EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000002389 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 12531 bases
Position: chrJH651808.1:1473440-1485970
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003115	Brix	PF04427.18	1.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003181	-	753	-	ENSODEP00000003115	250 (aa)	-	-

Gene Model

Click here to download ENSODEG00000002389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000002389	-	100	55.807	ENSODEG00000010997	-	100	55.524
ENSODEG00000002389	-	76	78.512	ENSODEG00000019171	-	83	77.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002389	-	100	62.323	ENSG00000113460	BRIX1	100	61.756	Homo_sapiens
ENSODEG00000002389	-	75	61.925	ENSAPOG00000020334	bxdc2	69	61.925	Acanthochromis_polyacanthus
ENSODEG00000002389	-	100	63.456	ENSAMEG00000003295	BRIX1	100	62.606	Ailuropoda_melanoleuca
ENSODEG00000002389	-	68	62.162	ENSACIG00000017003	bxdc2	71	61.506	Amphilophus_citrinellus
ENSODEG00000002389	-	75	62.343	ENSAOCG00000000941	bxdc2	69	62.343	Amphiprion_ocellaris
ENSODEG00000002389	-	75	61.506	ENSAPEG00000017124	bxdc2	69	61.506	Amphiprion_percula
ENSODEG00000002389	-	77	59.836	ENSATEG00000016635	bxdc2	71	59.836	Anabas_testudineus
ENSODEG00000002389	-	76	59.836	ENSAPLG00000006647	BRIX1	82	59.836	Anas_platyrhynchos
ENSODEG00000002389	-	78	61.224	ENSACAG00000008586	BRIX1	69	61.224	Anolis_carolinensis
ENSODEG00000002389	-	98	59.384	ENSANAG00000022329	-	98	60.224	Aotus_nancymaae
ENSODEG00000002389	-	98	63.142	ENSANAG00000010505	-	98	61.934	Aotus_nancymaae
ENSODEG00000002389	-	75	61.088	ENSACLG00000005213	bxdc2	69	61.088	Astatotilapia_calliptera
ENSODEG00000002389	-	70	60.444	ENSAMXG00000043121	bxdc2	71	57.028	Astyanax_mexicanus
ENSODEG00000002389	-	100	61.756	ENSBTAG00000019211	BRIX1	100	61.190	Bos_taurus
ENSODEG00000002389	-	100	60.057	ENSCJAG00000007390	-	100	59.490	Callithrix_jacchus
ENSODEG00000002389	-	100	60.907	ENSCJAG00000018506	-	100	60.340	Callithrix_jacchus
ENSODEG00000002389	-	100	59.207	ENSCAFG00000018797	BRIX1	100	58.640	Canis_familiaris
ENSODEG00000002389	-	100	57.507	ENSCAFG00020016783	BRIX1	100	57.507	Canis_lupus_dingo
ENSODEG00000002389	-	100	63.081	ENSCHIG00000015024	BRIX1	100	63.081	Capra_hircus
ENSODEG00000002389	-	100	60.907	ENSTSYG00000002898	BRIX1	100	59.773	Carlito_syrichta
ENSODEG00000002389	-	72	73.913	ENSCAPG00000009776	BRIX1	90	73.913	Cavia_aperea
ENSODEG00000002389	-	100	65.156	ENSCPOG00000022064	BRIX1	100	64.306	Cavia_porcellus
ENSODEG00000002389	-	98	61.383	ENSCCAG00000033405	BRIX1	98	60.807	Cebus_capucinus
ENSODEG00000002389	-	98	63.324	ENSCATG00000037721	BRIX1	99	62.751	Cercocebus_atys
ENSODEG00000002389	-	99	67.236	ENSCLAG00000008124	BRIX1	99	66.667	Chinchilla_lanigera
ENSODEG00000002389	-	98	63.037	ENSCSAG00000017117	BRIX1	99	62.464	Chlorocebus_sabaeus
ENSODEG00000002389	-	98	56.627	ENSCHOG00000012227	-	100	56.024	Choloepus_hoffmanni
ENSODEG00000002389	-	100	62.323	ENSCHOG00000001790	-	100	61.756	Choloepus_hoffmanni
ENSODEG00000002389	-	99	48.000	ENSCPBG00000021309	BRIX1	71	60.081	Chrysemys_picta_bellii
ENSODEG00000002389	-	55	62.319	ENSCING00000001695	-	52	62.319	Ciona_intestinalis
ENSODEG00000002389	-	98	63.324	ENSCANG00000022969	BRIX1	97	62.751	Colobus_angolensis_palliatus
ENSODEG00000002389	-	100	60.907	ENSCGRG00001007932	Brix1	100	60.340	Cricetulus_griseus_chok1gshd
ENSODEG00000002389	-	100	60.907	ENSCGRG00000016743	Brix1	100	60.340	Cricetulus_griseus_crigri
ENSODEG00000002389	-	75	58.921	ENSCSEG00000019821	bxdc2	70	58.921	Cynoglossus_semilaevis
ENSODEG00000002389	-	75	59.833	ENSCVAG00000016942	bxdc2	69	59.833	Cyprinodon_variegatus
ENSODEG00000002389	-	100	62.323	ENSDNOG00000002878	BRIX1	100	61.756	Dasypus_novemcinctus
ENSODEG00000002389	-	100	60.907	ENSDORG00000009369	Brix1	100	60.340	Dipodomys_ordii
ENSODEG00000002389	-	99	58.286	ENSETEG00000017842	-	100	58.286	Echinops_telfairi
ENSODEG00000002389	-	100	53.541	ENSETEG00000017329	-	100	52.691	Echinops_telfairi
ENSODEG00000002389	-	100	62.040	ENSEASG00005014968	BRIX1	100	61.473	Equus_asinus_asinus
ENSODEG00000002389	-	100	62.040	ENSECAG00000000377	BRIX1	92	61.473	Equus_caballus
ENSODEG00000002389	-	100	55.172	ENSEEUG00000008350	BRIX1	100	54.598	Erinaceus_europaeus
ENSODEG00000002389	-	77	58.848	ENSELUG00000009050	bxdc2	68	58.848	Esox_lucius
ENSODEG00000002389	-	100	63.456	ENSFCAG00000042465	BRIX1	100	62.890	Felis_catus
ENSODEG00000002389	-	72	62.500	ENSFALG00000002106	BRIX1	67	61.224	Ficedula_albicollis
ENSODEG00000002389	-	100	64.589	ENSFDAG00000018960	BRIX1	100	64.023	Fukomys_damarensis
ENSODEG00000002389	-	75	60.251	ENSFHEG00000004488	bxdc2	69	60.251	Fundulus_heteroclitus
ENSODEG00000002389	-	68	59.729	ENSGMOG00000002425	bxdc2	77	59.729	Gadus_morhua
ENSODEG00000002389	-	72	62.931	ENSGALG00000003373	BRIX1	70	61.633	Gallus_gallus
ENSODEG00000002389	-	66	61.290	ENSGAFG00000011947	bxdc2	69	59.414	Gambusia_affinis
ENSODEG00000002389	-	56	85.000	ENSGACG00000016491	bxdc2	71	57.202	Gasterosteus_aculeatus
ENSODEG00000002389	-	88	50.926	ENSGAGG00000011959	BRIX1	71	62.903	Gopherus_agassizii
ENSODEG00000002389	-	100	62.606	ENSGGOG00000004225	BRIX1	100	62.040	Gorilla_gorilla
ENSODEG00000002389	-	75	61.088	ENSHBUG00000017923	bxdc2	69	61.088	Haplochromis_burtoni
ENSODEG00000002389	-	100	46.742	ENSHGLG00000000296	-	100	46.459	Heterocephalus_glaber_female
ENSODEG00000002389	-	93	55.102	ENSHGLG00000017782	-	70	67.943	Heterocephalus_glaber_female
ENSODEG00000002389	-	100	52.711	ENSHGLG00000002055	-	100	52.108	Heterocephalus_glaber_female
ENSODEG00000002389	-	100	63.456	ENSHGLG00000004566	BRIX1	100	62.890	Heterocephalus_glaber_female
ENSODEG00000002389	-	94	49.180	ENSHGLG00000010349	-	98	49.180	Heterocephalus_glaber_female
ENSODEG00000002389	-	90	48.780	ENSHGLG00100000909	-	81	48.547	Heterocephalus_glaber_male
ENSODEG00000002389	-	99	57.102	ENSHGLG00100000068	-	97	56.534	Heterocephalus_glaber_male
ENSODEG00000002389	-	100	63.739	ENSHGLG00100002204	-	100	63.173	Heterocephalus_glaber_male
ENSODEG00000002389	-	100	43.909	ENSHGLG00100001527	-	100	43.909	Heterocephalus_glaber_male
ENSODEG00000002389	-	56	87.857	ENSHCOG00000011674	bxdc2	69	60.251	Hippocampus_comes
ENSODEG00000002389	-	72	59.307	ENSIPUG00000015099	brix1	67	59.307	Ictalurus_punctatus
ENSODEG00000002389	-	100	61.756	ENSSTOG00000009600	BRIX1	100	61.190	Ictidomys_tridecemlineatus
ENSODEG00000002389	-	100	61.261	ENSJJAG00000004662	-	100	61.261	Jaculus_jaculus
ENSODEG00000002389	-	76	68.182	ENSJJAG00000001806	-	92	67.355	Jaculus_jaculus
ENSODEG00000002389	-	94	53.313	ENSJJAG00000009708	-	73	63.095	Jaculus_jaculus
ENSODEG00000002389	-	100	55.524	ENSJJAG00000001423	-	100	54.958	Jaculus_jaculus
ENSODEG00000002389	-	75	61.088	ENSKMAG00000014487	bxdc2	69	61.088	Kryptolebias_marmoratus
ENSODEG00000002389	-	75	56.904	ENSLBEG00000018123	bxdc2	70	56.904	Labrus_bergylta
ENSODEG00000002389	-	77	59.426	ENSLACG00000005971	BRIX1	71	59.426	Latimeria_chalumnae
ENSODEG00000002389	-	75	60.082	ENSLOCG00000011774	bxdc2	70	61.885	Lepisosteus_oculatus
ENSODEG00000002389	-	100	62.606	ENSLAFG00000007249	BRIX1	100	62.040	Loxodonta_africana
ENSODEG00000002389	-	98	63.610	ENSMFAG00000033107	BRIX1	99	63.037	Macaca_fascicularis
ENSODEG00000002389	-	98	63.610	ENSMMUG00000038794	BRIX1	99	63.037	Macaca_mulatta
ENSODEG00000002389	-	98	63.610	ENSMNEG00000039324	BRIX1	99	63.037	Macaca_nemestrina
ENSODEG00000002389	-	98	63.610	ENSMLEG00000041564	BRIX1	99	63.037	Mandrillus_leucophaeus
ENSODEG00000002389	-	78	58.537	ENSMAMG00000015004	bxdc2	71	58.537	Mastacembelus_armatus
ENSODEG00000002389	-	75	61.088	ENSMZEG00005019808	bxdc2	69	61.088	Maylandia_zebra
ENSODEG00000002389	-	55	57.143	ENSMGAG00000003156	BRIX1	98	55.941	Meleagris_gallopavo
ENSODEG00000002389	-	80	73.705	ENSMAUG00000014172	Brix1	84	73.705	Mesocricetus_auratus
ENSODEG00000002389	-	100	62.323	ENSMICG00000005672	BRIX1	100	61.756	Microcebus_murinus
ENSODEG00000002389	-	100	60.057	ENSMOCG00000018798	Brix1	100	59.490	Microtus_ochrogaster
ENSODEG00000002389	-	75	61.925	ENSMMOG00000000861	bxdc2	70	61.925	Mola_mola
ENSODEG00000002389	-	100	52.676	ENSMODG00000020386	BRIX1	71	64.286	Monodelphis_domestica
ENSODEG00000002389	-	93	56.338	ENSMALG00000020437	bxdc2	76	61.925	Monopterus_albus
ENSODEG00000002389	-	100	62.040	MGP_CAROLIEiJ_G0019665	Brix1	100	61.473	Mus_caroli
ENSODEG00000002389	-	100	62.040	ENSMUSG00000022247	Brix1	100	61.473	Mus_musculus
ENSODEG00000002389	-	100	62.040	MGP_SPRETEiJ_G0020562	Brix1	100	61.473	Mus_spretus
ENSODEG00000002389	-	100	62.040	ENSMPUG00000015137	BRIX1	100	61.473	Mustela_putorius_furo
ENSODEG00000002389	-	76	68.595	ENSMLUG00000029255	BRIX1	92	67.769	Myotis_lucifugus
ENSODEG00000002389	-	100	62.606	ENSNGAG00000021812	-	100	62.040	Nannospalax_galili
ENSODEG00000002389	-	97	61.561	ENSNGAG00000002585	-	100	60.983	Nannospalax_galili
ENSODEG00000002389	-	75	60.669	ENSNBRG00000008850	bxdc2	66	60.669	Neolamprologus_brichardi
ENSODEG00000002389	-	100	64.897	ENSNLEG00000032149	BRIX1	100	64.897	Nomascus_leucogenys
ENSODEG00000002389	-	100	53.239	ENSMEUG00000016482	BRIX1	100	54.085	Notamacropus_eugenii
ENSODEG00000002389	-	56	92.857	ENSOPRG00000012886	BRIX1	70	92.857	Ochotona_princeps
ENSODEG00000002389	-	75	61.506	ENSONIG00000007725	bxdc2	68	61.506	Oreochromis_niloticus
ENSODEG00000002389	-	76	63.900	ENSOANG00000014525	-	81	63.900	Ornithorhynchus_anatinus
ENSODEG00000002389	-	100	60.907	ENSOCUG00000014478	BRIX1	100	60.340	Oryctolagus_cuniculus
ENSODEG00000002389	-	79	60.081	ENSORLG00000005895	bxdc2	72	60.081	Oryzias_latipes
ENSODEG00000002389	-	79	60.081	ENSORLG00020005201	bxdc2	72	60.081	Oryzias_latipes_hni
ENSODEG00000002389	-	79	59.677	ENSORLG00015011685	bxdc2	72	59.677	Oryzias_latipes_hsok
ENSODEG00000002389	-	79	60.081	ENSOMEG00000007680	bxdc2	72	60.081	Oryzias_melastigma
ENSODEG00000002389	-	100	61.473	ENSOGAG00000014827	BRIX1	100	60.907	Otolemur_garnettii
ENSODEG00000002389	-	100	61.473	ENSOARG00000011539	BRIX1	100	60.907	Ovis_aries
ENSODEG00000002389	-	100	62.323	ENSPPAG00000038183	BRIX1	100	61.756	Pan_paniscus
ENSODEG00000002389	-	100	63.456	ENSPPRG00000023961	BRIX1	100	62.890	Panthera_pardus
ENSODEG00000002389	-	100	63.456	ENSPTIG00000006466	BRIX1	100	62.890	Panthera_tigris_altaica
ENSODEG00000002389	-	100	62.606	ENSPTRG00000016784	BRIX1	100	62.040	Pan_troglodytes
ENSODEG00000002389	-	97	63.584	ENSPANG00000016504	BRIX1	97	63.006	Papio_anubis
ENSODEG00000002389	-	66	60.829	ENSPKIG00000005920	bxdc2	60	58.130	Paramormyrops_kingsleyae
ENSODEG00000002389	-	78	61.633	ENSPSIG00000011219	BRIX1	89	61.633	Pelodiscus_sinensis
ENSODEG00000002389	-	95	43.750	ENSPMGG00000022988	bxdc2	67	55.607	Periophthalmus_magnuspinnatus
ENSODEG00000002389	-	100	61.473	ENSPEMG00000016920	Brix1	100	60.907	Peromyscus_maniculatus_bairdii
ENSODEG00000002389	-	80	65.339	ENSPCIG00000022778	BRIX1	71	65.079	Phascolarctos_cinereus
ENSODEG00000002389	-	75	59.414	ENSPFOG00000008577	bxdc2	57	59.414	Poecilia_formosa
ENSODEG00000002389	-	75	59.414	ENSPLAG00000006772	bxdc2	63	59.414	Poecilia_latipinna
ENSODEG00000002389	-	75	59.414	ENSPMEG00000020229	bxdc2	63	59.414	Poecilia_mexicana
ENSODEG00000002389	-	75	58.996	ENSPREG00000017461	bxdc2	64	58.996	Poecilia_reticulata
ENSODEG00000002389	-	100	62.606	ENSPPYG00000015390	BRIX1	100	62.606	Pongo_abelii
ENSODEG00000002389	-	54	58.824	ENSPCAG00000005158	-	100	57.754	Procavia_capensis
ENSODEG00000002389	-	100	62.323	ENSPCOG00000018281	-	100	61.756	Propithecus_coquereli
ENSODEG00000002389	-	77	54.008	ENSPCOG00000016748	-	67	54.008	Propithecus_coquereli
ENSODEG00000002389	-	79	74.194	ENSPVAG00000016925	BRIX1	83	74.194	Pteropus_vampyrus
ENSODEG00000002389	-	75	61.088	ENSPNYG00000007707	bxdc2	69	61.088	Pundamilia_nyererei
ENSODEG00000002389	-	69	60.538	ENSPNAG00000010431	bxdc2	71	56.627	Pygocentrus_nattereri
ENSODEG00000002389	-	100	60.907	ENSRNOG00000018021	Brix1	100	59.773	Rattus_norvegicus
ENSODEG00000002389	-	98	63.324	ENSRBIG00000042083	BRIX1	97	62.751	Rhinopithecus_bieti
ENSODEG00000002389	-	98	63.610	ENSRROG00000031228	BRIX1	97	63.037	Rhinopithecus_roxellana
ENSODEG00000002389	-	56	50.331	YOL077C	-	52	50.331	Saccharomyces_cerevisiae
ENSODEG00000002389	-	98	61.671	ENSSBOG00000033290	-	98	61.095	Saimiri_boliviensis_boliviensis
ENSODEG00000002389	-	98	61.095	ENSSBOG00000017845	-	98	60.519	Saimiri_boliviensis_boliviensis
ENSODEG00000002389	-	90	52.727	ENSSHAG00000010794	BRIX1	100	52.113	Sarcophilus_harrisii
ENSODEG00000002389	-	76	59.167	ENSSMAG00000005909	bxdc2	70	59.167	Scophthalmus_maximus
ENSODEG00000002389	-	75	62.343	ENSSDUG00000016234	bxdc2	69	62.343	Seriola_dumerili
ENSODEG00000002389	-	75	61.506	ENSSLDG00000007044	bxdc2	69	61.506	Seriola_lalandi_dorsalis
ENSODEG00000002389	-	100	57.660	ENSSARG00000009879	BRIX1	100	57.103	Sorex_araneus
ENSODEG00000002389	-	80	60.159	ENSSPUG00000019166	-	84	58.566	Sphenodon_punctatus
ENSODEG00000002389	-	80	58.000	ENSSPUG00000000011	-	72	58.000	Sphenodon_punctatus
ENSODEG00000002389	-	75	61.925	ENSSPAG00000006309	bxdc2	69	61.925	Stegastes_partitus
ENSODEG00000002389	-	100	63.739	ENSSSCG00000016827	BRIX1	99	63.173	Sus_scrofa
ENSODEG00000002389	-	72	62.069	ENSTGUG00000001961	BRIX1	70	60.816	Taeniopygia_guttata
ENSODEG00000002389	-	75	60.669	ENSTRUG00000011403	bxdc2	70	60.669	Takifugu_rubripes
ENSODEG00000002389	-	69	60.987	ENSTNIG00000007517	bxdc2	71	58.400	Tetraodon_nigroviridis
ENSODEG00000002389	-	80	67.729	ENSTBEG00000011652	BRIX1	84	67.729	Tupaia_belangeri
ENSODEG00000002389	-	100	62.323	ENSTTRG00000003262	BRIX1	100	61.756	Tursiops_truncatus
ENSODEG00000002389	-	100	55.043	ENSUAMG00000022481	BRIX1	100	55.331	Ursus_americanus
ENSODEG00000002389	-	100	63.456	ENSUMAG00000012900	BRIX1	100	62.890	Ursus_maritimus
ENSODEG00000002389	-	68	67.421	ENSVPAG00000010128	BRIX1	63	66.516	Vicugna_pacos
ENSODEG00000002389	-	100	54.108	ENSVVUG00000022099	BRIX1	100	53.541	Vulpes_vulpes
ENSODEG00000002389	-	78	61.224	ENSXETG00000000703	brix1	72	61.224	Xenopus_tropicalis
ENSODEG00000002389	-	75	59.833	ENSXCOG00000002461	bxdc2	69	59.833	Xiphophorus_couchianus
ENSODEG00000002389	-	75	59.833	ENSXMAG00000004284	bxdc2	60	59.833	Xiphophorus_maculatus