EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000002224 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1426 bases
Position: chrJH651805.1:117715-119140
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000002898	RRM_1	PF00076.22	1.1e-27	1	2
ENSODEP00000002898	RRM_1	PF00076.22	1.1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000002962	-	1407	-	ENSODEP00000002898	468 (aa)	-	-

Gene Model

Click here to download ENSODEG00000002224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000002224	-	97	61.707	ENSODEG00000004982	-	99	62.309
ENSODEG00000002224	-	89	53.433	ENSODEG00000019012	-	92	51.653
ENSODEG00000002224	-	100	64.103	ENSODEG00000011878	-	100	63.675
ENSODEG00000002224	-	91	64.403	ENSODEG00000000530	-	90	64.598
ENSODEG00000002224	-	68	59.021	ENSODEG00000005485	SFPQ	51	61.246
ENSODEG00000002224	-	77	55.402	ENSODEG00000007817	-	91	46.170
ENSODEG00000002224	-	100	85.987	ENSODEG00000002994	-	100	85.654

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002224	-	100	92.781	ENSG00000147140	NONO	100	94.764	Homo_sapiens
ENSODEG00000002224	-	92	62.529	ENSAPOG00000023320	nono	83	69.972	Acanthochromis_polyacanthus
ENSODEG00000002224	-	100	93.617	ENSAMEG00000016057	NONO	100	93.617	Ailuropoda_melanoleuca
ENSODEG00000002224	-	79	70.933	ENSACIG00000019987	nono	82	71.901	Amphilophus_citrinellus
ENSODEG00000002224	-	92	61.609	ENSAOCG00000018863	nono	83	69.146	Amphiprion_ocellaris
ENSODEG00000002224	-	82	64.268	ENSAPEG00000011383	nono	87	70.423	Amphiprion_percula
ENSODEG00000002224	-	90	84.597	ENSAPLG00000002642	NONO	98	84.597	Anas_platyrhynchos
ENSODEG00000002224	-	100	79.787	ENSACAG00000015026	NONO	99	79.574	Anolis_carolinensis
ENSODEG00000002224	-	99	75.214	ENSANAG00000027089	-	99	75.427	Aotus_nancymaae
ENSODEG00000002224	-	99	65.880	ENSANAG00000035751	-	96	81.818	Aotus_nancymaae
ENSODEG00000002224	-	100	92.781	ENSANAG00000033266	-	100	92.781	Aotus_nancymaae
ENSODEG00000002224	-	72	73.761	ENSACLG00000012045	nono	91	73.761	Astatotilapia_calliptera
ENSODEG00000002224	-	100	61.311	ENSAMXG00000033933	nono	91	61.060	Astyanax_mexicanus
ENSODEG00000002224	-	100	93.404	ENSBTAG00000012152	NONO	100	93.404	Bos_taurus
ENSODEG00000002224	-	100	92.781	ENSCJAG00000036744	NONO	100	92.781	Callithrix_jacchus
ENSODEG00000002224	-	87	85.098	ENSCAFG00000013766	-	91	89.423	Canis_familiaris
ENSODEG00000002224	-	90	82.588	ENSCAFG00000030809	-	99	81.647	Canis_familiaris
ENSODEG00000002224	-	100	93.617	ENSCAFG00000017071	NONO	100	93.617	Canis_familiaris
ENSODEG00000002224	-	100	92.340	ENSCAFG00000003207	-	100	92.340	Canis_familiaris
ENSODEG00000002224	-	100	90.851	ENSCAFG00020020298	-	100	90.851	Canis_lupus_dingo
ENSODEG00000002224	-	79	85.135	ENSCHIG00000009602	-	89	85.135	Capra_hircus
ENSODEG00000002224	-	100	93.404	ENSCHIG00000000365	-	100	93.404	Capra_hircus
ENSODEG00000002224	-	100	89.597	ENSTSYG00000007423	-	99	89.597	Carlito_syrichta
ENSODEG00000002224	-	99	82.766	ENSTSYG00000036306	-	100	82.766	Carlito_syrichta
ENSODEG00000002224	-	100	78.132	ENSTSYG00000034207	-	99	78.132	Carlito_syrichta
ENSODEG00000002224	-	100	87.137	ENSCAPG00000011616	-	100	87.344	Cavia_aperea
ENSODEG00000002224	-	76	75.775	ENSCAPG00000006522	-	84	75.775	Cavia_aperea
ENSODEG00000002224	-	100	68.376	ENSCAPG00000002723	-	100	67.308	Cavia_aperea
ENSODEG00000002224	-	99	69.677	ENSCAPG00000002354	-	96	67.742	Cavia_aperea
ENSODEG00000002224	-	100	87.010	ENSCPOG00000023605	-	100	86.186	Cavia_porcellus
ENSODEG00000002224	-	80	85.450	ENSCPOG00000036719	-	93	85.714	Cavia_porcellus
ENSODEG00000002224	-	100	84.468	ENSCPOG00000038668	-	100	83.191	Cavia_porcellus
ENSODEG00000002224	-	100	68.856	ENSCPOG00000026604	-	99	66.949	Cavia_porcellus
ENSODEG00000002224	-	100	89.834	ENSCPOG00000010263	-	100	90.249	Cavia_porcellus
ENSODEG00000002224	-	100	84.076	ENSCATG00000039509	NONO	100	84.076	Cercocebus_atys
ENSODEG00000002224	-	100	93.249	ENSCLAG00000003642	NONO	100	93.249	Chinchilla_lanigera
ENSODEG00000002224	-	100	80.585	ENSCPBG00000016659	NONO	100	80.793	Chrysemys_picta_bellii
ENSODEG00000002224	-	100	92.781	ENSCANG00000025310	NONO	100	92.781	Colobus_angolensis_palliatus
ENSODEG00000002224	-	100	91.949	ENSCGRG00001000065	Nono	100	91.949	Cricetulus_griseus_chok1gshd
ENSODEG00000002224	-	90	93.795	ENSCGRG00000004508	Nono	100	93.795	Cricetulus_griseus_crigri
ENSODEG00000002224	-	76	71.271	ENSCSEG00000008189	NONO	82	71.271	Cynoglossus_semilaevis
ENSODEG00000002224	-	76	71.350	ENSCSEG00000010708	nono	79	71.350	Cynoglossus_semilaevis
ENSODEG00000002224	-	81	67.358	ENSCVAG00000003978	nono	83	69.482	Cyprinodon_variegatus
ENSODEG00000002224	-	92	61.982	ENSDARG00000020482	nono	87	69.027	Danio_rerio
ENSODEG00000002224	-	64	67.785	ENSDNOG00000032215	-	100	67.785	Dasypus_novemcinctus
ENSODEG00000002224	-	53	81.522	ENSDNOG00000031430	-	99	81.111	Dasypus_novemcinctus
ENSODEG00000002224	-	100	91.880	ENSDORG00000009294	Nono	100	92.094	Dipodomys_ordii
ENSODEG00000002224	-	86	94.648	ENSETEG00000013823	NONO	86	94.648	Echinops_telfairi
ENSODEG00000002224	-	100	93.617	ENSECAG00000008502	NONO	100	93.617	Equus_caballus
ENSODEG00000002224	-	100	92.308	ENSEEUG00000014404	NONO	100	92.308	Erinaceus_europaeus
ENSODEG00000002224	-	100	62.055	ENSELUG00000001083	nono	79	73.088	Esox_lucius
ENSODEG00000002224	-	100	93.617	ENSFCAG00000043511	-	100	93.617	Felis_catus
ENSODEG00000002224	-	100	72.128	ENSFALG00000011765	NONO	100	71.702	Ficedula_albicollis
ENSODEG00000002224	-	100	77.101	ENSFDAG00000006143	-	100	76.891	Fukomys_damarensis
ENSODEG00000002224	-	100	93.830	ENSFDAG00000012809	-	100	93.830	Fukomys_damarensis
ENSODEG00000002224	-	76	69.081	ENSFHEG00000009714	nono	85	68.595	Fundulus_heteroclitus
ENSODEG00000002224	-	100	80.167	ENSGALG00000005507	NONO	100	80.585	Gallus_gallus
ENSODEG00000002224	-	77	70.604	ENSGAFG00000011460	nono	83	70.523	Gambusia_affinis
ENSODEG00000002224	-	79	69.333	ENSGACG00000011824	nono	94	62.759	Gasterosteus_aculeatus
ENSODEG00000002224	-	100	82.340	ENSGAGG00000025400	-	91	82.553	Gopherus_agassizii
ENSODEG00000002224	-	91	92.757	ENSGGOG00000006194	NONO	97	92.757	Gorilla_gorilla
ENSODEG00000002224	-	100	82.265	ENSGGOG00000036327	-	99	82.692	Gorilla_gorilla
ENSODEG00000002224	-	79	71.200	ENSHBUG00000010741	nono	82	71.901	Haplochromis_burtoni
ENSODEG00000002224	-	100	92.357	ENSHGLG00000005550	NONO	100	92.994	Heterocephalus_glaber_female
ENSODEG00000002224	-	100	92.357	ENSHGLG00100013511	NONO	100	92.994	Heterocephalus_glaber_male
ENSODEG00000002224	-	90	64.720	ENSHCOG00000016441	nono	82	73.988	Hippocampus_comes
ENSODEG00000002224	-	84	66.667	ENSIPUG00000018271	nono	93	59.909	Ictalurus_punctatus
ENSODEG00000002224	-	100	93.617	ENSSTOG00000015869	NONO	100	93.617	Ictidomys_tridecemlineatus
ENSODEG00000002224	-	100	74.786	ENSJJAG00000001971	-	100	73.718	Jaculus_jaculus
ENSODEG00000002224	-	100	92.553	ENSJJAG00000017151	-	100	91.702	Jaculus_jaculus
ENSODEG00000002224	-	89	63.571	ENSKMAG00000002798	nono	82	69.421	Kryptolebias_marmoratus
ENSODEG00000002224	-	79	70.509	ENSLBEG00000022623	nono	84	71.468	Labrus_bergylta
ENSODEG00000002224	-	81	74.674	ENSLACG00000000598	NONO	84	79.320	Latimeria_chalumnae
ENSODEG00000002224	-	100	64.990	ENSLOCG00000014739	nono	93	66.216	Lepisosteus_oculatus
ENSODEG00000002224	-	100	92.797	ENSLAFG00000013422	NONO	100	92.797	Loxodonta_africana
ENSODEG00000002224	-	100	92.781	ENSMFAG00000041557	NONO	100	92.781	Macaca_fascicularis
ENSODEG00000002224	-	82	94.764	ENSMMUG00000020481	NONO	100	94.764	Macaca_mulatta
ENSODEG00000002224	-	100	92.781	ENSMNEG00000009698	NONO	100	92.781	Macaca_nemestrina
ENSODEG00000002224	-	100	92.781	ENSMLEG00000042452	NONO	100	92.781	Mandrillus_leucophaeus
ENSODEG00000002224	-	75	72.599	ENSMAMG00000007314	nono	94	62.700	Mastacembelus_armatus
ENSODEG00000002224	-	72	73.761	ENSMZEG00005010199	nono	91	73.761	Maylandia_zebra
ENSODEG00000002224	-	90	84.834	ENSMGAG00000008869	NONO	98	84.834	Meleagris_gallopavo
ENSODEG00000002224	-	100	92.616	ENSMAUG00000016243	Nono	100	92.616	Mesocricetus_auratus
ENSODEG00000002224	-	100	92.553	ENSMICG00000000232	NONO	100	92.553	Microcebus_murinus
ENSODEG00000002224	-	100	79.915	ENSMOCG00000021293	-	100	79.830	Microtus_ochrogaster
ENSODEG00000002224	-	93	93.563	ENSMOCG00000005532	-	96	93.563	Microtus_ochrogaster
ENSODEG00000002224	-	100	74.786	ENSMOCG00000020099	-	95	74.786	Microtus_ochrogaster
ENSODEG00000002224	-	79	69.867	ENSMMOG00000015503	nono	76	70.380	Mola_mola
ENSODEG00000002224	-	93	87.529	ENSMODG00000004445	NONO	99	87.529	Monodelphis_domestica
ENSODEG00000002224	-	79	68.901	ENSMALG00000001310	nono	87	69.697	Monopterus_albus
ENSODEG00000002224	-	100	92.178	ENSMUSG00000031311	Nono	100	92.178	Mus_musculus
ENSODEG00000002224	-	100	92.211	MGP_PahariEiJ_G0031826	Nono	100	92.211	Mus_pahari
ENSODEG00000002224	-	100	93.617	ENSMPUG00000004937	NONO	100	93.617	Mustela_putorius_furo
ENSODEG00000002224	-	100	92.979	ENSMLUG00000002489	NONO	89	92.979	Myotis_lucifugus
ENSODEG00000002224	-	100	92.094	ENSNGAG00000010857	Nono	100	92.521	Nannospalax_galili
ENSODEG00000002224	-	79	71.467	ENSNBRG00000017083	nono	82	72.176	Neolamprologus_brichardi
ENSODEG00000002224	-	100	89.809	ENSNLEG00000001278	NONO	100	94.764	Nomascus_leucogenys
ENSODEG00000002224	-	100	78.132	ENSMEUG00000004294	NONO	100	78.556	Notamacropus_eugenii
ENSODEG00000002224	-	60	92.754	ENSOPRG00000001139	-	69	92.754	Ochotona_princeps
ENSODEG00000002224	-	79	71.200	ENSONIG00000020497	nono	82	71.901	Oreochromis_niloticus
ENSODEG00000002224	-	99	87.395	ENSOCUG00000021848	-	92	92.431	Oryctolagus_cuniculus
ENSODEG00000002224	-	99	58.658	ENSOCUG00000024801	-	97	58.658	Oryctolagus_cuniculus
ENSODEG00000002224	-	87	62.919	ENSORLG00000012801	nono	85	67.024	Oryzias_latipes
ENSODEG00000002224	-	74	70.809	ENSORLG00020003761	nono	78	70.809	Oryzias_latipes_hni
ENSODEG00000002224	-	87	62.919	ENSORLG00015018033	nono	85	67.024	Oryzias_latipes_hsok
ENSODEG00000002224	-	87	62.322	ENSOMEG00000012702	nono	82	70.000	Oryzias_melastigma
ENSODEG00000002224	-	100	92.569	ENSOGAG00000004834	NONO	100	92.994	Otolemur_garnettii
ENSODEG00000002224	-	100	93.191	ENSOARG00000016966	NONO	99	93.191	Ovis_aries
ENSODEG00000002224	-	100	92.781	ENSPPAG00000032487	NONO	100	92.781	Pan_paniscus
ENSODEG00000002224	-	100	83.547	ENSPPAG00000041394	-	99	83.974	Pan_paniscus
ENSODEG00000002224	-	100	93.617	ENSPPRG00000024537	-	100	93.617	Panthera_pardus
ENSODEG00000002224	-	100	93.404	ENSPTIG00000016068	-	100	93.404	Panthera_tigris_altaica
ENSODEG00000002224	-	100	92.781	ENSPTRG00000022010	NONO	100	92.781	Pan_troglodytes
ENSODEG00000002224	-	100	83.333	ENSPTRG00000051228	-	100	83.761	Pan_troglodytes
ENSODEG00000002224	-	100	92.781	ENSPANG00000013979	NONO	100	92.781	Papio_anubis
ENSODEG00000002224	-	100	67.220	ENSPANG00000035017	-	99	66.183	Papio_anubis
ENSODEG00000002224	-	90	65.647	ENSPKIG00000014500	nono	93	65.977	Paramormyrops_kingsleyae
ENSODEG00000002224	-	89	62.411	ENSPKIG00000019475	-	91	74.157	Paramormyrops_kingsleyae
ENSODEG00000002224	-	100	82.979	ENSPSIG00000010678	NONO	99	82.989	Pelodiscus_sinensis
ENSODEG00000002224	-	90	61.239	ENSPMGG00000023030	nono	82	69.421	Periophthalmus_magnuspinnatus
ENSODEG00000002224	-	100	92.161	ENSPEMG00000011150	Nono	100	92.161	Peromyscus_maniculatus_bairdii
ENSODEG00000002224	-	100	82.180	ENSPCIG00000026515	NONO	100	82.809	Phascolarctos_cinereus
ENSODEG00000002224	-	76	65.278	ENSPFOG00000016436	nono	82	65.014	Poecilia_formosa
ENSODEG00000002224	-	76	69.722	ENSPLAG00000017492	nono	82	69.421	Poecilia_latipinna
ENSODEG00000002224	-	76	70.000	ENSPMEG00000021530	nono	83	69.697	Poecilia_mexicana
ENSODEG00000002224	-	84	66.414	ENSPREG00000010014	nono	82	70.248	Poecilia_reticulata
ENSODEG00000002224	-	100	92.357	ENSPPYG00000020451	NONO	100	92.357	Pongo_abelii
ENSODEG00000002224	-	100	91.789	ENSPCAG00000002541	NONO	100	92.632	Procavia_capensis
ENSODEG00000002224	-	100	93.617	ENSPCOG00000008197	NONO	100	93.617	Propithecus_coquereli
ENSODEG00000002224	-	100	92.553	ENSPVAG00000016503	NONO	100	91.702	Pteropus_vampyrus
ENSODEG00000002224	-	84	65.842	ENSPNAG00000008232	nono	82	59.725	Pygocentrus_nattereri
ENSODEG00000002224	-	100	91.387	ENSRNOG00000003689	Nono	100	91.387	Rattus_norvegicus
ENSODEG00000002224	-	78	94.809	ENSRBIG00000037966	NONO	100	94.809	Rhinopithecus_bieti
ENSODEG00000002224	-	100	92.569	ENSRROG00000043203	NONO	100	92.569	Rhinopithecus_roxellana
ENSODEG00000002224	-	100	89.809	ENSSBOG00000027683	-	99	89.809	Saimiri_boliviensis_boliviensis
ENSODEG00000002224	-	99	72.128	ENSSBOG00000018932	-	99	72.553	Saimiri_boliviensis_boliviensis
ENSODEG00000002224	-	100	92.781	ENSSBOG00000032772	-	100	92.781	Saimiri_boliviensis_boliviensis
ENSODEG00000002224	-	100	85.084	ENSSHAG00000010195	NONO	100	85.084	Sarcophilus_harrisii
ENSODEG00000002224	-	90	59.765	ENSSFOG00015000137	-	75	73.592	Scleropages_formosus
ENSODEG00000002224	-	100	62.474	ENSSFOG00015008964	nono	92	73.824	Scleropages_formosus
ENSODEG00000002224	-	92	62.329	ENSSDUG00000021886	nono	94	62.329	Seriola_dumerili
ENSODEG00000002224	-	92	62.329	ENSSLDG00000012392	nono	94	62.329	Seriola_lalandi_dorsalis
ENSODEG00000002224	-	100	85.897	ENSSARG00000007959	NONO	100	85.897	Sorex_araneus
ENSODEG00000002224	-	82	82.812	ENSSPUG00000003116	NONO	100	82.812	Sphenodon_punctatus
ENSODEG00000002224	-	92	62.529	ENSSPAG00000012663	nono	95	62.329	Stegastes_partitus
ENSODEG00000002224	-	100	93.617	ENSSSCG00000023245	NONO	100	93.617	Sus_scrofa
ENSODEG00000002224	-	100	81.529	ENSTGUG00000007048	NONO	100	81.104	Taeniopygia_guttata
ENSODEG00000002224	-	76	72.500	ENSTRUG00000005554	nono	83	71.858	Takifugu_rubripes
ENSODEG00000002224	-	100	93.617	ENSTTRG00000009605	NONO	100	93.617	Tursiops_truncatus
ENSODEG00000002224	-	100	90.851	ENSUAMG00000008220	NONO	100	90.851	Ursus_americanus
ENSODEG00000002224	-	100	93.617	ENSUMAG00000021550	NONO	100	93.617	Ursus_maritimus
ENSODEG00000002224	-	100	93.617	ENSVPAG00000002272	NONO	100	93.617	Vicugna_pacos
ENSODEG00000002224	-	100	89.218	ENSVVUG00000003390	-	100	89.218	Vulpes_vulpes
ENSODEG00000002224	-	100	72.281	ENSXETG00000020868	nono	99	72.281	Xenopus_tropicalis
ENSODEG00000002224	-	77	70.604	ENSXCOG00000015587	nono	83	70.523	Xiphophorus_couchianus
ENSODEG00000002224	-	77	70.604	ENSXMAG00000019883	nono	83	70.523	Xiphophorus_maculatus