EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000002658 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1464 bases
Position: chrJH651649.1:2960797-2962260
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003466	RRM_1	PF00076.22	2.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003538	-	531	-	ENSODEP00000003466	176 (aa)	-	-

Gene Model

Click here to download ENSODEG00000002658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000002658	-	78	66.667	ENSODEG00000020016	-	63	77.439
ENSODEG00000002658	-	84	59.174	ENSODEG00000019549	-	97	65.238
ENSODEG00000002658	-	78	64.943	ENSODEG00000018739	-	63	75.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002658	-	84	77.011	ENSG00000188529	SRSF10	96	79.429	Homo_sapiens
ENSODEG00000002658	-	78	66.477	ENSAMEG00000009869	SRSF10	63	76.506	Ailuropoda_melanoleuca
ENSODEG00000002658	-	66	64.052	ENSAPLG00000005446	SRSF10	60	75.000	Anas_platyrhynchos
ENSODEG00000002658	-	78	65.143	ENSACAG00000005327	SRSF10	65	74.699	Anolis_carolinensis
ENSODEG00000002658	-	78	73.171	ENSANAG00000029200	-	65	74.390	Aotus_nancymaae
ENSODEG00000002658	-	84	62.573	ENSANAG00000033337	-	95	72.671	Aotus_nancymaae
ENSODEG00000002658	-	72	72.603	ENSANAG00000033569	-	84	83.673	Aotus_nancymaae
ENSODEG00000002658	-	80	64.804	ENSBTAG00000054307	-	51	79.808	Bos_taurus
ENSODEG00000002658	-	84	77.011	ENSBTAG00000008072	SRSF10	96	78.736	Bos_taurus
ENSODEG00000002658	-	78	75.000	ENSCJAG00000044116	SRSF10	63	78.049	Callithrix_jacchus
ENSODEG00000002658	-	78	71.341	ENSCJAG00000010608	-	88	65.244	Callithrix_jacchus
ENSODEG00000002658	-	78	72.436	ENSCJAG00000002933	-	89	75.641	Callithrix_jacchus
ENSODEG00000002658	-	74	72.611	ENSCAFG00000003095	-	61	74.051	Canis_familiaris
ENSODEG00000002658	-	78	67.052	ENSCAFG00020020795	-	61	75.610	Canis_lupus_dingo
ENSODEG00000002658	-	84	69.714	ENSCHIG00000000308	-	95	72.903	Capra_hircus
ENSODEG00000002658	-	84	75.301	ENSTSYG00000009439	-	94	77.914	Carlito_syrichta
ENSODEG00000002658	-	72	68.519	ENSCAPG00000014746	SRSF10	95	77.778	Cavia_aperea
ENSODEG00000002658	-	84	69.730	ENSCPOG00000034102	SRSF10	96	79.429	Cavia_porcellus
ENSODEG00000002658	-	71	64.000	ENSCCAG00000033919	-	81	56.707	Cebus_capucinus
ENSODEG00000002658	-	84	75.301	ENSCCAG00000022497	SRSF10	96	79.429	Cebus_capucinus
ENSODEG00000002658	-	84	75.000	ENSCCAG00000024936	-	95	75.000	Cebus_capucinus
ENSODEG00000002658	-	84	75.301	ENSCATG00000031598	SRSF10	96	79.429	Cercocebus_atys
ENSODEG00000002658	-	84	69.730	ENSCLAG00000015555	SRSF10	96	79.429	Chinchilla_lanigera
ENSODEG00000002658	-	51	79.808	ENSCHOG00000004836	-	72	79.808	Choloepus_hoffmanni
ENSODEG00000002658	-	77	67.052	ENSCHOG00000007773	-	100	77.301	Choloepus_hoffmanni
ENSODEG00000002658	-	78	68.000	ENSCPBG00000000469	SRSF10	63	76.506	Chrysemys_picta_bellii
ENSODEG00000002658	-	69	56.061	ENSCANG00000010607	-	56	51.852	Colobus_angolensis_palliatus
ENSODEG00000002658	-	51	79.808	ENSCANG00000037293	-	61	88.333	Colobus_angolensis_palliatus
ENSODEG00000002658	-	56	73.451	ENSCANG00000041113	-	63	71.341	Colobus_angolensis_palliatus
ENSODEG00000002658	-	72	72.917	ENSCANG00000042227	-	93	75.887	Colobus_angolensis_palliatus
ENSODEG00000002658	-	84	65.455	ENSCANG00000037461	-	95	64.497	Colobus_angolensis_palliatus
ENSODEG00000002658	-	84	69.730	ENSCGRG00001017946	Srsf10	96	79.429	Cricetulus_griseus_chok1gshd
ENSODEG00000002658	-	72	68.712	ENSCGRG00000011531	Srsf10	71	77.922	Cricetulus_griseus_crigri
ENSODEG00000002658	-	77	68.667	ENSDNOG00000048916	-	62	58.389	Dasypus_novemcinctus
ENSODEG00000002658	-	84	77.011	ENSDORG00000024574	Srsf10	96	79.310	Dipodomys_ordii
ENSODEG00000002658	-	78	66.667	ENSEASG00005004349	SRSF10	63	76.829	Equus_asinus_asinus
ENSODEG00000002658	-	78	67.816	ENSECAG00000023709	SRSF10	63	78.049	Equus_caballus
ENSODEG00000002658	-	78	67.816	ENSEEUG00000014286	SRSF10	63	76.364	Erinaceus_europaeus
ENSODEG00000002658	-	84	75.301	ENSFCAG00000045556	SRSF10	96	78.857	Felis_catus
ENSODEG00000002658	-	78	63.006	ENSFALG00000000505	SRSF10	63	77.439	Ficedula_albicollis
ENSODEG00000002658	-	78	67.630	ENSFDAG00000019418	SRSF10	62	76.220	Fukomys_damarensis
ENSODEG00000002658	-	72	61.268	ENSFDAG00000021316	-	60	60.563	Fukomys_damarensis
ENSODEG00000002658	-	64	63.309	ENSFDAG00000005977	-	52	67.089	Fukomys_damarensis
ENSODEG00000002658	-	78	63.006	ENSGALG00000004133	SRSF10	63	77.439	Gallus_gallus
ENSODEG00000002658	-	73	56.790	ENSGAFG00000014771	srsf10b	58	63.303	Gambusia_affinis
ENSODEG00000002658	-	78	68.000	ENSGAGG00000005357	SRSF10	63	76.506	Gopherus_agassizii
ENSODEG00000002658	-	84	75.301	ENSGGOG00000000392	SRSF10	96	79.429	Gorilla_gorilla
ENSODEG00000002658	-	71	64.539	ENSGGOG00000036220	-	59	62.411	Gorilla_gorilla
ENSODEG00000002658	-	82	63.125	ENSGGOG00000042323	-	100	60.127	Gorilla_gorilla
ENSODEG00000002658	-	75	60.759	ENSHGLG00000018327	-	63	54.430	Heterocephalus_glaber_female
ENSODEG00000002658	-	84	69.730	ENSHGLG00000010879	-	96	79.429	Heterocephalus_glaber_female
ENSODEG00000002658	-	78	67.630	ENSHGLG00100008152	-	62	76.220	Heterocephalus_glaber_male
ENSODEG00000002658	-	77	60.736	ENSHGLG00100011571	-	64	54.601	Heterocephalus_glaber_male
ENSODEG00000002658	-	84	77.011	ENSSTOG00000000956	SRSF10	96	79.310	Ictidomys_tridecemlineatus
ENSODEG00000002658	-	84	60.494	ENSJJAG00000023686	-	95	56.790	Jaculus_jaculus
ENSODEG00000002658	-	84	75.862	ENSJJAG00000014552	-	96	78.161	Jaculus_jaculus
ENSODEG00000002658	-	78	68.293	ENSJJAG00000012744	-	67	62.577	Jaculus_jaculus
ENSODEG00000002658	-	78	70.122	ENSJJAG00000021270	-	77	70.122	Jaculus_jaculus
ENSODEG00000002658	-	84	77.011	ENSJJAG00000009074	Srsf10	96	79.310	Jaculus_jaculus
ENSODEG00000002658	-	78	67.045	ENSLAFG00000026905	SRSF10	63	77.108	Loxodonta_africana
ENSODEG00000002658	-	84	75.301	ENSMFAG00000046011	SRSF10	90	82.258	Macaca_fascicularis
ENSODEG00000002658	-	84	73.494	ENSMMUG00000038562	-	96	77.714	Macaca_mulatta
ENSODEG00000002658	-	78	75.460	ENSMMUG00000013784	SRSF10	62	77.914	Macaca_mulatta
ENSODEG00000002658	-	84	75.301	ENSMNEG00000041500	SRSF10	96	79.429	Macaca_nemestrina
ENSODEG00000002658	-	84	75.301	ENSMLEG00000016013	SRSF10	94	77.914	Mandrillus_leucophaeus
ENSODEG00000002658	-	78	62.195	ENSMLEG00000033834	-	73	64.024	Mandrillus_leucophaeus
ENSODEG00000002658	-	66	64.052	ENSMGAG00000005772	SRSF10	60	75.000	Meleagris_gallopavo
ENSODEG00000002658	-	84	69.730	ENSMAUG00000019452	Srsf10	96	79.429	Mesocricetus_auratus
ENSODEG00000002658	-	85	69.892	ENSMICG00000017029	-	100	79.545	Microcebus_murinus
ENSODEG00000002658	-	57	62.602	ENSMICG00000037744	-	51	61.789	Microcebus_murinus
ENSODEG00000002658	-	84	75.301	ENSMICG00000047638	SRSF10	90	82.258	Microcebus_murinus
ENSODEG00000002658	-	78	67.630	ENSMOCG00000013656	Srsf10	62	76.220	Microtus_ochrogaster
ENSODEG00000002658	-	78	68.391	ENSMODG00000013020	-	80	76.970	Monodelphis_domestica
ENSODEG00000002658	-	51	65.049	ENSMALG00000017201	srsf10b	55	65.049	Monopterus_albus
ENSODEG00000002658	-	84	77.011	MGP_CAROLIEiJ_G0026645	Srsf10	96	79.429	Mus_caroli
ENSODEG00000002658	-	84	77.011	ENSMUSG00000028676	Srsf10	96	79.429	Mus_musculus
ENSODEG00000002658	-	52	80.189	MGP_PahariEiJ_G0028978	-	83	79.808	Mus_pahari
ENSODEG00000002658	-	84	77.011	MGP_SPRETEiJ_G0027625	-	96	79.429	Mus_spretus
ENSODEG00000002658	-	78	67.241	ENSMPUG00000015845	SRSF10	63	77.439	Mustela_putorius_furo
ENSODEG00000002658	-	78	67.045	ENSMLUG00000028520	SRSF10	63	77.108	Myotis_lucifugus
ENSODEG00000002658	-	78	67.816	ENSMLUG00000005293	-	65	78.049	Myotis_lucifugus
ENSODEG00000002658	-	84	77.011	ENSNGAG00000000067	Srsf10	96	79.310	Nannospalax_galili
ENSODEG00000002658	-	84	75.301	ENSNLEG00000027520	SRSF10	94	77.914	Nomascus_leucogenys
ENSODEG00000002658	-	78	67.816	ENSOPRG00000018613	SRSF10	63	78.049	Ochotona_princeps
ENSODEG00000002658	-	84	74.699	ENSOCUG00000021782	-	95	71.598	Oryctolagus_cuniculus
ENSODEG00000002658	-	84	75.301	ENSOCUG00000024013	-	95	72.189	Oryctolagus_cuniculus
ENSODEG00000002658	-	80	61.783	ENSOCUG00000028110	-	91	60.897	Oryctolagus_cuniculus
ENSODEG00000002658	-	78	74.390	ENSOARG00000002384	-	59	75.000	Ovis_aries
ENSODEG00000002658	-	78	64.943	ENSOARG00000000073	-	63	74.390	Ovis_aries
ENSODEG00000002658	-	51	75.000	ENSOARG00000015607	-	56	75.000	Ovis_aries
ENSODEG00000002658	-	66	65.584	ENSOARG00000006984	-	56	74.483	Ovis_aries
ENSODEG00000002658	-	82	72.667	ENSPPAG00000007053	-	100	71.333	Pan_paniscus
ENSODEG00000002658	-	84	75.301	ENSPPAG00000032557	SRSF10	96	79.429	Pan_paniscus
ENSODEG00000002658	-	84	75.301	ENSPPRG00000005806	SRSF10	96	78.857	Panthera_pardus
ENSODEG00000002658	-	78	65.143	ENSPPRG00000001945	-	62	73.494	Panthera_pardus
ENSODEG00000002658	-	84	74.699	ENSPTIG00000014137	SRSF10	96	78.286	Panthera_tigris_altaica
ENSODEG00000002658	-	73	60.000	ENSPTIG00000012013	-	77	71.333	Panthera_tigris_altaica
ENSODEG00000002658	-	82	69.620	ENSPTRG00000051779	-	100	68.354	Pan_troglodytes
ENSODEG00000002658	-	84	75.301	ENSPTRG00000044753	SRSF10	96	79.429	Pan_troglodytes
ENSODEG00000002658	-	84	75.301	ENSPANG00000021680	SRSF10	96	79.429	Papio_anubis
ENSODEG00000002658	-	66	65.789	ENSPSIG00000017849	SRSF10	59	75.524	Pelodiscus_sinensis
ENSODEG00000002658	-	71	58.228	ENSPREG00000008383	srsf10b	58	63.303	Poecilia_reticulata
ENSODEG00000002658	-	78	67.816	ENSPPYG00000001726	SRSF10	63	78.049	Pongo_abelii
ENSODEG00000002658	-	84	75.301	ENSPCOG00000022379	SRSF10	96	79.429	Propithecus_coquereli
ENSODEG00000002658	-	78	67.816	ENSPVAG00000013611	SRSF10	63	78.049	Pteropus_vampyrus
ENSODEG00000002658	-	78	67.816	ENSRNOG00000007992	Srsf10	100	78.049	Rattus_norvegicus
ENSODEG00000002658	-	84	75.301	ENSRBIG00000028456	SRSF10	96	79.429	Rhinopithecus_bieti
ENSODEG00000002658	-	78	70.122	ENSRBIG00000044085	-	76	71.951	Rhinopithecus_bieti
ENSODEG00000002658	-	78	70.122	ENSRROG00000036002	-	76	71.951	Rhinopithecus_roxellana
ENSODEG00000002658	-	84	75.301	ENSRROG00000043248	SRSF10	94	77.914	Rhinopithecus_roxellana
ENSODEG00000002658	-	74	69.620	ENSSBOG00000033963	-	58	71.338	Saimiri_boliviensis_boliviensis
ENSODEG00000002658	-	84	75.301	ENSSBOG00000019550	SRSF10	95	77.576	Saimiri_boliviensis_boliviensis
ENSODEG00000002658	-	78	67.816	ENSSSCG00000036293	SRSF10	90	82.258	Sus_scrofa
ENSODEG00000002658	-	77	63.584	ENSTGUG00000001178	-	100	73.171	Taeniopygia_guttata
ENSODEG00000002658	-	78	67.241	ENSTTRG00000016150	SRSF10	63	77.439	Tursiops_truncatus
ENSODEG00000002658	-	78	70.909	ENSUAMG00000026596	-	90	72.121	Ursus_americanus
ENSODEG00000002658	-	78	64.641	ENSUAMG00000011291	-	63	74.269	Ursus_americanus
ENSODEG00000002658	-	77	59.064	ENSVVUG00000026904	-	60	67.284	Vulpes_vulpes