EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000001937 (Gene tree)
Gene ID: 101591851
Gene Symbol: -
Alias: PC4|p14|p15
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 18021 bases
Position: chrJH651664.1:617573-635593
Accession: 101591851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000002492	PC4	PF02229.16	6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000002547	-	669	XM_004642288	ENSODEP00000002492	127 (aa)	XP_004642345	UPI0000044938

Gene Model

Click here to download ENSODEG00000001937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000001937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000001937	-	96	96.721	ENSODEG00000015114	-	98	96.721
ENSODEG00000001937	-	100	86.614	ENSODEG00000004776	-	100	86.614
ENSODEG00000001937	-	100	93.701	ENSODEG00000014558	-	84	93.701

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000001937	-	100	100.000	ENSG00000113387	SUB1	100	100.000	Homo_sapiens
ENSODEG00000001937	-	100	70.079	ENSAPOG00000005917	SUB1	100	66.142	Acanthochromis_polyacanthus
ENSODEG00000001937	-	100	99.213	ENSAMEG00000006238	SUB1	95	99.213	Ailuropoda_melanoleuca
ENSODEG00000001937	-	100	72.441	ENSACIG00000015976	sub1b	100	68.504	Amphilophus_citrinellus
ENSODEG00000001937	-	91	68.966	ENSAOCG00000007313	-	82	74.510	Amphiprion_ocellaris
ENSODEG00000001937	-	85	70.370	ENSAOCG00000002323	-	75	71.739	Amphiprion_ocellaris
ENSODEG00000001937	-	51	70.769	ENSAPEG00000014618	-	62	70.769	Amphiprion_percula
ENSODEG00000001937	-	87	66.071	ENSAPEG00000017151	-	71	71.739	Amphiprion_percula
ENSODEG00000001937	-	100	73.228	ENSAPEG00000024347	sub1b	100	69.291	Amphiprion_percula
ENSODEG00000001937	-	100	72.441	ENSATEG00000010340	sub1b	100	68.504	Anabas_testudineus
ENSODEG00000001937	-	100	79.851	ENSACAG00000007974	SUB1	100	79.851	Anolis_carolinensis
ENSODEG00000001937	-	100	100.000	ENSANAG00000011651	-	100	100.000	Aotus_nancymaae
ENSODEG00000001937	-	100	95.276	ENSANAG00000023392	-	83	95.276	Aotus_nancymaae
ENSODEG00000001937	-	100	74.016	ENSACLG00000016875	sub1b	64	70.079	Astatotilapia_calliptera
ENSODEG00000001937	-	100	77.953	ENSAMXG00000037104	sub1b	100	74.016	Astyanax_mexicanus
ENSODEG00000001937	-	100	99.213	ENSBTAG00000021965	SUB1	100	99.213	Bos_taurus
ENSODEG00000001937	-	80	100.000	ENSCJAG00000018718	SUB1	98	100.000	Callithrix_jacchus
ENSODEG00000001937	-	91	95.652	ENSCAFG00000024488	-	86	95.370	Canis_familiaris
ENSODEG00000001937	-	100	99.213	ENSCAFG00000016713	-	96	99.213	Canis_familiaris
ENSODEG00000001937	-	100	99.213	ENSCAFG00000018879	-	88	99.213	Canis_familiaris
ENSODEG00000001937	-	100	97.656	ENSCAFG00020011479	-	77	97.656	Canis_lupus_dingo
ENSODEG00000001937	-	100	99.213	ENSCAFG00020016840	-	100	99.213	Canis_lupus_dingo
ENSODEG00000001937	-	100	100.000	ENSCHIG00000008460	SUB1	100	100.000	Capra_hircus
ENSODEG00000001937	-	100	100.000	ENSTSYG00000029948	-	100	100.000	Carlito_syrichta
ENSODEG00000001937	-	100	88.189	ENSTSYG00000035366	-	83	88.189	Carlito_syrichta
ENSODEG00000001937	-	100	92.308	ENSTSYG00000014069	-	93	92.308	Carlito_syrichta
ENSODEG00000001937	-	100	100.000	ENSCPOG00000031334	SUB1	100	100.000	Cavia_porcellus
ENSODEG00000001937	-	100	100.000	ENSCCAG00000023605	-	100	100.000	Cebus_capucinus
ENSODEG00000001937	-	100	96.063	ENSCCAG00000033751	-	95	96.063	Cebus_capucinus
ENSODEG00000001937	-	100	95.276	ENSCCAG00000020604	-	100	95.276	Cebus_capucinus
ENSODEG00000001937	-	100	92.913	ENSCCAG00000017043	-	93	92.913	Cebus_capucinus
ENSODEG00000001937	-	100	100.000	ENSCATG00000031199	SUB1	100	100.000	Cercocebus_atys
ENSODEG00000001937	-	100	99.219	ENSCLAG00000007522	SUB1	100	99.219	Chinchilla_lanigera
ENSODEG00000001937	-	100	100.000	ENSCSAG00000017172	-	100	100.000	Chlorocebus_sabaeus
ENSODEG00000001937	-	100	96.063	ENSCSAG00000019449	-	100	96.063	Chlorocebus_sabaeus
ENSODEG00000001937	-	100	90.551	ENSCPBG00000024218	SUB1	79	88.189	Chrysemys_picta_bellii
ENSODEG00000001937	-	100	100.000	ENSCANG00000029372	SUB1	100	100.000	Colobus_angolensis_palliatus
ENSODEG00000001937	-	100	78.740	ENSCANG00000028665	-	90	78.740	Colobus_angolensis_palliatus
ENSODEG00000001937	-	100	78.740	ENSCGRG00001014660	-	100	78.740	Cricetulus_griseus_chok1gshd
ENSODEG00000001937	-	100	77.165	ENSCGRG00001016254	-	100	77.165	Cricetulus_griseus_chok1gshd
ENSODEG00000001937	-	100	94.488	ENSCGRG00001003473	-	100	94.488	Cricetulus_griseus_chok1gshd
ENSODEG00000001937	-	100	78.740	ENSCGRG00000019368	-	100	78.740	Cricetulus_griseus_crigri
ENSODEG00000001937	-	100	94.488	ENSCGRG00000001133	-	100	94.488	Cricetulus_griseus_crigri
ENSODEG00000001937	-	100	81.102	ENSCGRG00000001489	-	100	81.102	Cricetulus_griseus_crigri
ENSODEG00000001937	-	100	71.654	ENSDARG00000007720	sub1b	100	66.142	Danio_rerio
ENSODEG00000001937	-	99	76.984	ENSDARG00000053446	sub1a	100	75.591	Danio_rerio
ENSODEG00000001937	-	100	96.850	ENSDNOG00000040794	-	100	96.850	Dasypus_novemcinctus
ENSODEG00000001937	-	100	95.276	ENSDNOG00000032396	-	100	95.276	Dasypus_novemcinctus
ENSODEG00000001937	-	100	96.850	ENSDORG00000013916	Sub1	100	96.850	Dipodomys_ordii
ENSODEG00000001937	-	79	54.902	ENSEBUG00000008746	sub1a	53	54.369	Eptatretus_burgeri
ENSODEG00000001937	-	100	100.000	ENSEASG00005007099	SUB1	100	100.000	Equus_asinus_asinus
ENSODEG00000001937	-	100	100.000	ENSECAG00000012399	SUB1	100	100.000	Equus_caballus
ENSODEG00000001937	-	81	97.087	ENSEEUG00000000436	SUB1	100	97.087	Erinaceus_europaeus
ENSODEG00000001937	-	100	99.213	ENSFCAG00000037288	SUB1	100	99.213	Felis_catus
ENSODEG00000001937	-	100	88.976	ENSFALG00000002143	SUB1	87	88.976	Ficedula_albicollis
ENSODEG00000001937	-	100	100.000	ENSFDAG00000017179	SUB1	100	100.000	Fukomys_damarensis
ENSODEG00000001937	-	100	85.827	ENSGALG00000034905	-	100	83.465	Gallus_gallus
ENSODEG00000001937	-	100	51.969	ENSGALG00000027147	-	100	52.756	Gallus_gallus
ENSODEG00000001937	-	100	89.764	ENSGALG00000003248	SUB1	100	89.764	Gallus_gallus
ENSODEG00000001937	-	100	71.654	ENSGACG00000003912	sub1b	100	66.929	Gasterosteus_aculeatus
ENSODEG00000001937	-	100	90.551	ENSGAGG00000013535	SUB1	100	90.551	Gopherus_agassizii
ENSODEG00000001937	-	100	100.000	ENSGGOG00000040900	SUB1	100	100.000	Gorilla_gorilla
ENSODEG00000001937	-	82	73.077	ENSHBUG00000013953	sub1b	77	73.077	Haplochromis_burtoni
ENSODEG00000001937	-	100	100.000	ENSHGLG00000006749	SUB1	100	100.000	Heterocephalus_glaber_female
ENSODEG00000001937	-	100	100.000	ENSHGLG00100014344	SUB1	100	100.000	Heterocephalus_glaber_male
ENSODEG00000001937	-	100	70.866	ENSHCOG00000001809	sub1b	100	65.354	Hippocampus_comes
ENSODEG00000001937	-	100	70.866	ENSIPUG00000008166	sub1	100	67.717	Ictalurus_punctatus
ENSODEG00000001937	-	100	73.643	ENSIPUG00000024367	SUB1	100	68.992	Ictalurus_punctatus
ENSODEG00000001937	-	100	99.213	ENSSTOG00000019364	SUB1	100	99.213	Ictidomys_tridecemlineatus
ENSODEG00000001937	-	100	91.339	ENSJJAG00000018885	Sub1	100	91.339	Jaculus_jaculus
ENSODEG00000001937	-	99	72.222	ENSLBEG00000010728	sub1b	100	69.291	Labrus_bergylta
ENSODEG00000001937	-	51	90.769	ENSLACG00000001068	SUB1	100	90.769	Latimeria_chalumnae
ENSODEG00000001937	-	100	77.165	ENSLOCG00000006692	sub1b	100	73.228	Lepisosteus_oculatus
ENSODEG00000001937	-	100	98.425	ENSLAFG00000032088	-	100	98.425	Loxodonta_africana
ENSODEG00000001937	-	100	98.425	ENSLAFG00000011006	-	100	98.425	Loxodonta_africana
ENSODEG00000001937	-	100	91.339	ENSMFAG00000045643	-	61	91.339	Macaca_fascicularis
ENSODEG00000001937	-	100	100.000	ENSMFAG00000040728	SUB1	100	100.000	Macaca_fascicularis
ENSODEG00000001937	-	100	100.000	ENSMMUG00000046181	SUB1	100	100.000	Macaca_mulatta
ENSODEG00000001937	-	100	100.000	ENSMNEG00000037046	SUB1	100	100.000	Macaca_nemestrina
ENSODEG00000001937	-	100	77.953	ENSMLEG00000043436	-	90	77.953	Mandrillus_leucophaeus
ENSODEG00000001937	-	100	97.638	ENSMLEG00000030509	-	94	97.638	Mandrillus_leucophaeus
ENSODEG00000001937	-	100	100.000	ENSMLEG00000037017	-	100	100.000	Mandrillus_leucophaeus
ENSODEG00000001937	-	100	70.866	ENSMAMG00000018428	sub1b	100	66.929	Mastacembelus_armatus
ENSODEG00000001937	-	100	72.441	ENSMZEG00005021252	sub1b	100	68.504	Maylandia_zebra
ENSODEG00000001937	-	100	89.764	ENSMGAG00000002906	SUB1	100	89.764	Meleagris_gallopavo
ENSODEG00000001937	-	100	49.606	ENSMGAG00000001200	-	95	49.606	Meleagris_gallopavo
ENSODEG00000001937	-	100	94.488	ENSMAUG00000020232	Sub1	100	94.488	Mesocricetus_auratus
ENSODEG00000001937	-	100	100.000	ENSMICG00000014535	SUB1	100	100.000	Microcebus_murinus
ENSODEG00000001937	-	100	93.701	ENSMOCG00000018930	-	100	93.701	Microtus_ochrogaster
ENSODEG00000001937	-	100	81.102	ENSMOCG00000016424	-	100	81.102	Microtus_ochrogaster
ENSODEG00000001937	-	100	82.857	ENSMODG00000020410	SUB1	100	80.714	Monodelphis_domestica
ENSODEG00000001937	-	100	72.441	ENSMALG00000007163	sub1b	81	74.016	Monopterus_albus
ENSODEG00000001937	-	100	94.488	MGP_CAROLIEiJ_G0019676	Sub1	100	94.488	Mus_caroli
ENSODEG00000001937	-	100	93.701	ENSMUSG00000022205	Sub1	100	93.701	Mus_musculus
ENSODEG00000001937	-	100	93.701	MGP_PahariEiJ_G0016056	Sub1	100	93.701	Mus_pahari
ENSODEG00000001937	-	100	93.701	MGP_SPRETEiJ_G0020573	Sub1	100	93.701	Mus_spretus
ENSODEG00000001937	-	100	98.425	ENSMPUG00000018418	-	100	98.425	Mustela_putorius_furo
ENSODEG00000001937	-	100	99.213	ENSMPUG00000015185	-	100	99.213	Mustela_putorius_furo
ENSODEG00000001937	-	100	92.913	ENSMLUG00000009236	-	95	92.913	Myotis_lucifugus
ENSODEG00000001937	-	100	98.425	ENSMLUG00000013685	-	95	98.425	Myotis_lucifugus
ENSODEG00000001937	-	100	92.126	ENSNGAG00000010782	-	84	92.126	Nannospalax_galili
ENSODEG00000001937	-	100	82.677	ENSNGAG00000017212	-	100	82.677	Nannospalax_galili
ENSODEG00000001937	-	100	95.276	ENSNGAG00000014072	-	100	95.276	Nannospalax_galili
ENSODEG00000001937	-	82	72.115	ENSNBRG00000008451	sub1b	84	72.115	Neolamprologus_brichardi
ENSODEG00000001937	-	100	99.213	ENSNLEG00000018383	-	95	99.213	Nomascus_leucogenys
ENSODEG00000001937	-	100	99.213	ENSNLEG00000036068	SUB1	100	99.213	Nomascus_leucogenys
ENSODEG00000001937	-	100	94.488	ENSNLEG00000035968	-	100	94.488	Nomascus_leucogenys
ENSODEG00000001937	-	100	90.551	ENSMEUG00000007770	SUB1	100	88.189	Notamacropus_eugenii
ENSODEG00000001937	-	100	96.850	ENSOPRG00000012887	SUB1	100	96.850	Ochotona_princeps
ENSODEG00000001937	-	100	91.339	ENSOANG00000002328	SUB1	95	91.339	Ornithorhynchus_anatinus
ENSODEG00000001937	-	100	96.850	ENSOCUG00000006262	SUB1	60	96.850	Oryctolagus_cuniculus
ENSODEG00000001937	-	100	100.000	ENSOGAG00000009012	-	100	100.000	Otolemur_garnettii
ENSODEG00000001937	-	98	99.194	ENSOGAG00000000337	-	100	99.194	Otolemur_garnettii
ENSODEG00000001937	-	100	100.000	ENSOARG00000012154	SUB1	100	100.000	Ovis_aries
ENSODEG00000001937	-	100	100.000	ENSPPAG00000011212	SUB1	100	100.000	Pan_paniscus
ENSODEG00000001937	-	100	99.213	ENSPPRG00000008557	SUB1	100	99.213	Panthera_pardus
ENSODEG00000001937	-	100	99.213	ENSPTIG00000009466	SUB1	100	99.213	Panthera_tigris_altaica
ENSODEG00000001937	-	100	100.000	ENSPTRG00000048895	SUB1	100	100.000	Pan_troglodytes
ENSODEG00000001937	-	100	93.701	ENSPTRG00000041644	-	100	93.701	Pan_troglodytes
ENSODEG00000001937	-	100	100.000	ENSPANG00000000339	-	97	100.000	Papio_anubis
ENSODEG00000001937	-	100	77.165	ENSPANG00000033272	-	90	77.165	Papio_anubis
ENSODEG00000001937	-	100	97.638	ENSPANG00000000672	-	91	97.638	Papio_anubis
ENSODEG00000001937	-	100	100.000	ENSPANG00000002644	-	95	100.000	Papio_anubis
ENSODEG00000001937	-	100	93.701	ENSPANG00000035601	-	100	93.701	Papio_anubis
ENSODEG00000001937	-	100	75.591	ENSPKIG00000016923	sub1b	100	70.079	Paramormyrops_kingsleyae
ENSODEG00000001937	-	100	91.339	ENSPSIG00000005731	SUB1	95	88.976	Pelodiscus_sinensis
ENSODEG00000001937	-	100	81.102	ENSPCIG00000020827	-	100	81.102	Phascolarctos_cinereus
ENSODEG00000001937	-	100	90.551	ENSPCIG00000020907	-	100	88.189	Phascolarctos_cinereus
ENSODEG00000001937	-	100	94.488	ENSPPYG00000018347	-	100	94.488	Pongo_abelii
ENSODEG00000001937	-	100	100.000	ENSPPYG00000015379	SUB1	100	100.000	Pongo_abelii
ENSODEG00000001937	-	100	100.000	ENSPCOG00000014391	SUB1	100	100.000	Propithecus_coquereli
ENSODEG00000001937	-	100	99.213	ENSPVAG00000004785	SUB1	100	99.213	Pteropus_vampyrus
ENSODEG00000001937	-	100	72.441	ENSPNYG00000010975	sub1b	100	68.504	Pundamilia_nyererei
ENSODEG00000001937	-	99	77.778	ENSPNAG00000005998	sub1b	99	73.810	Pygocentrus_nattereri
ENSODEG00000001937	-	100	70.866	ENSPNAG00000008693	sub1a	100	71.654	Pygocentrus_nattereri
ENSODEG00000001937	-	100	93.701	ENSRNOG00000050563	Sub1	100	93.701	Rattus_norvegicus
ENSODEG00000001937	-	100	92.913	ENSRBIG00000031233	SUB1	100	92.913	Rhinopithecus_bieti
ENSODEG00000001937	-	100	100.000	ENSRROG00000040438	SUB1	100	100.000	Rhinopithecus_roxellana
ENSODEG00000001937	-	100	86.614	ENSRROG00000042718	-	90	86.614	Rhinopithecus_roxellana
ENSODEG00000001937	-	100	100.000	ENSSBOG00000026994	SUB1	100	100.000	Saimiri_boliviensis_boliviensis
ENSODEG00000001937	-	100	90.551	ENSSHAG00000014986	SUB1	100	88.189	Sarcophilus_harrisii
ENSODEG00000001937	-	100	76.378	ENSSFOG00015018386	sub1b	100	76.378	Scleropages_formosus
ENSODEG00000001937	-	100	74.803	ENSSFOG00015017283	sub1b	100	70.079	Scleropages_formosus
ENSODEG00000001937	-	100	72.441	ENSSMAG00000000313	sub1b	100	66.929	Scophthalmus_maximus
ENSODEG00000001937	-	100	73.228	ENSSDUG00000013854	sub1b	76	73.228	Seriola_dumerili
ENSODEG00000001937	-	100	73.228	ENSSLDG00000000852	sub1b	100	67.717	Seriola_lalandi_dorsalis
ENSODEG00000001937	-	100	89.764	ENSSPUG00000016817	SUB1	100	89.764	Sphenodon_punctatus
ENSODEG00000001937	-	100	73.228	ENSSPAG00000019363	sub1b	100	67.717	Stegastes_partitus
ENSODEG00000001937	-	100	100.000	ENSSSCG00000032650	-	100	100.000	Sus_scrofa
ENSODEG00000001937	-	100	100.000	ENSSSCG00000040294	-	87	100.000	Sus_scrofa
ENSODEG00000001937	-	100	87.402	ENSTGUG00000001918	SUB1	100	87.402	Taeniopygia_guttata
ENSODEG00000001937	-	100	70.866	ENSTRUG00000024420	sub1b	100	66.929	Takifugu_rubripes
ENSODEG00000001937	-	100	67.717	ENSTNIG00000002700	sub1b	100	66.929	Tetraodon_nigroviridis
ENSODEG00000001937	-	100	98.425	ENSTBEG00000004053	-	100	98.425	Tupaia_belangeri
ENSODEG00000001937	-	99	91.270	ENSTBEG00000015821	-	100	91.270	Tupaia_belangeri
ENSODEG00000001937	-	100	98.425	ENSTBEG00000006504	-	100	98.425	Tupaia_belangeri
ENSODEG00000001937	-	100	94.488	ENSTBEG00000001790	-	100	94.488	Tupaia_belangeri
ENSODEG00000001937	-	100	94.488	ENSTBEG00000012861	-	100	94.488	Tupaia_belangeri
ENSODEG00000001937	-	100	93.701	ENSTBEG00000011247	-	99	93.701	Tupaia_belangeri
ENSODEG00000001937	-	81	100.000	ENSTTRG00000017324	SUB1	100	100.000	Tursiops_truncatus
ENSODEG00000001937	-	100	99.213	ENSUAMG00000000182	SUB1	100	99.213	Ursus_americanus
ENSODEG00000001937	-	100	99.213	ENSUMAG00000013792	SUB1	100	99.213	Ursus_maritimus
ENSODEG00000001937	-	100	90.551	ENSVPAG00000011012	SUB1	100	90.551	Vicugna_pacos
ENSODEG00000001937	-	89	91.150	ENSVVUG00000025193	-	92	93.636	Vulpes_vulpes
ENSODEG00000001937	-	100	99.213	ENSVVUG00000022166	-	100	99.213	Vulpes_vulpes
ENSODEG00000001937	-	100	80.620	ENSXETG00000027218	sub1	100	79.070	Xenopus_tropicalis