EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000002600 (Gene tree)
Gene ID: 101587772
Gene Symbol: -
Alias: -
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 31698 bases
Position: chrJH651682.1:3535399-3567096
Accession: 101587772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003389	KH_1	PF00013.29	1.6e-69	1	4
ENSODEP00000003389	KH_1	PF00013.29	1.6e-69	2	4
ENSODEP00000003389	KH_1	PF00013.29	1.6e-69	3	4
ENSODEP00000003389	KH_1	PF00013.29	1.6e-69	4	4
ENSODEP00000003388	KH_1	PF00013.29	6.4e-17	1	1
ENSODEP00000003389	KH_2	PF07650.17	1.7e-22	1	2
ENSODEP00000003389	KH_2	PF07650.17	1.7e-22	2	2
ENSODEP00000003388	KH_2	PF07650.17	2e-06	1	1
ENSODEP00000003389	DUF1897	PF09005.10	8.2e-12	1	2
ENSODEP00000003389	DUF1897	PF09005.10	8.2e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003460	-	2456	XM_004643169	ENSODEP00000003389	655 (aa)	XP_004643226	UPI000333BBF7
ENSODET00000003459	-	2692	-	ENSODEP00000003388	146 (aa)	-	-

Gene Model

Click here to download ENSODEG00000002600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000002600	-	52	30.657	ENSODEG00000011195	-	63	30.657
ENSODEG00000002600	-	92	51.455	ENSODEG00000015021	KHSRP	64	56.532
ENSODEG00000002600	-	58	34.524	ENSODEG00000018230	PCBP4	74	34.524
ENSODEG00000002600	-	50	40.625	ENSODEG00000012873	PCBP3	72	30.088
ENSODEG00000002600	-	100	69.178	ENSODEG00000003657	-	99	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002600	-	100	100.000	ENSG00000162613	FUBP1	100	99.237	Homo_sapiens
ENSODEG00000002600	-	100	70.270	ENSAPOG00000014845	fubp1	70	75.652	Acanthochromis_polyacanthus
ENSODEG00000002600	-	100	100.000	ENSAMEG00000007372	FUBP1	99	95.946	Ailuropoda_melanoleuca
ENSODEG00000002600	-	100	70.270	ENSACIG00000020024	fubp1	69	73.904	Amphilophus_citrinellus
ENSODEG00000002600	-	100	70.270	ENSAPEG00000012232	fubp1	72	76.638	Amphiprion_percula
ENSODEG00000002600	-	99	71.385	ENSATEG00000018619	fubp1	70	78.194	Anabas_testudineus
ENSODEG00000002600	-	100	95.918	ENSAPLG00000005965	FUBP1	100	97.347	Anas_platyrhynchos
ENSODEG00000002600	-	95	92.086	ENSACAG00000006310	FUBP1	96	87.427	Anolis_carolinensis
ENSODEG00000002600	-	100	70.270	ENSACLG00000006708	fubp1	72	77.753	Astatotilapia_calliptera
ENSODEG00000002600	-	100	78.912	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSODEG00000002600	-	100	100.000	ENSCJAG00000007062	FUBP1	100	99.084	Callithrix_jacchus
ENSODEG00000002600	-	100	100.000	ENSCAFG00000020361	FUBP1	99	99.378	Canis_familiaris
ENSODEG00000002600	-	100	99.315	ENSTSYG00000000148	FUBP1	100	99.024	Carlito_syrichta
ENSODEG00000002600	-	57	98.901	ENSCAPG00000011052	-	67	98.901	Cavia_aperea
ENSODEG00000002600	-	100	99.392	ENSCPOG00000002757	FUBP1	100	99.392	Cavia_porcellus
ENSODEG00000002600	-	100	98.496	ENSCCAG00000036537	FUBP1	100	84.682	Cebus_capucinus
ENSODEG00000002600	-	100	100.000	ENSCATG00000042126	FUBP1	100	99.084	Cercocebus_atys
ENSODEG00000002600	-	100	100.000	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSODEG00000002600	-	100	100.000	ENSCSAG00000001402	FUBP1	99	99.222	Chlorocebus_sabaeus
ENSODEG00000002600	-	100	99.389	ENSCHOG00000008177	FUBP1	100	99.389	Choloepus_hoffmanni
ENSODEG00000002600	-	100	100.000	ENSCGRG00001007103	Fubp1	100	98.176	Cricetulus_griseus_chok1gshd
ENSODEG00000002600	-	100	100.000	ENSCGRG00000003372	Fubp1	100	98.867	Cricetulus_griseus_crigri
ENSODEG00000002600	-	100	70.270	ENSCSEG00000021412	fubp1	70	76.522	Cynoglossus_semilaevis
ENSODEG00000002600	-	100	70.270	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSODEG00000002600	-	100	72.603	ENSDARG00000029248	fubp1	70	76.774	Danio_rerio
ENSODEG00000002600	-	67	71.795	ENSDNOG00000034565	-	82	72.500	Dasypus_novemcinctus
ENSODEG00000002600	-	100	99.315	ENSDORG00000016534	Fubp1	100	98.931	Dipodomys_ordii
ENSODEG00000002600	-	77	97.983	ENSETEG00000000948	-	62	97.983	Echinops_telfairi
ENSODEG00000002600	-	81	47.740	ENSEBUG00000016143	fubp1	64	58.462	Eptatretus_burgeri
ENSODEG00000002600	-	100	100.000	ENSEEUG00000001287	FUBP1	100	85.802	Erinaceus_europaeus
ENSODEG00000002600	-	100	76.190	ENSELUG00000007990	fubp1	70	74.298	Esox_lucius
ENSODEG00000002600	-	100	95.918	ENSFALG00000005768	FUBP1	98	95.969	Ficedula_albicollis
ENSODEG00000002600	-	100	100.000	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSODEG00000002600	-	100	70.270	ENSFHEG00000005230	fubp1	70	78.384	Fundulus_heteroclitus
ENSODEG00000002600	-	98	66.308	ENSGMOG00000003370	fubp1	70	69.518	Gadus_morhua
ENSODEG00000002600	-	100	95.918	ENSGALG00000008939	FUBP1	99	96.589	Gallus_gallus
ENSODEG00000002600	-	100	70.270	ENSGAFG00000020972	fubp1	91	77.098	Gambusia_affinis
ENSODEG00000002600	-	100	69.333	ENSGACG00000016563	fubp1	70	75.877	Gasterosteus_aculeatus
ENSODEG00000002600	-	100	70.270	ENSHBUG00000009835	fubp1	85	76.923	Haplochromis_burtoni
ENSODEG00000002600	-	100	100.000	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSODEG00000002600	-	86	93.600	ENSHGLG00000002808	-	72	91.447	Heterocephalus_glaber_female
ENSODEG00000002600	-	100	100.000	ENSHGLG00100003417	-	100	99.392	Heterocephalus_glaber_male
ENSODEG00000002600	-	86	93.600	ENSHGLG00100001414	-	72	92.105	Heterocephalus_glaber_male
ENSODEG00000002600	-	100	69.595	ENSHCOG00000000910	fubp1	70	74.735	Hippocampus_comes
ENSODEG00000002600	-	100	78.912	ENSIPUG00000009896	fubp1	70	76.840	Ictalurus_punctatus
ENSODEG00000002600	-	100	100.000	ENSSTOG00000014312	FUBP1	100	98.936	Ictidomys_tridecemlineatus
ENSODEG00000002600	-	100	100.000	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSODEG00000002600	-	100	70.270	ENSKMAG00000018897	fubp1	69	76.432	Kryptolebias_marmoratus
ENSODEG00000002600	-	100	69.595	ENSLBEG00000012700	fubp1	72	75.000	Labrus_bergylta
ENSODEG00000002600	-	96	81.560	ENSLOCG00000003745	fubp1	92	74.180	Lepisosteus_oculatus
ENSODEG00000002600	-	100	100.000	ENSLAFG00000003273	FUBP1	99	98.014	Loxodonta_africana
ENSODEG00000002600	-	100	100.000	ENSMFAG00000031825	FUBP1	100	99.084	Macaca_fascicularis
ENSODEG00000002600	-	100	100.000	ENSMMUG00000002899	FUBP1	100	99.084	Macaca_mulatta
ENSODEG00000002600	-	100	100.000	ENSMNEG00000045212	FUBP1	100	99.084	Macaca_nemestrina
ENSODEG00000002600	-	100	70.270	ENSMZEG00005024298	fubp1	70	78.384	Maylandia_zebra
ENSODEG00000002600	-	100	95.918	ENSMGAG00000009424	FUBP1	99	96.860	Meleagris_gallopavo
ENSODEG00000002600	-	100	99.315	ENSMAUG00000016428	Fubp1	100	98.328	Mesocricetus_auratus
ENSODEG00000002600	-	100	100.000	ENSMOCG00000014751	Fubp1	100	98.658	Microtus_ochrogaster
ENSODEG00000002600	-	100	68.919	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSODEG00000002600	-	100	86.747	ENSMODG00000020804	FUBP1	100	90.723	Monodelphis_domestica
ENSODEG00000002600	-	100	70.270	ENSMALG00000015173	fubp1	70	76.856	Monopterus_albus
ENSODEG00000002600	-	100	100.000	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.321	Mus_caroli
ENSODEG00000002600	-	100	99.315	ENSMUSG00000028034	Fubp1	100	98.015	Mus_musculus
ENSODEG00000002600	-	100	100.000	MGP_PahariEiJ_G0027191	Fubp1	100	98.473	Mus_pahari
ENSODEG00000002600	-	100	100.000	MGP_SPRETEiJ_G0026693	Fubp1	100	98.168	Mus_spretus
ENSODEG00000002600	-	100	98.630	ENSMLUG00000014802	FUBP1	99	95.067	Myotis_lucifugus
ENSODEG00000002600	-	100	100.000	ENSNGAG00000014302	Fubp1	98	100.000	Nannospalax_galili
ENSODEG00000002600	-	100	70.270	ENSNBRG00000015099	fubp1	72	77.753	Neolamprologus_brichardi
ENSODEG00000002600	-	100	100.000	ENSNLEG00000009772	FUBP1	100	95.434	Nomascus_leucogenys
ENSODEG00000002600	-	90	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSODEG00000002600	-	91	97.260	ENSOPRG00000001175	FUBP1	91	97.260	Ochotona_princeps
ENSODEG00000002600	-	100	70.270	ENSONIG00000018381	fubp1	69	78.384	Oreochromis_niloticus
ENSODEG00000002600	-	100	98.630	ENSOANG00000009777	FUBP1	99	92.231	Ornithorhynchus_anatinus
ENSODEG00000002600	-	98	68.896	ENSORLG00000003540	fubp1	71	77.753	Oryzias_latipes
ENSODEG00000002600	-	100	67.808	ENSORLG00020005908	fubp1	70	77.313	Oryzias_latipes_hni
ENSODEG00000002600	-	98	70.918	ENSORLG00015008779	fubp1	70	77.313	Oryzias_latipes_hsok
ENSODEG00000002600	-	98	70.497	ENSOMEG00000021943	fubp1	70	76.211	Oryzias_melastigma
ENSODEG00000002600	-	100	100.000	ENSOGAG00000014233	FUBP1	99	95.373	Otolemur_garnettii
ENSODEG00000002600	-	100	100.000	ENSOARG00000013259	FUBP1	99	95.928	Ovis_aries
ENSODEG00000002600	-	100	100.000	ENSPPRG00000000413	FUBP1	100	99.389	Panthera_pardus
ENSODEG00000002600	-	100	100.000	ENSPTIG00000019450	FUBP1	100	99.389	Panthera_tigris_altaica
ENSODEG00000002600	-	100	96.599	ENSPSIG00000012965	FUBP1	99	96.622	Pelodiscus_sinensis
ENSODEG00000002600	-	100	99.315	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSODEG00000002600	-	57	62.393	ENSPMAG00000001644	-	90	63.514	Petromyzon_marinus
ENSODEG00000002600	-	100	70.270	ENSPLAG00000021170	fubp1	72	78.384	Poecilia_latipinna
ENSODEG00000002600	-	98	72.713	ENSPMEG00000004747	fubp1	73	78.384	Poecilia_mexicana
ENSODEG00000002600	-	100	70.270	ENSPREG00000017911	fubp1	70	78.384	Poecilia_reticulata
ENSODEG00000002600	-	71	99.351	ENSPPYG00000001219	-	70	99.351	Pongo_abelii
ENSODEG00000002600	-	100	100.000	ENSPCAG00000012617	FUBP1	100	99.084	Procavia_capensis
ENSODEG00000002600	-	100	100.000	ENSPCOG00000024974	FUBP1	100	99.389	Propithecus_coquereli
ENSODEG00000002600	-	100	94.962	ENSPVAG00000014637	FUBP1	100	94.962	Pteropus_vampyrus
ENSODEG00000002600	-	100	70.270	ENSPNYG00000004552	fubp1	73	78.414	Pundamilia_nyererei
ENSODEG00000002600	-	100	79.592	ENSPNAG00000016207	fubp1	87	77.223	Pygocentrus_nattereri
ENSODEG00000002600	-	100	100.000	ENSRNOG00000043370	Fubp1	99	98.142	Rattus_norvegicus
ENSODEG00000002600	-	100	100.000	ENSRBIG00000042950	FUBP1	99	99.222	Rhinopithecus_bieti
ENSODEG00000002600	-	100	100.000	ENSRROG00000043534	FUBP1	99	99.222	Rhinopithecus_roxellana
ENSODEG00000002600	-	100	100.000	ENSSBOG00000027299	FUBP1	100	99.084	Saimiri_boliviensis_boliviensis
ENSODEG00000002600	-	100	98.630	ENSSHAG00000005367	FUBP1	100	97.415	Sarcophilus_harrisii
ENSODEG00000002600	-	100	77.551	ENSSFOG00015010213	fubp1	70	79.386	Scleropages_formosus
ENSODEG00000002600	-	100	70.270	ENSSDUG00000007383	fubp1	68	76.333	Seriola_dumerili
ENSODEG00000002600	-	100	70.270	ENSSLDG00000022863	fubp1	72	76.754	Seriola_lalandi_dorsalis
ENSODEG00000002600	-	100	97.133	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSODEG00000002600	-	98	88.554	ENSSPUG00000008389	FUBP1	99	86.384	Sphenodon_punctatus
ENSODEG00000002600	-	100	70.270	ENSSPAG00000010161	fubp1	69	77.533	Stegastes_partitus
ENSODEG00000002600	-	100	92.157	ENSTGUG00000006841	FUBP1	100	96.223	Taeniopygia_guttata
ENSODEG00000002600	-	100	69.863	ENSTRUG00000004615	fubp1	65	77.729	Takifugu_rubripes
ENSODEG00000002600	-	82	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSODEG00000002600	-	100	100.000	ENSTTRG00000000096	FUBP1	100	99.237	Tursiops_truncatus
ENSODEG00000002600	-	100	100.000	ENSVPAG00000004709	FUBP1	100	99.231	Vicugna_pacos
ENSODEG00000002600	-	98	68.615	ENSXCOG00000019354	fubp1	72	76.856	Xiphophorus_couchianus
ENSODEG00000002600	-	100	70.270	ENSXMAG00000007168	fubp1	73	78.166	Xiphophorus_maculatus