EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000002513 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 911 bases
Position: chrJH651682.1:1414041-1414951
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003270	RRM_1	PF00076.22	4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003339	-	537	-	ENSODEP00000003270	178 (aa)	-	-

Gene Model

Click here to download ENSODEG00000002513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000002513	-	59	60.000	ENSODEG00000003850	-	72	63.636
ENSODEG00000002513	-	93	63.855	ENSODEG00000017258	-	85	65.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002513	-	79	68.047	ENSG00000205937	RNPS1	93	67.005	Homo_sapiens
ENSODEG00000002513	-	52	51.261	ENSAPOG00000017310	RNPS1	53	55.689	Acanthochromis_polyacanthus
ENSODEG00000002513	-	79	64.516	ENSAMEG00000017861	RNPS1	54	64.634	Ailuropoda_melanoleuca
ENSODEG00000002513	-	51	45.763	ENSACIG00000014367	-	58	50.932	Amphilophus_citrinellus
ENSODEG00000002513	-	53	51.240	ENSAOCG00000002404	RNPS1	60	55.689	Amphiprion_ocellaris
ENSODEG00000002513	-	53	51.240	ENSAPEG00000006497	RNPS1	58	55.689	Amphiprion_percula
ENSODEG00000002513	-	52	49.580	ENSATEG00000024267	RNPS1	60	54.491	Anabas_testudineus
ENSODEG00000002513	-	79	68.047	ENSANAG00000028802	RNPS1	93	67.005	Aotus_nancymaae
ENSODEG00000002513	-	52	47.899	ENSACLG00000025942	RNPS1	60	52.695	Astatotilapia_calliptera
ENSODEG00000002513	-	66	62.376	ENSBTAG00000009969	RNPS1	58	64.024	Bos_taurus
ENSODEG00000002513	-	58	51.515	ENSBTAG00000046336	-	65	42.932	Bos_taurus
ENSODEG00000002513	-	79	68.047	ENSCJAG00000014969	RNPS1	93	67.005	Callithrix_jacchus
ENSODEG00000002513	-	79	64.516	ENSCAFG00000019397	RNPS1	54	64.634	Canis_familiaris
ENSODEG00000002513	-	79	64.516	ENSCAFG00020026159	RNPS1	54	64.634	Canis_lupus_dingo
ENSODEG00000002513	-	79	68.047	ENSTSYG00000001629	RNPS1	93	67.005	Carlito_syrichta
ENSODEG00000002513	-	79	64.516	ENSCAPG00000007731	RNPS1	54	64.634	Cavia_aperea
ENSODEG00000002513	-	79	64.516	ENSCPOG00000002066	RNPS1	58	64.634	Cavia_porcellus
ENSODEG00000002513	-	79	68.047	ENSCCAG00000034480	RNPS1	93	67.005	Cebus_capucinus
ENSODEG00000002513	-	86	65.746	ENSCATG00000042361	-	87	65.746	Cercocebus_atys
ENSODEG00000002513	-	79	68.047	ENSCATG00000013756	RNPS1	93	67.005	Cercocebus_atys
ENSODEG00000002513	-	79	64.516	ENSCLAG00000015546	RNPS1	58	64.634	Chinchilla_lanigera
ENSODEG00000002513	-	60	64.179	ENSCSAG00000005219	-	54	62.963	Chlorocebus_sabaeus
ENSODEG00000002513	-	79	64.516	ENSCHOG00000004866	RNPS1	54	64.634	Choloepus_hoffmanni
ENSODEG00000002513	-	79	46.269	ENSCPBG00000000214	RNPS1	100	48.804	Chrysemys_picta_bellii
ENSODEG00000002513	-	79	68.047	ENSCANG00000041307	RNPS1	93	67.005	Colobus_angolensis_palliatus
ENSODEG00000002513	-	66	49.315	ENSCANG00000030189	-	93	55.330	Colobus_angolensis_palliatus
ENSODEG00000002513	-	79	64.516	ENSCGRG00001020431	Rnps1	58	64.634	Cricetulus_griseus_chok1gshd
ENSODEG00000002513	-	52	73.196	ENSCGRG00000010104	-	80	69.608	Cricetulus_griseus_crigri
ENSODEG00000002513	-	67	63.107	ENSCGRG00000014021	Rnps1	58	60.000	Cricetulus_griseus_crigri
ENSODEG00000002513	-	53	47.934	ENSCSEG00000015997	RNPS1	58	52.096	Cynoglossus_semilaevis
ENSODEG00000002513	-	79	64.516	ENSDNOG00000016081	RNPS1	54	64.634	Dasypus_novemcinctus
ENSODEG00000002513	-	79	64.516	ENSDORG00000001755	Rnps1	58	64.634	Dipodomys_ordii
ENSODEG00000002513	-	79	64.516	ENSEASG00005004862	RNPS1	54	64.634	Equus_asinus_asinus
ENSODEG00000002513	-	54	64.516	ENSEEUG00000005933	RNPS1	54	64.634	Erinaceus_europaeus
ENSODEG00000002513	-	57	42.537	ENSELUG00000015003	RNPS1	59	52.174	Esox_lucius
ENSODEG00000002513	-	79	68.047	ENSFCAG00000007690	RNPS1	93	67.005	Felis_catus
ENSODEG00000002513	-	54	59.677	ENSFALG00000004868	RNPS1	58	60.241	Ficedula_albicollis
ENSODEG00000002513	-	79	64.516	ENSFDAG00000003386	RNPS1	58	64.634	Fukomys_damarensis
ENSODEG00000002513	-	54	59.677	ENSGALG00000009288	RNPS1	58	60.241	Gallus_gallus
ENSODEG00000002513	-	52	49.580	ENSGACG00000011261	RNPS1	59	54.491	Gasterosteus_aculeatus
ENSODEG00000002513	-	54	59.677	ENSGAGG00000010452	RNPS1	54	60.241	Gopherus_agassizii
ENSODEG00000002513	-	69	68.000	ENSGGOG00000026421	-	93	64.322	Gorilla_gorilla
ENSODEG00000002513	-	79	68.047	ENSGGOG00000014275	RNPS1	93	67.005	Gorilla_gorilla
ENSODEG00000002513	-	52	47.899	ENSHBUG00000002494	RNPS1	60	52.695	Haplochromis_burtoni
ENSODEG00000002513	-	79	64.516	ENSHGLG00000013957	RNPS1	58	64.634	Heterocephalus_glaber_female
ENSODEG00000002513	-	79	62.722	ENSHGLG00100010622	-	93	60.204	Heterocephalus_glaber_male
ENSODEG00000002513	-	79	64.516	ENSHGLG00100003539	RNPS1	58	64.634	Heterocephalus_glaber_male
ENSODEG00000002513	-	69	63.333	ENSHGLG00100015267	-	55	63.399	Heterocephalus_glaber_male
ENSODEG00000002513	-	53	48.361	ENSHCOG00000002546	-	61	52.229	Hippocampus_comes
ENSODEG00000002513	-	79	63.934	ENSSTOG00000013200	RNPS1	61	63.576	Ictidomys_tridecemlineatus
ENSODEG00000002513	-	59	63.158	ENSJJAG00000000532	-	80	62.805	Jaculus_jaculus
ENSODEG00000002513	-	75	56.287	ENSJJAG00000010326	-	58	59.756	Jaculus_jaculus
ENSODEG00000002513	-	79	64.516	ENSJJAG00000015576	-	58	64.634	Jaculus_jaculus
ENSODEG00000002513	-	52	51.261	ENSKMAG00000009135	RNPS1	60	55.689	Kryptolebias_marmoratus
ENSODEG00000002513	-	79	64.516	ENSLAFG00000000728	RNPS1	52	64.634	Loxodonta_africana
ENSODEG00000002513	-	79	59.633	ENSMFAG00000044121	-	51	58.571	Macaca_fascicularis
ENSODEG00000002513	-	79	68.047	ENSMFAG00000042142	RNPS1	93	67.005	Macaca_fascicularis
ENSODEG00000002513	-	79	68.047	ENSMMUG00000019238	-	93	67.005	Macaca_mulatta
ENSODEG00000002513	-	62	61.594	ENSMMUG00000041726	-	53	62.667	Macaca_mulatta
ENSODEG00000002513	-	62	60.870	ENSMNEG00000024827	-	53	62.000	Macaca_nemestrina
ENSODEG00000002513	-	79	68.047	ENSMLEG00000036928	RNPS1	93	67.005	Mandrillus_leucophaeus
ENSODEG00000002513	-	52	48.739	ENSMAMG00000021609	-	60	53.892	Mastacembelus_armatus
ENSODEG00000002513	-	52	47.899	ENSMZEG00005012742	RNPS1	60	52.695	Maylandia_zebra
ENSODEG00000002513	-	79	68.047	ENSMICG00000031543	RNPS1	93	67.513	Microcebus_murinus
ENSODEG00000002513	-	79	64.516	ENSMOCG00000003429	Rnps1	58	64.634	Microtus_ochrogaster
ENSODEG00000002513	-	54	64.516	ENSMODG00000015891	RNPS1	54	64.634	Monodelphis_domestica
ENSODEG00000002513	-	52	47.899	ENSMALG00000016619	RNPS1	53	53.293	Monopterus_albus
ENSODEG00000002513	-	79	64.516	ENSMUSG00000034681	Rnps1	58	64.634	Mus_musculus
ENSODEG00000002513	-	54	64.516	MGP_PahariEiJ_G0023498	Rnps1	58	64.634	Mus_pahari
ENSODEG00000002513	-	79	64.516	MGP_SPRETEiJ_G0022092	Rnps1	58	64.634	Mus_spretus
ENSODEG00000002513	-	79	64.516	ENSMLUG00000016808	RNPS1	54	64.634	Myotis_lucifugus
ENSODEG00000002513	-	54	64.516	ENSNGAG00000023702	Rnps1	58	64.634	Nannospalax_galili
ENSODEG00000002513	-	51	47.458	ENSNBRG00000023437	RNPS1	59	52.174	Neolamprologus_brichardi
ENSODEG00000002513	-	84	66.292	ENSNLEG00000009243	RNPS1	100	66.292	Nomascus_leucogenys
ENSODEG00000002513	-	79	63.415	ENSOPRG00000016422	RNPS1	53	63.804	Ochotona_princeps
ENSODEG00000002513	-	76	48.485	ENSOCUG00000021516	-	66	48.750	Oryctolagus_cuniculus
ENSODEG00000002513	-	79	64.516	ENSOCUG00000004387	-	54	64.634	Oryctolagus_cuniculus
ENSODEG00000002513	-	76	48.485	ENSOCUG00000027449	-	68	48.750	Oryctolagus_cuniculus
ENSODEG00000002513	-	83	58.757	ENSPPAG00000011845	RNPS1	93	63.731	Pan_paniscus
ENSODEG00000002513	-	79	68.047	ENSPPRG00000011255	RNPS1	93	67.005	Panthera_pardus
ENSODEG00000002513	-	79	60.947	ENSPTIG00000015643	RNPS1	97	59.896	Panthera_tigris_altaica
ENSODEG00000002513	-	79	68.047	ENSPTRG00000031310	RNPS1	93	67.005	Pan_troglodytes
ENSODEG00000002513	-	79	68.047	ENSPANG00000015748	RNPS1	93	67.005	Papio_anubis
ENSODEG00000002513	-	54	59.677	ENSPSIG00000006048	RNPS1	54	60.241	Pelodiscus_sinensis
ENSODEG00000002513	-	51	48.305	ENSPMGG00000015888	-	59	54.037	Periophthalmus_magnuspinnatus
ENSODEG00000002513	-	79	64.516	ENSPEMG00000012797	Rnps1	58	64.634	Peromyscus_maniculatus_bairdii
ENSODEG00000002513	-	79	64.516	ENSPCIG00000025012	RNPS1	58	64.634	Phascolarctos_cinereus
ENSODEG00000002513	-	79	60.947	ENSPCIG00000016114	-	93	59.391	Phascolarctos_cinereus
ENSODEG00000002513	-	79	62.903	ENSPCAG00000004514	RNPS1	54	63.415	Procavia_capensis
ENSODEG00000002513	-	79	68.047	ENSPCOG00000005478	RNPS1	93	67.005	Propithecus_coquereli
ENSODEG00000002513	-	79	64.516	ENSPVAG00000005105	RNPS1	54	64.634	Pteropus_vampyrus
ENSODEG00000002513	-	52	47.899	ENSPNYG00000000585	RNPS1	60	52.695	Pundamilia_nyererei
ENSODEG00000002513	-	51	59.167	ENSRNOG00000027239	AABR07037800.1	50	61.745	Rattus_norvegicus
ENSODEG00000002513	-	79	64.516	ENSRNOG00000008703	Rnps1	54	64.634	Rattus_norvegicus
ENSODEG00000002513	-	54	64.516	ENSRBIG00000038965	-	58	64.634	Rhinopithecus_bieti
ENSODEG00000002513	-	58	63.478	ENSRBIG00000013248	-	96	60.976	Rhinopithecus_bieti
ENSODEG00000002513	-	79	68.047	ENSRROG00000041252	RNPS1	84	69.101	Rhinopithecus_roxellana
ENSODEG00000002513	-	79	68.047	ENSSBOG00000027927	RNPS1	93	67.005	Saimiri_boliviensis_boliviensis
ENSODEG00000002513	-	79	64.516	ENSSHAG00000016951	RNPS1	54	64.634	Sarcophilus_harrisii
ENSODEG00000002513	-	60	55.882	ENSSFOG00015022746	RNPS1	58	55.556	Scleropages_formosus
ENSODEG00000002513	-	53	49.593	ENSSMAG00000005367	-	89	53.247	Scophthalmus_maximus
ENSODEG00000002513	-	52	48.333	ENSSMAG00000016933	RNPS1	60	53.892	Scophthalmus_maximus
ENSODEG00000002513	-	52	47.899	ENSSDUG00000011453	RNPS1	60	53.293	Seriola_dumerili
ENSODEG00000002513	-	51	49.580	ENSSLDG00000021341	RNPS1	61	53.293	Seriola_lalandi_dorsalis
ENSODEG00000002513	-	54	59.677	ENSSPUG00000016588	RNPS1	54	60.241	Sphenodon_punctatus
ENSODEG00000002513	-	52	51.261	ENSSPAG00000009383	RNPS1	60	55.689	Stegastes_partitus
ENSODEG00000002513	-	54	64.516	ENSSSCG00000008048	RNPS1	54	64.634	Sus_scrofa
ENSODEG00000002513	-	54	59.677	ENSTGUG00000003237	RNPS1	58	60.241	Taeniopygia_guttata
ENSODEG00000002513	-	52	47.899	ENSTRUG00000008602	RNPS1	59	53.293	Takifugu_rubripes
ENSODEG00000002513	-	51	50.420	ENSTNIG00000009753	RNPS1	59	52.941	Tetraodon_nigroviridis
ENSODEG00000002513	-	84	66.165	ENSTBEG00000009098	RNPS1	53	66.897	Tupaia_belangeri
ENSODEG00000002513	-	79	64.516	ENSTTRG00000008220	RNPS1	54	64.634	Tursiops_truncatus
ENSODEG00000002513	-	79	64.516	ENSUAMG00000004462	RNPS1	53	67.123	Ursus_americanus
ENSODEG00000002513	-	79	64.516	ENSUMAG00000022327	RNPS1	54	64.634	Ursus_maritimus
ENSODEG00000002513	-	76	58.654	ENSVPAG00000009976	RNPS1	54	52.727	Vicugna_pacos
ENSODEG00000002513	-	79	64.516	ENSVVUG00000009244	RNPS1	54	64.634	Vulpes_vulpes
ENSODEG00000002513	-	52	48.739	ENSXMAG00000004827	RNPS1	60	53.892	Xiphophorus_maculatus