EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000002594 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 24592 bases
Position: chrJH651656.1:6838668-6863259
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003380	MMR_HSR1	PF01926.23	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003451	-	846	-	ENSODEP00000003380	281 (aa)	-	-

Gene Model

Click here to download ENSODEG00000002594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000002594	-	63	30.387	ENSODEG00000007937	NRAS	90	30.387
ENSODEG00000002594	-	62	36.782	ENSODEG00000004150	-	81	36.782
ENSODEG00000002594	-	58	37.195	ENSODEG00000005942	RAB6A	76	37.195
ENSODEG00000002594	-	62	39.080	ENSODEG00000001343	RAB2B	78	39.080
ENSODEG00000002594	-	60	32.386	ENSODEG00000019004	RAB9A	83	32.386
ENSODEG00000002594	-	71	33.971	ENSODEG00000003860	RAB5B	90	33.971
ENSODEG00000002594	-	60	30.636	ENSODEG00000015703	HRAS	86	30.636
ENSODEG00000002594	-	70	32.020	ENSODEG00000000054	RAB22A	97	32.020
ENSODEG00000002594	-	71	37.313	ENSODEG00000003833	RAB30	95	37.313
ENSODEG00000002594	-	62	39.080	ENSODEG00000016788	-	85	39.080
ENSODEG00000002594	-	62	36.571	ENSODEG00000019065	-	88	36.571
ENSODEG00000002594	-	56	31.447	ENSODEG00000015650	-	66	31.447
ENSODEG00000002594	-	62	35.260	ENSODEG00000016056	RAB23	70	35.260
ENSODEG00000002594	-	61	39.080	ENSODEG00000000520	RAB39B	79	39.080
ENSODEG00000002594	-	62	31.818	ENSODEG00000009963	RHEB	91	31.818
ENSODEG00000002594	-	54	40.000	ENSODEG00000011726	RAB33A	63	40.000
ENSODEG00000002594	-	60	39.286	ENSODEG00000010443	-	80	39.286
ENSODEG00000002594	-	59	37.143	ENSODEG00000002979	RAB33B	72	37.143
ENSODEG00000002594	-	57	30.952	ENSODEG00000002835	RAB7A	98	30.952
ENSODEG00000002594	-	55	36.478	ENSODEG00000009016	RAB36	52	37.736
ENSODEG00000002594	-	62	37.143	ENSODEG00000017920	RAB5C	76	37.143
ENSODEG00000002594	-	60	31.609	ENSODEG00000009994	RERG	82	31.609
ENSODEG00000002594	-	60	32.370	ENSODEG00000010412	KRAS	87	32.370
ENSODEG00000002594	-	58	40.854	ENSODEG00000011248	-	81	40.476
ENSODEG00000002594	-	63	39.773	ENSODEG00000017847	-	85	39.773
ENSODEG00000002594	-	63	35.593	ENSODEG00000002013	RAB14	80	35.593
ENSODEG00000002594	-	60	38.372	ENSODEG00000006414	RAB12	83	36.170
ENSODEG00000002594	-	71	38.537	ENSODEG00000009908	RAB25	93	38.537
ENSODEG00000002594	-	65	41.530	ENSODEG00000013827	RAB15	83	41.530
ENSODEG00000002594	-	60	40.000	ENSODEG00000011371	RAB11B	75	40.000
ENSODEG00000002594	-	58	30.488	ENSODEG00000010425	RAB24	79	31.098
ENSODEG00000002594	-	71	35.407	ENSODEG00000016878	-	94	35.407
ENSODEG00000002594	-	71	36.408	ENSODEG00000007219	RAB35	97	34.466
ENSODEG00000002594	-	62	39.655	ENSODEG00000002369	-	79	39.655
ENSODEG00000002594	-	59	31.928	ENSODEG00000012270	RAB34	63	31.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002594	-	99	68.929	ENSTSYG00000006987	RASEF	53	68.929	Carlito_syrichta
ENSODEG00000002594	-	100	79.004	ENSCLAG00000004622	-	58	79.004	Chinchilla_lanigera
ENSODEG00000002594	-	99	65.714	ENSCGRG00000006455	Rasef	50	65.714	Cricetulus_griseus_crigri
ENSODEG00000002594	-	99	66.071	ENSDORG00000015570	Rasef	51	66.071	Dipodomys_ordii
ENSODEG00000002594	-	99	67.260	ENSEASG00005015967	RASEF	52	67.260	Equus_asinus_asinus
ENSODEG00000002594	-	99	67.260	ENSECAG00000000324	RASEF	52	67.260	Equus_caballus
ENSODEG00000002594	-	99	58.929	ENSGAGG00000007338	RASEF	52	58.929	Gopherus_agassizii
ENSODEG00000002594	-	99	63.799	ENSMOCG00000000943	Rasef	50	63.799	Microtus_ochrogaster
ENSODEG00000002594	-	99	61.786	MGP_CAROLIEiJ_G0026109	Rasef	50	61.786	Mus_caroli
ENSODEG00000002594	-	99	62.500	ENSMUSG00000043003	Rasef	50	62.500	Mus_musculus
ENSODEG00000002594	-	99	63.082	MGP_PahariEiJ_G0028447	Rasef	50	63.082	Mus_pahari
ENSODEG00000002594	-	99	61.786	MGP_SPRETEiJ_G0027075	Rasef	50	61.786	Mus_spretus
ENSODEG00000002594	-	99	66.904	ENSMPUG00000013070	RASEF	50	66.904	Mustela_putorius_furo
ENSODEG00000002594	-	99	65.000	ENSNGAG00000014878	Rasef	50	65.000	Nannospalax_galili
ENSODEG00000002594	-	99	68.327	ENSPTIG00000006676	RASEF	52	68.327	Panthera_tigris_altaica
ENSODEG00000002594	-	79	56.109	ENSPMGG00000015499	rasef	87	73.786	Periophthalmus_magnuspinnatus
ENSODEG00000002594	-	99	63.799	ENSPEMG00000002797	Rasef	50	63.799	Peromyscus_maniculatus_bairdii
ENSODEG00000002594	-	99	66.906	ENSVVUG00000029736	RASEF	52	66.906	Vulpes_vulpes