EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000002409 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 85362 bases
Position: chrJH651740.1:1594966-1680327
Accession: 101580852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003140	Exo_endo_phos	PF03372.23	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003206	-	4595	XM_004645343	ENSODEP00000003140	693 (aa)	XP_012373323	-

Gene Model

Click here to download ENSODEG00000002409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000002409	-	100	58.764	ENSODEG00000007709	SYNJ2	90	61.404

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002409	-	100	98.124	ENSG00000159082	SYNJ1	99	98.124	Homo_sapiens
ENSODEG00000002409	-	100	83.597	ENSAPOG00000002809	synj1	52	82.361	Acanthochromis_polyacanthus
ENSODEG00000002409	-	100	79.568	ENSACIG00000008857	synj1	53	78.873	Amphilophus_citrinellus
ENSODEG00000002409	-	100	83.022	ENSAOCG00000009835	synj1	54	83.022	Amphiprion_ocellaris
ENSODEG00000002409	-	100	90.870	ENSACAG00000003006	-	54	90.870	Anolis_carolinensis
ENSODEG00000002409	-	100	97.980	ENSANAG00000027325	SYNJ1	54	96.862	Aotus_nancymaae
ENSODEG00000002409	-	100	82.158	ENSACLG00000002255	synj1	53	80.939	Astatotilapia_calliptera
ENSODEG00000002409	-	100	97.258	ENSBTAG00000003063	SYNJ1	53	96.148	Bos_taurus
ENSODEG00000002409	-	100	98.124	ENSCJAG00000009187	SYNJ1	54	96.719	Callithrix_jacchus
ENSODEG00000002409	-	100	97.547	ENSCAFG00000009041	SYNJ1	55	96.398	Canis_familiaris
ENSODEG00000002409	-	100	97.835	ENSCAFG00020025776	SYNJ1	54	96.434	Canis_lupus_dingo
ENSODEG00000002409	-	100	97.835	ENSTSYG00000014541	SYNJ1	54	96.434	Carlito_syrichta
ENSODEG00000002409	-	100	98.557	ENSCPOG00000012182	SYNJ1	53	97.004	Cavia_porcellus
ENSODEG00000002409	-	100	97.835	ENSCCAG00000020825	SYNJ1	54	96.434	Cebus_capucinus
ENSODEG00000002409	-	100	98.268	ENSCATG00000033891	SYNJ1	55	98.268	Cercocebus_atys
ENSODEG00000002409	-	100	98.701	ENSCLAG00000009796	SYNJ1	100	98.701	Chinchilla_lanigera
ENSODEG00000002409	-	100	96.719	ENSCSAG00000009654	SYNJ1	53	96.719	Chlorocebus_sabaeus
ENSODEG00000002409	-	100	93.651	ENSCPBG00000006402	SYNJ1	56	93.651	Chrysemys_picta_bellii
ENSODEG00000002409	-	100	98.268	ENSCANG00000031359	SYNJ1	54	96.862	Colobus_angolensis_palliatus
ENSODEG00000002409	-	100	97.114	ENSCGRG00001010861	Synj1	53	95.720	Cricetulus_griseus_chok1gshd
ENSODEG00000002409	-	100	97.114	ENSCGRG00000015749	Synj1	100	97.114	Cricetulus_griseus_crigri
ENSODEG00000002409	-	100	80.939	ENSCSEG00000019614	synj1	55	80.939	Cynoglossus_semilaevis
ENSODEG00000002409	-	100	77.915	ENSCVAG00000019250	synj1	54	77.915	Cyprinodon_variegatus
ENSODEG00000002409	-	100	81.935	ENSDARG00000025011	synj1	54	81.935	Danio_rerio
ENSODEG00000002409	-	100	97.691	ENSDORG00000014735	-	100	97.691	Dipodomys_ordii
ENSODEG00000002409	-	100	97.980	ENSEASG00005006287	SYNJ1	71	95.382	Equus_asinus_asinus
ENSODEG00000002409	-	100	97.835	ENSECAG00000004829	SYNJ1	55	97.835	Equus_caballus
ENSODEG00000002409	-	100	81.727	ENSELUG00000009731	synj1	54	78.889	Esox_lucius
ENSODEG00000002409	-	100	97.547	ENSFCAG00000012498	SYNJ1	54	96.148	Felis_catus
ENSODEG00000002409	-	100	97.980	ENSFDAG00000016818	SYNJ1	100	97.980	Fukomys_damarensis
ENSODEG00000002409	-	93	79.116	ENSGMOG00000014852	synj1	51	79.116	Gadus_morhua
ENSODEG00000002409	-	98	75.867	ENSGACG00000020575	synj1	53	75.867	Gasterosteus_aculeatus
ENSODEG00000002409	-	100	93.795	ENSGAGG00000022523	SYNJ1	53	92.439	Gopherus_agassizii
ENSODEG00000002409	-	100	98.124	ENSGGOG00000015945	SYNJ1	55	98.124	Gorilla_gorilla
ENSODEG00000002409	-	100	80.939	ENSHBUG00000007774	synj1	53	80.939	Haplochromis_burtoni
ENSODEG00000002409	-	100	97.980	ENSHGLG00000006420	SYNJ1	100	97.980	Heterocephalus_glaber_female
ENSODEG00000002409	-	100	97.980	ENSHGLG00100012591	SYNJ1	100	97.980	Heterocephalus_glaber_male
ENSODEG00000002409	-	100	76.978	ENSHCOG00000012774	synj1	54	76.978	Hippocampus_comes
ENSODEG00000002409	-	100	97.835	ENSSTOG00000015806	SYNJ1	53	97.835	Ictidomys_tridecemlineatus
ENSODEG00000002409	-	100	82.158	ENSKMAG00000004221	synj1	61	82.158	Kryptolebias_marmoratus
ENSODEG00000002409	-	100	81.241	ENSLBEG00000015081	synj1	54	78.464	Labrus_bergylta
ENSODEG00000002409	-	94	98.162	ENSMFAG00000018883	SYNJ1	52	96.672	Macaca_fascicularis
ENSODEG00000002409	-	100	97.004	ENSMMUG00000004624	SYNJ1	53	97.004	Macaca_mulatta
ENSODEG00000002409	-	100	98.268	ENSMNEG00000040077	SYNJ1	50	96.862	Macaca_nemestrina
ENSODEG00000002409	-	100	98.268	ENSMLEG00000037029	SYNJ1	54	96.862	Mandrillus_leucophaeus
ENSODEG00000002409	-	100	82.158	ENSMZEG00005024358	synj1	53	81.223	Maylandia_zebra
ENSODEG00000002409	-	100	96.537	ENSMAUG00000009743	Synj1	100	96.537	Mesocricetus_auratus
ENSODEG00000002409	-	100	98.268	ENSMICG00000034953	SYNJ1	55	98.268	Microcebus_murinus
ENSODEG00000002409	-	100	81.135	ENSMMOG00000010203	synj1	55	81.135	Mola_mola
ENSODEG00000002409	-	100	86.305	ENSMODG00000021073	SYNJ1	53	86.305	Monodelphis_domestica
ENSODEG00000002409	-	100	96.825	MGP_CAROLIEiJ_G0020951	Synj1	100	96.825	Mus_caroli
ENSODEG00000002409	-	100	97.258	ENSMUSG00000022973	Synj1	100	97.258	Mus_musculus
ENSODEG00000002409	-	100	97.258	MGP_PahariEiJ_G0016656	Synj1	100	97.258	Mus_pahari
ENSODEG00000002409	-	100	97.547	MGP_SPRETEiJ_G0021857	Synj1	100	97.547	Mus_spretus
ENSODEG00000002409	-	94	94.334	ENSMLUG00000026584	-	97	94.334	Myotis_lucifugus
ENSODEG00000002409	-	100	97.691	ENSNGAG00000000453	Synj1	100	97.691	Nannospalax_galili
ENSODEG00000002409	-	100	82.302	ENSNBRG00000011936	synj1	54	79.334	Neolamprologus_brichardi
ENSODEG00000002409	-	100	81.223	ENSONIG00000004667	synj1	50	81.223	Oreochromis_niloticus
ENSODEG00000002409	-	100	81.583	ENSORLG00000004320	synj1	53	80.228	Oryzias_latipes
ENSODEG00000002409	-	100	78.094	ENSORLG00020011994	synj1	52	78.094	Oryzias_latipes_hni
ENSODEG00000002409	-	100	82.014	ENSOMEG00000014322	synj1	55	78.189	Oryzias_melastigma
ENSODEG00000002409	-	100	98.124	ENSPPAG00000026784	SYNJ1	54	96.719	Pan_paniscus
ENSODEG00000002409	-	100	97.691	ENSPPRG00000023469	SYNJ1	54	96.291	Panthera_pardus
ENSODEG00000002409	-	100	97.547	ENSPTIG00000007930	SYNJ1	54	96.148	Panthera_tigris_altaica
ENSODEG00000002409	-	100	98.124	ENSPTRG00000048135	-	55	98.124	Pan_troglodytes
ENSODEG00000002409	-	100	98.124	ENSPTRG00000023787	SYNJ1	55	98.124	Pan_troglodytes
ENSODEG00000002409	-	100	98.268	ENSPANG00000022531	SYNJ1	54	96.862	Papio_anubis
ENSODEG00000002409	-	100	83.741	ENSPKIG00000022603	synj1	57	83.741	Paramormyrops_kingsleyae
ENSODEG00000002409	-	100	82.158	ENSPMGG00000016831	synj1	51	78.326	Periophthalmus_magnuspinnatus
ENSODEG00000002409	-	100	97.114	ENSPEMG00000018767	Synj1	100	97.114	Peromyscus_maniculatus_bairdii
ENSODEG00000002409	-	100	64.124	ENSPMAG00000002887	synj1	53	64.124	Petromyzon_marinus
ENSODEG00000002409	-	100	92.929	ENSPCIG00000016372	SYNJ1	53	92.929	Phascolarctos_cinereus
ENSODEG00000002409	-	100	81.392	ENSPFOG00000016886	synj1	53	81.392	Poecilia_formosa
ENSODEG00000002409	-	100	82.302	ENSPLAG00000017559	synj1	54	79.334	Poecilia_latipinna
ENSODEG00000002409	-	100	82.158	ENSPREG00000012412	synj1	53	80.939	Poecilia_reticulata
ENSODEG00000002409	-	100	96.719	ENSPPYG00000011365	SYNJ1	50	96.719	Pongo_abelii
ENSODEG00000002409	-	100	82.158	ENSPNYG00000022989	synj1	54	80.429	Pundamilia_nyererei
ENSODEG00000002409	-	100	82.590	ENSPNAG00000021119	synj1	58	82.590	Pygocentrus_nattereri
ENSODEG00000002409	-	100	96.148	ENSRNOG00000002051	Synj1	54	95.863	Rattus_norvegicus
ENSODEG00000002409	-	100	98.268	ENSRBIG00000034477	SYNJ1	54	96.862	Rhinopithecus_bieti
ENSODEG00000002409	-	100	96.862	ENSRROG00000039256	SYNJ1	54	96.862	Rhinopithecus_roxellana
ENSODEG00000002409	-	100	98.268	ENSSBOG00000021001	SYNJ1	54	96.862	Saimiri_boliviensis_boliviensis
ENSODEG00000002409	-	100	82.014	ENSSMAG00000018066	synj1	54	78.189	Scophthalmus_maximus
ENSODEG00000002409	-	100	82.446	ENSSLDG00000021406	synj1	53	81.508	Seriola_lalandi_dorsalis
ENSODEG00000002409	-	100	82.878	ENSSPAG00000017029	synj1	53	79.012	Stegastes_partitus
ENSODEG00000002409	-	100	97.980	ENSSSCG00000012035	SYNJ1	54	96.576	Sus_scrofa
ENSODEG00000002409	-	100	81.439	ENSTRUG00000006907	synj1	54	80.512	Takifugu_rubripes
ENSODEG00000002409	-	100	76.718	ENSTNIG00000009940	synj1	54	76.611	Tetraodon_nigroviridis
ENSODEG00000002409	-	100	97.835	ENSUAMG00000018606	SYNJ1	73	96.978	Ursus_americanus
ENSODEG00000002409	-	100	97.835	ENSUMAG00000018419	SYNJ1	73	96.978	Ursus_maritimus
ENSODEG00000002409	-	100	97.980	ENSVVUG00000023125	SYNJ1	53	96.576	Vulpes_vulpes
ENSODEG00000002409	-	100	81.223	ENSXCOG00000011896	synj1	54	81.223	Xiphophorus_couchianus
ENSODEG00000002409	-	100	81.081	ENSXMAG00000017524	synj1	53	81.081	Xiphophorus_maculatus