EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001866 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1072 bases
Position: chrJH651753.1:864860-865931
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000002394	zf-CCHC	PF00098.23	1.5e-05	1	1
ENSODEP00000002394	RRM_1	PF00076.22	7.7e-26	1	2
ENSODEP00000002394	RRM_1	PF00076.22	7.7e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000002447	-	1029	-	ENSODEP00000002394	342 (aa)	-	-

Gene Model

Click here to download ENSODEG00000001866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001866	-	100	73.259	ENSODEG00000017696	-	100	74.095
ENSODEG00000001866	-	100	80.000	ENSODEG00000017717	RBM14	96	87.591

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001866	-	96	85.366	ENSG00000173933	RBM4	100	85.366	Homo_sapiens
ENSODEG00000001866	-	100	72.500	ENSG00000173914	RBM4B	96	86.861	Homo_sapiens
ENSODEG00000001866	-	99	57.260	ENSG00000248643	RBM14-RBM4	100	56.712	Homo_sapiens
ENSODEG00000001866	-	100	73.056	ENSAMEG00000010906	RBM4B	100	73.816	Ailuropoda_melanoleuca
ENSODEG00000001866	-	100	79.178	ENSAMEG00000010914	RBM4	100	78.630	Ailuropoda_melanoleuca
ENSODEG00000001866	-	100	72.500	ENSANAG00000023478	RBM4B	96	86.861	Aotus_nancymaae
ENSODEG00000001866	-	57	85.401	ENSANAG00000033986	-	83	85.401	Aotus_nancymaae
ENSODEG00000001866	-	100	73.611	ENSBTAG00000000423	RBM4B	100	74.373	Bos_taurus
ENSODEG00000001866	-	100	79.558	ENSBTAG00000031688	RBM4	100	79.282	Bos_taurus
ENSODEG00000001866	-	100	72.222	ENSCJAG00000013666	RBM4B	100	83.562	Callithrix_jacchus
ENSODEG00000001866	-	100	72.778	ENSCAFG00000012378	RBM4B	100	73.538	Canis_familiaris
ENSODEG00000001866	-	100	79.178	ENSCAFG00000012388	RBM4	100	78.630	Canis_familiaris
ENSODEG00000001866	-	100	72.778	ENSCAFG00020015519	RBM4B	100	73.538	Canis_lupus_dingo
ENSODEG00000001866	-	100	79.178	ENSCAFG00020015515	RBM4	100	78.630	Canis_lupus_dingo
ENSODEG00000001866	-	100	79.558	ENSCHIG00000020613	RBM4	100	79.282	Capra_hircus
ENSODEG00000001866	-	100	73.611	ENSCHIG00000008907	RBM4B	100	74.373	Capra_hircus
ENSODEG00000001866	-	64	63.559	ENSTSYG00000009580	RBM4B	96	64.681	Carlito_syrichta
ENSODEG00000001866	-	100	80.000	ENSCAPG00000016600	RBM4	96	87.591	Cavia_aperea
ENSODEG00000001866	-	100	72.778	ENSCAPG00000009570	RBM4B	100	73.538	Cavia_aperea
ENSODEG00000001866	-	100	72.778	ENSCPOG00000013689	RBM4B	100	73.538	Cavia_porcellus
ENSODEG00000001866	-	100	80.000	ENSCPOG00000013194	RBM4	96	87.591	Cavia_porcellus
ENSODEG00000001866	-	100	72.500	ENSCCAG00000016501	RBM4B	96	86.861	Cebus_capucinus
ENSODEG00000001866	-	56	63.684	ENSCCAG00000023319	-	94	63.684	Cebus_capucinus
ENSODEG00000001866	-	100	72.500	ENSCATG00000035353	RBM4B	96	86.861	Cercocebus_atys
ENSODEG00000001866	-	100	72.778	ENSCLAG00000015287	RBM4B	100	73.259	Chinchilla_lanigera
ENSODEG00000001866	-	100	79.726	ENSCLAG00000014756	RBM4	96	87.591	Chinchilla_lanigera
ENSODEG00000001866	-	100	72.500	ENSCSAG00000008361	RBM4B	100	73.259	Chlorocebus_sabaeus
ENSODEG00000001866	-	60	74.009	ENSCHOG00000009753	RBM14-RBM4	100	73.128	Choloepus_hoffmanni
ENSODEG00000001866	-	100	73.611	ENSCHOG00000002892	RBM4B	100	74.373	Choloepus_hoffmanni
ENSODEG00000001866	-	100	62.766	ENSCPBG00000023800	-	100	62.500	Chrysemys_picta_bellii
ENSODEG00000001866	-	100	72.500	ENSCANG00000021868	RBM4B	96	86.861	Colobus_angolensis_palliatus
ENSODEG00000001866	-	100	79.444	ENSCGRG00001016609	-	96	86.861	Cricetulus_griseus_chok1gshd
ENSODEG00000001866	-	100	70.833	ENSCGRG00001024693	Rbm4b	100	71.588	Cricetulus_griseus_chok1gshd
ENSODEG00000001866	-	100	70.833	ENSCGRG00000012112	Rbm4b	100	71.588	Cricetulus_griseus_crigri
ENSODEG00000001866	-	100	79.444	ENSCGRG00000010183	-	96	86.861	Cricetulus_griseus_crigri
ENSODEG00000001866	-	100	78.904	ENSDNOG00000032390	RBM4	100	78.356	Dasypus_novemcinctus
ENSODEG00000001866	-	100	73.333	ENSDNOG00000019500	-	100	73.538	Dasypus_novemcinctus
ENSODEG00000001866	-	100	72.222	ENSDNOG00000045639	-	100	72.423	Dasypus_novemcinctus
ENSODEG00000001866	-	100	71.111	ENSDORG00000029108	Rbm4b	100	71.309	Dipodomys_ordii
ENSODEG00000001866	-	100	79.834	ENSDORG00000004538	-	96	87.591	Dipodomys_ordii
ENSODEG00000001866	-	60	60.096	ENSETEG00000018142	-	100	59.615	Echinops_telfairi
ENSODEG00000001866	-	100	72.778	ENSEASG00005005068	RBM4B	100	73.538	Equus_asinus_asinus
ENSODEG00000001866	-	100	79.778	ENSEASG00005005064	RBM4	100	79.778	Equus_asinus_asinus
ENSODEG00000001866	-	100	72.500	ENSECAG00000022987	RBM4B	100	73.259	Equus_caballus
ENSODEG00000001866	-	100	79.778	ENSECAG00000022940	RBM4	100	79.778	Equus_caballus
ENSODEG00000001866	-	100	71.703	ENSEEUG00000000058	RBM4B	100	72.253	Erinaceus_europaeus
ENSODEG00000001866	-	100	79.178	ENSFCAG00000029651	RBM4	96	86.861	Felis_catus
ENSODEG00000001866	-	100	73.333	ENSFCAG00000007394	RBM4B	96	86.861	Felis_catus
ENSODEG00000001866	-	85	68.061	ENSFALG00000002073	-	100	57.967	Ficedula_albicollis
ENSODEG00000001866	-	53	83.200	ENSFDAG00000013661	-	92	83.200	Fukomys_damarensis
ENSODEG00000001866	-	100	72.778	ENSFDAG00000015530	RBM4B	100	73.259	Fukomys_damarensis
ENSODEG00000001866	-	100	79.726	ENSFDAG00000005447	RBM4	96	87.591	Fukomys_damarensis
ENSODEG00000001866	-	100	63.539	ENSGALG00000037946	-	100	63.957	Gallus_gallus
ENSODEG00000001866	-	100	62.766	ENSGAGG00000008553	-	100	62.500	Gopherus_agassizii
ENSODEG00000001866	-	100	72.500	ENSGGOG00000011698	RBM4B	96	86.861	Gorilla_gorilla
ENSODEG00000001866	-	77	47.664	ENSHGLG00000000117	-	95	57.835	Heterocephalus_glaber_female
ENSODEG00000001866	-	100	79.726	ENSHGLG00000009991	RBM4	96	87.591	Heterocephalus_glaber_female
ENSODEG00000001866	-	100	62.396	ENSHGLG00000002853	-	100	62.117	Heterocephalus_glaber_female
ENSODEG00000001866	-	100	73.056	ENSHGLG00000016412	-	100	73.816	Heterocephalus_glaber_female
ENSODEG00000001866	-	100	71.745	ENSHGLG00100003978	-	100	72.222	Heterocephalus_glaber_male
ENSODEG00000001866	-	100	69.252	ENSHGLG00100003854	RBM4	96	87.591	Heterocephalus_glaber_male
ENSODEG00000001866	-	95	63.265	ENSHGLG00100020033	-	100	62.974	Heterocephalus_glaber_male
ENSODEG00000001866	-	100	79.452	ENSSTOG00000022811	RBM4	96	86.861	Ictidomys_tridecemlineatus
ENSODEG00000001866	-	100	73.056	ENSSTOG00000011226	RBM4B	100	73.816	Ictidomys_tridecemlineatus
ENSODEG00000001866	-	100	70.000	ENSJJAG00000020870	Rbm4b	100	70.474	Jaculus_jaculus
ENSODEG00000001866	-	100	71.389	ENSLAFG00000002285	RBM4B	100	72.145	Loxodonta_africana
ENSODEG00000001866	-	100	77.534	ENSLAFG00000028147	-	100	76.986	Loxodonta_africana
ENSODEG00000001866	-	100	72.500	ENSMFAG00000033927	RBM4B	99	83.562	Macaca_fascicularis
ENSODEG00000001866	-	100	72.500	ENSMNEG00000043371	RBM4B	96	86.861	Macaca_nemestrina
ENSODEG00000001866	-	100	72.500	ENSMLEG00000028563	RBM4B	96	86.861	Mandrillus_leucophaeus
ENSODEG00000001866	-	100	70.833	ENSMAUG00000017027	Rbm4b	100	71.588	Mesocricetus_auratus
ENSODEG00000001866	-	100	73.333	ENSMICG00000003820	RBM4B	96	86.861	Microcebus_murinus
ENSODEG00000001866	-	100	70.833	ENSMOCG00000001835	Rbm4b	100	71.031	Microtus_ochrogaster
ENSODEG00000001866	-	100	73.641	ENSMODG00000008056	-	100	73.370	Monodelphis_domestica
ENSODEG00000001866	-	100	77.285	MGP_CAROLIEiJ_G0022516	-	96	86.861	Mus_caroli
ENSODEG00000001866	-	100	71.389	MGP_CAROLIEiJ_G0022515	Rbm4b	100	71.588	Mus_caroli
ENSODEG00000001866	-	99	54.972	MGP_CAROLIEiJ_G0022514	-	100	56.906	Mus_caroli
ENSODEG00000001866	-	100	71.389	ENSMUSG00000033760	Rbm4b	90	86.861	Mus_musculus
ENSODEG00000001866	-	100	77.285	ENSMUSG00000094936	Rbm4	99	85.965	Mus_musculus
ENSODEG00000001866	-	100	77.285	ENSMUSG00000096370	Gm21992	100	79.224	Mus_musculus
ENSODEG00000001866	-	100	77.072	MGP_PahariEiJ_G0014011	-	100	79.006	Mus_pahari
ENSODEG00000001866	-	100	71.389	MGP_PahariEiJ_G0014012	Rbm4b	100	71.309	Mus_pahari
ENSODEG00000001866	-	100	77.072	MGP_PahariEiJ_G0014013	-	96	86.861	Mus_pahari
ENSODEG00000001866	-	88	88.571	MGP_SPRETEiJ_G0023430	-	100	88.571	Mus_spretus
ENSODEG00000001866	-	100	60.071	MGP_SPRETEiJ_G0023429	-	100	60.284	Mus_spretus
ENSODEG00000001866	-	88	88.571	MGP_SPRETEiJ_G0023428	-	94	88.571	Mus_spretus
ENSODEG00000001866	-	100	73.333	ENSMPUG00000003450	RBM4B	100	74.095	Mustela_putorius_furo
ENSODEG00000001866	-	100	79.452	ENSMPUG00000003443	RBM4	100	78.904	Mustela_putorius_furo
ENSODEG00000001866	-	100	71.389	ENSMLUG00000001290	RBM4B	100	71.309	Myotis_lucifugus
ENSODEG00000001866	-	99	77.348	ENSMLUG00000004076	RBM4	95	76.796	Myotis_lucifugus
ENSODEG00000001866	-	100	72.145	ENSNGAG00000016292	Rbm4b	100	72.145	Nannospalax_galili
ENSODEG00000001866	-	100	79.396	ENSNLEG00000035021	RBM4	96	86.861	Nomascus_leucogenys
ENSODEG00000001866	-	100	71.667	ENSNLEG00000006213	RBM4B	96	86.861	Nomascus_leucogenys
ENSODEG00000001866	-	100	72.176	ENSMEUG00000001445	-	100	72.452	Notamacropus_eugenii
ENSODEG00000001866	-	60	65.198	ENSMEUG00000005739	-	100	65.789	Notamacropus_eugenii
ENSODEG00000001866	-	100	78.904	ENSOPRG00000009149	RBM4	100	78.356	Ochotona_princeps
ENSODEG00000001866	-	100	73.056	ENSOPRG00000009158	RBM4B	100	73.816	Ochotona_princeps
ENSODEG00000001866	-	100	71.591	ENSOANG00000011036	-	100	71.023	Ornithorhynchus_anatinus
ENSODEG00000001866	-	100	69.231	ENSOANG00000003143	-	84	68.946	Ornithorhynchus_anatinus
ENSODEG00000001866	-	100	72.778	ENSOCUG00000006695	LARK	100	73.538	Oryctolagus_cuniculus
ENSODEG00000001866	-	100	79.452	ENSOCUG00000004731	RBM4	100	78.904	Oryctolagus_cuniculus
ENSODEG00000001866	-	100	79.452	ENSOGAG00000015647	RBM4	100	78.904	Otolemur_garnettii
ENSODEG00000001866	-	100	72.778	ENSOGAG00000015648	RBM4B	100	73.538	Otolemur_garnettii
ENSODEG00000001866	-	100	77.348	ENSOARG00000007700	RBM4	100	77.072	Ovis_aries
ENSODEG00000001866	-	100	72.527	ENSOARG00000007759	RBM4B	100	73.003	Ovis_aries
ENSODEG00000001866	-	100	72.500	ENSPPAG00000015125	RBM4B	96	86.861	Pan_paniscus
ENSODEG00000001866	-	100	73.056	ENSPPRG00000003388	RBM4B	96	86.861	Panthera_pardus
ENSODEG00000001866	-	100	79.178	ENSPPRG00000003533	RBM4	96	86.861	Panthera_pardus
ENSODEG00000001866	-	100	71.154	ENSPTIG00000016180	RBM4	96	87.591	Panthera_tigris_altaica
ENSODEG00000001866	-	100	73.056	ENSPTIG00000015426	RBM4B	96	86.861	Panthera_tigris_altaica
ENSODEG00000001866	-	100	72.500	ENSPTRG00000003935	RBM4B	96	86.861	Pan_troglodytes
ENSODEG00000001866	-	100	72.500	ENSPANG00000020672	RBM4B	96	86.861	Papio_anubis
ENSODEG00000001866	-	76	64.789	ENSPSIG00000003477	-	94	63.158	Pelodiscus_sinensis
ENSODEG00000001866	-	100	64.305	ENSPSIG00000003430	-	100	62.943	Pelodiscus_sinensis
ENSODEG00000001866	-	100	71.667	ENSPEMG00000009144	Rbm4b	100	72.423	Peromyscus_maniculatus_bairdii
ENSODEG00000001866	-	100	78.297	ENSPPYG00000003012	RBM4	100	77.747	Pongo_abelii
ENSODEG00000001866	-	100	72.500	ENSPPYG00000003010	RBM4B	100	73.259	Pongo_abelii
ENSODEG00000001866	-	100	77.808	ENSPCAG00000003393	-	100	77.260	Procavia_capensis
ENSODEG00000001866	-	100	73.056	ENSPCOG00000027885	RBM4B	96	86.861	Propithecus_coquereli
ENSODEG00000001866	-	100	73.056	ENSPVAG00000010487	RBM4B	100	73.816	Pteropus_vampyrus
ENSODEG00000001866	-	100	79.178	ENSPVAG00000010486	RBM4	100	78.630	Pteropus_vampyrus
ENSODEG00000001866	-	100	77.260	ENSRNOG00000050741	Rbm4	96	86.861	Rattus_norvegicus
ENSODEG00000001866	-	100	71.944	ENSRNOG00000061795	Rbm4b	100	71.866	Rattus_norvegicus
ENSODEG00000001866	-	100	72.500	ENSRBIG00000019394	RBM4B	96	86.861	Rhinopithecus_bieti
ENSODEG00000001866	-	100	72.500	ENSRROG00000032850	RBM4B	96	86.861	Rhinopithecus_roxellana
ENSODEG00000001866	-	77	86.861	ENSRROG00000032796	-	90	86.620	Rhinopithecus_roxellana
ENSODEG00000001866	-	100	71.944	ENSSBOG00000034474	RBM4B	96	86.131	Saimiri_boliviensis_boliviensis
ENSODEG00000001866	-	100	72.222	ENSSHAG00000008386	-	100	71.667	Sarcophilus_harrisii
ENSODEG00000001866	-	100	73.611	ENSSARG00000010710	RBM4B	100	74.095	Sorex_araneus
ENSODEG00000001866	-	100	79.178	ENSSSCG00000032437	RBM4	100	78.630	Sus_scrofa
ENSODEG00000001866	-	76	63.986	ENSTGUG00000016779	-	93	64.437	Taeniopygia_guttata
ENSODEG00000001866	-	100	71.111	ENSTBEG00000003748	RBM4B	100	71.588	Tupaia_belangeri
ENSODEG00000001866	-	63	79.545	ENSTBEG00000003727	-	70	79.452	Tupaia_belangeri
ENSODEG00000001866	-	100	72.778	ENSTTRG00000011166	RBM4B	100	73.538	Tursiops_truncatus
ENSODEG00000001866	-	100	78.630	ENSTTRG00000011164	RBM4	100	78.082	Tursiops_truncatus
ENSODEG00000001866	-	100	73.333	ENSUAMG00000004745	RBM4B	100	74.095	Ursus_americanus
ENSODEG00000001866	-	100	79.178	ENSUAMG00000014882	RBM4	96	86.861	Ursus_americanus
ENSODEG00000001866	-	65	79.149	ENSUMAG00000011738	-	96	86.131	Ursus_maritimus
ENSODEG00000001866	-	100	72.778	ENSVPAG00000001950	RBM4B	100	73.538	Vicugna_pacos
ENSODEG00000001866	-	100	78.992	ENSVPAG00000001949	RBM4	100	78.431	Vicugna_pacos
ENSODEG00000001866	-	100	72.778	ENSVVUG00000010619	RBM4B	100	73.538	Vulpes_vulpes
ENSODEG00000001866	-	100	78.630	ENSVVUG00000010622	RBM4	100	78.082	Vulpes_vulpes
ENSODEG00000001866	-	57	78.102	ENSVVUG00000011717	-	93	78.102	Vulpes_vulpes