EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000002359 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1243 bases
Position: chrJH651723.1:2152085-2153327
Accession: 101584628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003072	zf-RNPHF	PF08080.12	6.2e-18	1	1
ENSODEP00000003072	RRM_1	PF00076.22	1.4e-28	1	2
ENSODEP00000003072	RRM_1	PF00076.22	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003138	-	1227	XM_012517725	ENSODEP00000003072	408 (aa)	XP_012373179	-

Gene Model

Click here to download ENSODEG00000002359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002359's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000002359	-	99	92.961	ENSODEG00000019266	-	99	92.961
ENSODEG00000002359	-	88	39.835	ENSODEG00000001826	-	71	39.835
ENSODEG00000002359	-	89	57.104	ENSODEG00000007170	-	95	54.412
ENSODEG00000002359	-	89	34.973	ENSODEG00000010775	-	98	34.973
ENSODEG00000002359	-	88	54.770	ENSODEG00000004517	HNRNPH3	98	51.744
ENSODEG00000002359	-	96	68.523	ENSODEG00000007058	-	96	68.531
ENSODEG00000002359	-	96	67.386	ENSODEG00000001195	-	96	67.436
ENSODEG00000002359	-	88	34.530	ENSODEG00000004897	-	92	34.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002359	-	99	90.777	ENSG00000169813	HNRNPF	99	92.784	Homo_sapiens
ENSODEG00000002359	-	99	91.019	ENSAMEG00000018983	HNRNPF	99	91.019	Ailuropoda_melanoleuca
ENSODEG00000002359	-	95	79.167	ENSANAG00000033452	-	87	79.167	Aotus_nancymaae
ENSODEG00000002359	-	99	89.216	ENSANAG00000033285	-	99	89.216	Aotus_nancymaae
ENSODEG00000002359	-	99	75.121	ENSBTAG00000020513	-	99	75.121	Bos_taurus
ENSODEG00000002359	-	99	90.534	ENSBTAG00000008853	HNRNPF	99	90.534	Bos_taurus
ENSODEG00000002359	-	99	90.777	ENSCJAG00000008291	HNRNPF	99	90.777	Callithrix_jacchus
ENSODEG00000002359	-	99	91.019	ENSCAFG00000007044	HNRNPF	99	91.019	Canis_familiaris
ENSODEG00000002359	-	98	68.137	ENSCHIG00000022971	-	99	68.137	Capra_hircus
ENSODEG00000002359	-	99	90.534	ENSCHIG00000006714	HNRNPF	99	90.534	Capra_hircus
ENSODEG00000002359	-	99	90.291	ENSTSYG00000030439	-	99	90.291	Carlito_syrichta
ENSODEG00000002359	-	99	77.616	ENSTSYG00000002112	-	99	77.616	Carlito_syrichta
ENSODEG00000002359	-	99	92.961	ENSCAPG00000011521	HNRNPF	99	92.961	Cavia_aperea
ENSODEG00000002359	-	99	92.961	ENSCPOG00000003678	HNRNPF	99	92.961	Cavia_porcellus
ENSODEG00000002359	-	99	90.534	ENSCCAG00000031457	-	99	90.534	Cebus_capucinus
ENSODEG00000002359	-	99	71.845	ENSCCAG00000028687	-	99	71.845	Cebus_capucinus
ENSODEG00000002359	-	99	92.961	ENSCLAG00000005161	HNRNPF	99	92.961	Chinchilla_lanigera
ENSODEG00000002359	-	99	89.563	ENSCANG00000003086	-	99	89.563	Colobus_angolensis_palliatus
ENSODEG00000002359	-	94	68.814	ENSCGRG00001016206	-	88	68.814	Cricetulus_griseus_chok1gshd
ENSODEG00000002359	-	99	91.748	ENSCGRG00001016276	Hnrnpf	99	91.748	Cricetulus_griseus_chok1gshd
ENSODEG00000002359	-	99	87.136	ENSDNOG00000030849	-	99	87.136	Dasypus_novemcinctus
ENSODEG00000002359	-	99	82.524	ENSDORG00000005431	-	99	82.524	Dipodomys_ordii
ENSODEG00000002359	-	99	87.621	ENSDORG00000024936	-	99	87.621	Dipodomys_ordii
ENSODEG00000002359	-	99	83.495	ENSDORG00000008260	-	99	83.495	Dipodomys_ordii
ENSODEG00000002359	-	99	90.291	ENSDORG00000024298	-	99	90.291	Dipodomys_ordii
ENSODEG00000002359	-	99	91.262	ENSEASG00005006903	HNRNPF	99	91.262	Equus_asinus_asinus
ENSODEG00000002359	-	98	90.585	ENSECAG00000003229	HNRNPF	98	90.585	Equus_caballus
ENSODEG00000002359	-	99	91.019	ENSFCAG00000028219	-	99	91.019	Felis_catus
ENSODEG00000002359	-	99	92.961	ENSFDAG00000011431	-	99	92.961	Fukomys_damarensis
ENSODEG00000002359	-	98	85.496	ENSFDAG00000007858	-	98	85.496	Fukomys_damarensis
ENSODEG00000002359	-	99	75.728	ENSFDAG00000015308	-	98	75.728	Fukomys_damarensis
ENSODEG00000002359	-	91	90.133	ENSGGOG00000010867	HNRNPF	93	90.133	Gorilla_gorilla
ENSODEG00000002359	-	99	88.835	ENSHGLG00000010276	-	99	88.835	Heterocephalus_glaber_female
ENSODEG00000002359	-	99	92.718	ENSHGLG00000000147	-	99	92.718	Heterocephalus_glaber_female
ENSODEG00000002359	-	98	89.628	ENSHGLG00000014139	-	97	89.628	Heterocephalus_glaber_female
ENSODEG00000002359	-	99	82.968	ENSHGLG00000017607	-	99	82.968	Heterocephalus_glaber_female
ENSODEG00000002359	-	99	88.592	ENSHGLG00100019558	-	99	88.592	Heterocephalus_glaber_male
ENSODEG00000002359	-	99	89.806	ENSHGLG00100019572	-	99	89.806	Heterocephalus_glaber_male
ENSODEG00000002359	-	95	83.245	ENSHGLG00100010905	-	97	83.245	Heterocephalus_glaber_male
ENSODEG00000002359	-	98	84.596	ENSHGLG00100019910	-	100	84.596	Heterocephalus_glaber_male
ENSODEG00000002359	-	98	91.832	ENSHGLG00100020825	-	100	91.832	Heterocephalus_glaber_male
ENSODEG00000002359	-	99	79.177	ENSSTOG00000023820	-	99	79.177	Ictidomys_tridecemlineatus
ENSODEG00000002359	-	99	82.567	ENSSTOG00000022853	-	99	82.567	Ictidomys_tridecemlineatus
ENSODEG00000002359	-	99	92.476	ENSSTOG00000025560	-	99	92.476	Ictidomys_tridecemlineatus
ENSODEG00000002359	-	98	87.027	ENSJJAG00000014334	-	98	87.027	Jaculus_jaculus
ENSODEG00000002359	-	99	76.456	ENSJJAG00000022288	-	99	76.456	Jaculus_jaculus
ENSODEG00000002359	-	99	59.756	ENSJJAG00000014424	-	99	59.756	Jaculus_jaculus
ENSODEG00000002359	-	99	81.796	ENSJJAG00000017385	-	99	81.796	Jaculus_jaculus
ENSODEG00000002359	-	99	69.175	ENSJJAG00000000554	-	99	69.175	Jaculus_jaculus
ENSODEG00000002359	-	100	88.378	ENSLAFG00000000424	HNRNPF	99	88.378	Loxodonta_africana
ENSODEG00000002359	-	99	90.777	ENSMFAG00000021184	HNRNPF	99	90.777	Macaca_fascicularis
ENSODEG00000002359	-	99	90.777	ENSMMUG00000020982	HNRNPF	99	90.777	Macaca_mulatta
ENSODEG00000002359	-	99	90.777	ENSMLEG00000023515	HNRNPF	99	90.777	Mandrillus_leucophaeus
ENSODEG00000002359	-	99	91.748	ENSMAUG00000007892	Hnrnpf	99	91.748	Mesocricetus_auratus
ENSODEG00000002359	-	99	75.306	ENSMICG00000043739	-	99	75.306	Microcebus_murinus
ENSODEG00000002359	-	99	75.962	ENSMICG00000044171	-	98	75.962	Microcebus_murinus
ENSODEG00000002359	-	99	90.534	ENSMOCG00000014915	Hnrnpf	99	90.534	Microtus_ochrogaster
ENSODEG00000002359	-	99	91.748	ENSMUSG00000042079	Hnrnpf	99	94.203	Mus_musculus
ENSODEG00000002359	-	99	90.534	MGP_PahariEiJ_G0026903	-	99	90.534	Mus_pahari
ENSODEG00000002359	-	98	91.206	ENSMPUG00000017283	HNRNPF	98	91.206	Mustela_putorius_furo
ENSODEG00000002359	-	99	89.104	ENSMLUG00000007261	HNRNPF	99	89.104	Myotis_lucifugus
ENSODEG00000002359	-	99	75.616	ENSNGAG00000014079	-	99	75.616	Nannospalax_galili
ENSODEG00000002359	-	99	91.262	ENSNGAG00000010409	-	99	91.262	Nannospalax_galili
ENSODEG00000002359	-	99	64.634	ENSNGAG00000009482	-	99	64.634	Nannospalax_galili
ENSODEG00000002359	-	99	90.777	ENSNLEG00000019098	HNRNPF	99	90.777	Nomascus_leucogenys
ENSODEG00000002359	-	99	86.165	ENSOCUG00000024604	-	99	86.165	Oryctolagus_cuniculus
ENSODEG00000002359	-	99	91.505	ENSOCUG00000024719	-	99	91.505	Oryctolagus_cuniculus
ENSODEG00000002359	-	99	84.988	ENSOGAG00000013734	-	99	84.988	Otolemur_garnettii
ENSODEG00000002359	-	99	86.893	ENSOGAG00000030480	-	99	86.893	Otolemur_garnettii
ENSODEG00000002359	-	99	75.854	ENSOARG00000016658	-	99	75.854	Ovis_aries
ENSODEG00000002359	-	98	88.342	ENSOARG00000003995	HNRNPF	96	88.342	Ovis_aries
ENSODEG00000002359	-	99	91.019	ENSPPRG00000021222	HNRNPF	99	91.019	Panthera_pardus
ENSODEG00000002359	-	99	91.019	ENSPTIG00000009644	HNRNPF	99	91.019	Panthera_tigris_altaica
ENSODEG00000002359	-	99	90.777	ENSPTRG00000002446	HNRNPF	99	90.777	Pan_troglodytes
ENSODEG00000002359	-	99	90.534	ENSPANG00000002212	HNRNPF	99	90.534	Papio_anubis
ENSODEG00000002359	-	99	90.777	ENSPPYG00000002212	HNRNPF	99	90.777	Pongo_abelii
ENSODEG00000002359	-	100	88.378	ENSPCAG00000013169	HNRNPF	99	88.378	Procavia_capensis
ENSODEG00000002359	-	99	90.291	ENSPVAG00000011646	HNRNPF	99	90.291	Pteropus_vampyrus
ENSODEG00000002359	-	99	91.748	ENSRNOG00000014562	Hnrnpf	99	91.748	Rattus_norvegicus
ENSODEG00000002359	-	99	90.777	ENSRROG00000001235	HNRNPF	99	90.777	Rhinopithecus_roxellana
ENSODEG00000002359	-	99	90.777	ENSSBOG00000018361	HNRNPF	99	90.777	Saimiri_boliviensis_boliviensis
ENSODEG00000002359	-	99	90.777	ENSSARG00000010059	HNRNPF	99	90.777	Sorex_araneus
ENSODEG00000002359	-	99	90.777	ENSSSCG00000010203	-	99	91.005	Sus_scrofa
ENSODEG00000002359	-	84	71.111	ENSSSCG00000024956	-	95	71.111	Sus_scrofa
ENSODEG00000002359	-	98	68.069	ENSTBEG00000016094	HNRNPF	99	68.069	Tupaia_belangeri
ENSODEG00000002359	-	99	91.019	ENSUAMG00000000455	HNRNPF	99	91.019	Ursus_americanus
ENSODEG00000002359	-	99	91.019	ENSUMAG00000016485	HNRNPF	99	91.019	Ursus_maritimus
ENSODEG00000002359	-	99	91.019	ENSVVUG00000021261	HNRNPF	99	91.019	Vulpes_vulpes