSCHIG00000013003	CMSS1	96	72.830	Capra_hircus
ENSODEG00000001853	-	96	70.370	ENSTSYG00000009266	CMSS1	98	73.152	Carlito_syrichta
ENSODEG00000001853	-	79	63.158	ENSCAPG00000013584	CMSS1	100	63.158	Cavia_aperea
ENSODEG00000001853	-	100	79.211	ENSCPOG00000014680	CMSS1	100	79.211	Cavia_porcellus
ENSODEG00000001853	-	100	75.000	ENSCCAG00000034685	CMSS1	100	75.000	Cebus_capucinus
ENSODEG00000001853	-	100	75.269	ENSCATG00000031980	CMSS1	100	75.269	Cercocebus_atys
ENSODEG00000001853	-	82	80.786	ENSCLAG00000011241	CMSS1	98	80.786	Chinchilla_lanigera
ENSODEG00000001853	-	87	76.955	ENSCSAG00000006024	CMSS1	99	76.955	Chlorocebus_sabaeus
ENSODEG00000001853	-	100	57.040	ENSCHOG00000012098	CMSS1	100	57.040	Choloepus_hoffmanni
ENSODEG00000001853	-	60	40.476	ENSCING00000014848	-	90	40.476	Ciona_intestinalis
ENSODEG00000001853	-	100	74.552	ENSCANG00000031337	CMSS1	100	74.552	Colobus_angolensis_palliatus
ENSODEG00000001853	-	100	67.626	ENSCGRG00001014305	Cmss1	100	67.626	Cricetulus_griseus_chok1gshd
ENSODEG00000001853	-	92	67.969	ENSCGRG00000006722	Cmss1	99	67.969	Cricetulus_griseus_crigri
ENSODEG00000001853	-	100	43.771	ENSCSEG00000004958	cmss1	100	44.932	Cynoglossus_semilaevis
ENSODEG00000001853	-	100	46.181	ENSCVAG00000005039	cmss1	100	46.875	Cyprinodon_variegatus
ENSODEG00000001853	-	100	41.017	ENSDARG00000112579	cmss1	100	41.781	Danio_rerio
ENSODEG00000001853	-	94	70.992	ENSDNOG00000040418	CMSS1	92	71.154	Dasypus_novemcinctus
ENSODEG00000001853	-	100	74.194	ENSDORG00000010461	Cmss1	100	74.194	Dipodomys_ordii
ENSODEG00000001853	-	93	71.042	ENSEASG00005010966	CMSS1	99	76.712	Equus_asinus_asinus
ENSODEG00000001853	-	95	75.000	ENSECAG00000015662	CMSS1	99	76.991	Equus_caballus
ENSODEG00000001853	-	83	75.581	ENSEEUG00000007624	-	80	75.581	Erinaceus_europaeus
ENSODEG00000001853	-	100	43.322	ENSELUG00000019459	cmss1	100	45.667	Esox_lucius
ENSODEG00000001853	-	100	78.136	ENSFCAG00000044577	CMSS1	100	78.136	Felis_catus
ENSODEG00000001853	-	85	54.852	ENSFALG00000005816	CMSS1	100	54.852	Ficedula_albicollis
ENSODEG00000001853	-	81	80.263	ENSFDAG00000012577	CMSS1	100	80.263	Fukomys_damarensis
ENSODEG00000001853	-	81	52.814	ENSFHEG00000012008	cmss1	95	52.814	Fundulus_heteroclitus
ENSODEG00000001853	-	99	45.196	ENSGMOG00000016729	cmss1	100	45.775	Gadus_morhua
ENSODEG00000001853	-	96	53.383	ENSGALG00000015267	CMSS1	99	54.231	Gallus_gallus
ENSODEG00000001853	-	73	54.106	ENSGAFG00000021217	cmss1	98	46.923	Gambusia_affinis
ENSODEG00000001853	-	99	43.011	ENSGACG00000002798	cmss1	100	44.326	Gasterosteus_aculeatus
ENSODEG00000001853	-	87	58.264	ENSGAGG00000019861	CMSS1	94	58.264	Gopherus_agassizii
ENSODEG00000001853	-	92	75.097	ENSGGOG00000014125	CMSS1	98	75.097	Gorilla_gorilla
ENSODEG00000001853	-	100	44.178	ENSHBUG00000008431	cmss1	100	45.172	Haplochromis_burtoni
ENSODEG00000001853	-	91	77.075	ENSHGLG00000019481	CMSS1	100	77.075	Heterocephalus_glaber_female
ENSODEG00000001853	-	92	77.043	ENSHGLG00100010314	CMSS1	100	77.043	Heterocephalus_glaber_male
ENSODEG00000001853	-	100	45.085	ENSHCOG00000003222	cmss1	100	46.980	Hippocampus_comes
ENSODEG00000001853	-	100	42.809	ENSIPUG00000011591	cmss1	100	42.424	Ictalurus_punctatus
ENSODEG00000001853	-	100	75.269	ENSSTOG00000019366	CMSS1	100	75.269	Ictidomys_tridecemlineatus
ENSODEG00000001853	-	100	73.477	ENSJJAG00000014894	Cmss1	100	73.477	Jaculus_jaculus
ENSODEG00000001853	-	71	48.980	ENSKMAG00000002390	cmss1	97	44.490	Kryptolebias_marmoratus
ENSODEG00000001853	-	71	50.990	ENSLBEG00000006298	cmss1	83	51.471	Labrus_bergylta
ENSODEG00000001853	-	81	56.522	ENSLACG00000009293	CMSS1	100	56.522	Latimeria_chalumnae
ENSODEG00000001853	-	100	45.804	ENSLOCG00000009391	cmss1	100	45.936	Lepisosteus_oculatus
ENSODEG00000001853	-	81	76.754	ENSLAFG00000017509	CMSS1	100	76.754	Loxodonta_africana
ENSODEG00000001853	-	100	74.910	ENSMFAG00000045006	CMSS1	100	74.910	Macaca_fascicularis
ENSODEG00000001853	-	100	74.552	ENSMMUG00000002939	CMSS1	98	76.818	Macaca_mulatta
ENSODEG00000001853	-	100	74.552	ENSMNEG00000031315	CMSS1	100	74.552	Macaca_nemestrina
ENSODEG00000001853	-	100	74.552	ENSMLEG00000033660	CMSS1	100	74.552	Mandrillus_leucophaeus
ENSODEG00000001853	-	100	47.260	ENSMAMG00000017176	cmss1	100	48.621	Mastacembelus_armatus
ENSODEG00000001853	-	100	43.986	ENSMZEG00005021886	cmss1	100	45.392	Maylandia_zebra
ENSODEG00000001853	-	81	57.895	ENSMGAG00000014360	CMSS1	100	57.895	Meleagris_gallopavo
ENSODEG00000001853	-	100	57.836	ENSMAUG00000020609	Cmss1	100	57.836	Mesocricetus_auratus
ENSODEG00000001853	-	100	76.703	ENSMICG00000048977	CMSS1	100	76.703	Microcebus_murinus
ENSODEG00000001853	-	100	69.643	ENSMOCG00000021937	Cmss1	100	69.643	Microtus_ochrogaster
ENSODEG00000001853	-	71	53.465	ENSMMOG00000019794	cmss1	84	53.465	Mola_mola
ENSODEG00000001853	-	96	59.176	ENSMODG00000002275	CMSS1	99	59.176	Monodelphis_domestica
ENSODEG00000001853	-	100	46.233	ENSMALG00000004250	cmss1	100	45.578	Monopterus_albus
ENSODEG00000001853	-	100	68.459	MGP_CAROLIEiJ_G0020824	Cmss1	100	68.459	Mus_caroli
ENSODEG00000001853	-	100	69.534	ENSMUSG00000022748	Cmss1	100	69.534	Mus_musculus
ENSODEG00000001853	-	100	69.534	MGP_PahariEiJ_G0016524	Cmss1	100	69.534	Mus_pahari
ENSODEG00000001853	-	100	69.534	MGP_SPRETEiJ_G0021724	Cmss1	100	69.534	Mus_spretus
ENSODEG00000001853	-	87	80.165	ENSMPUG00000011324	CMSS1	99	77.519	Mustela_putorius_furo
ENSODEG00000001853	-	93	74.330	ENSMLUG00000001131	CMSS1	99	74.330	Myotis_lucifugus
ENSODEG00000001853	-	100	71.685	ENSNGAG00000020316	Cmss1	100	71.685	Nannospalax_galili
ENSODEG00000001853	-	100	43.098	ENSNBRG00000003095	cmss1	100	45.051	Neolamprologus_brichardi
ENSODEG00000001853	-	100	75.986	ENSNLEG00000034172	CMSS1	100	75.986	Nomascus_leucogenys
ENSODEG00000001853	-	81	53.947	ENSMEUG00000014505	CMSS1	100	53.947	Notamacropus_eugenii
ENSODEG00000001853	-	100	76.259	ENSOPRG00000002986	CMSS1	100	76.259	Ochotona_princeps
ENSODEG00000001853	-	71	51.980	ENSONIG00000006678	cmss1	77	51.980	Oreochromis_niloticus
ENSODEG00000001853	-	92	60.769	ENSOANG00000007529	CMSS1	100	63.519	Ornithorhynchus_anatinus
ENSODEG00000001853	-	93	74.131	ENSOCUG00000025366	CMSS1	94	74.131	Oryctolagus_cuniculus
ENSODEG00000001853	-	100	50.000	ENSORLG00000020340	cmss1	100	47.945	Oryzias_latipes
ENSODEG00000001853	-	82	49.545	ENSORLG00020012235	cmss1	98	49.774	Oryzias_latipes_hni
ENSODEG00000001853	-	71	51.515	ENSORLG00015015551	cmss1	75	51.515	Oryzias_latipes_hsok
ENSODEG00000001853	-	100	48.966	ENSOMEG00000012555	cmss1	100	48.797	Oryzias_melastigma
ENSODEG00000001853	-	81	76.316	ENSOGAG00000002045	CMSS1	100	76.316	Otolemur_garnettii
ENSODEG00000001853	-	93	74.231	ENSOARG00000017899	CMSS1	89	74.231	Ovis_aries
ENSODEG00000001853	-	97	71.747	ENSPPAG00000038515	CMSS1	99	71.747	Pan_paniscus
ENSODEG00000001853	-	100	78.495	ENSPPRG00000016767	CMSS1	100	78.495	Panthera_pardus
ENSODEG00000001853	-	100	77.778	ENSPTIG00000018274	CMSS1	100	77.778	Panthera_tigris_altaica
ENSODEG00000001853	-	100	73.835	ENSPTRG00000015157	CMSS1	99	76.132	Pan_troglodytes
ENSODEG00000001853	-	94	72.137	ENSPANG00000019980	CMSS1	99	73.152	Papio_anubis
ENSODEG00000001853	-	98	48.227	ENSPKIG00000012609	cmss1	97	51.331	Paramormyrops_kingsleyae
ENSODEG00000001853	-	82	60.699	ENSPSIG00000003849	CMSS1	100	60.699	Pelodiscus_sinensis
ENSODEG00000001853	-	71	54.187	ENSPMGG00000010286	cmss1	87	54.187	Periophthalmus_magnuspinnatus
ENSODEG00000001853	-	100	70.357	ENSPEMG00000016384	Cmss1	100	70.357	Peromyscus_maniculatus_bairdii
ENSODEG00000001853	-	71	47.030	ENSPMAG00000001146	cmss1	99	47.030	Petromyzon_marinus
ENSODEG00000001853	-	93	59.542	ENSPCIG00000015656	CMSS1	98	59.542	Phascolarctos_cinereus
ENSODEG00000001853	-	100	46.853	ENSPFOG00000016849	cmss1	100	47.203	Poecilia_formosa
ENSODEG00000001853	-	100	46.503	ENSPLAG00000008323	cmss1	100	46.853	Poecilia_latipinna
ENSODEG00000001853	-	100	46.528	ENSPMEG00000021020	cmss1	100	47.569	Poecilia_mexicana
ENSODEG00000001853	-	71	53.465	ENSPREG00000007618	cmss1	90	48.106	Poecilia_reticulata
ENSODEG00000001853	-	100	74.194	ENSPPYG00000013606	CMSS1	100	74.194	Pongo_abelii
ENSODEG00000001853	-	100	76.344	ENSPCOG00000020035	CMSS1	100	76.344	Propithecus_coquereli
ENSODEG00000001853	-	100	66.308	ENSPVAG00000017031	CMSS1	100	66.308	Pteropus_vampyrus
ENSODEG00000001853	-	90	44.528	ENSPNYG00000013428	cmss1	97	46.067	Pundamilia_nyererei
ENSODEG00000001853	-	100	44.558	ENSPNAG00000007912	cmss1	100	44.218	Pygocentrus_nattereri
ENSODEG00000001853	-	93	67.308	ENSRNOG00000027888	Cmss1	100	67.308	Rattus_norvegicus
ENSODEG00000001853	-	100	74.910	ENSRBIG00000037931	CMSS1	100	74.910	Rhinopithecus_bieti
ENSODEG00000001853	-	100	74.910	ENSRROG00000042910	CMSS1	100	74.910	Rhinopithecus_roxellana
ENSODEG00000001853	-	92	74.419	ENSSBOG00000030980	CMSS1	98	74.419	Saimiri_boliviensis_boliviensis
ENSODEG00000001853	-	89	61.111	ENSSHAG00000009321	CMSS1	99	61.111	Sarcophilus_harrisii
ENSODEG00000001853	-	100	47.603	ENSSFOG00015001509	cmss1	100	47.931	Scleropages_formosus
ENSODEG00000001853	-	100	46.622	ENSSMAG00000001653	cmss1	100	46.780	Scophthalmus_maximus
ENSODEG00000001853	-	100	45.890	ENSSDUG00000007719	cmss1	100	48.966	Seriola_dumerili
ENSODEG00000001853	-	73	55.556	ENSSLDG00000012300	cmss1	80	49.741	Seriola_lalandi_dorsalis
ENSODEG00000001853	-	100	60.000	ENSSARG00000003584	CMSS1	100	60.000	Sorex_araneus
ENSODEG00000001853	-	80	59.292	ENSSPUG00000003865	CMSS1	100	59.292	Sphenodon_punctatus
ENSODEG00000001853	-	73	54.854	ENSSPAG00000019182	cmss1	63	54.950	Stegastes_partitus
ENSODEG00000001853	-	100	76.703	ENSSSCG00000011970	CMSS1	100	76.703	Sus_scrofa
ENSODEG00000001853	-	82	56.332	ENSTGUG00000013635	CMSS1	100	56.332	Taeniopygia_guttata
ENSODEG00000001853	-	100	43.972	ENSTRUG00000015265	cmss1	100	43.972	Takifugu_rubripes
ENSODEG00000001853	-	71	47.030	ENSTNIG00000002880	cmss1	99	40.146	Tetraodon_nigroviridis
ENSODEG00000001853	-	83	83.962	ENSTBEG00000016722	CMSS1	80	83.962	Tupaia_belangeri
ENSODEG00000001853	-	100	75.725	ENSTTRG00000001562	CMSS1	100	75.725	Tursiops_truncatus
ENSODEG00000001853	-	97	75.092	ENSUAMG00000024209	CMSS1	100	80.269	Ursus_americanus
ENSODEG00000001853	-	96	75.655	ENSUMAG00000001983	CMSS1	99	77.432	Ursus_maritimus
ENSODEG00000001853	-	100	58.781	ENSVPAG00000000263	CMSS1	100	58.781	Vicugna_pacos
ENSODEG00000001853	-	88	77.642	ENSVVUG00000021647	-	100	77.642	Vulpes_vulpes
ENSODEG00000001853	-	77	78.341	ENSVVUG00000007776	-	85	78.341	Vulpes_vulpes
ENSODEG00000001853	-	100	50.355	ENSXETG00000011858	cmss1	100	50.355	Xenopus_tropicalis
ENSODEG00000001853	-	73	53.365	ENSXCOG00000018724	cmss1	69	53.465	Xiphophorus_couchianus
ENSODEG00000001853	-	73	53.365	ENSXMAG00000011243	cmss1	76	53.465	Xiphophorus_maculatus