EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000002718 (Gene tree)
Gene ID: 101592277
Gene Symbol: SCAF4
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 38679 bases
Position: chrJH651740.1:2575998-2614676
Accession: 101592277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003550	RRM_1	PF00076.22	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003624	SCAF4-201	3462	XM_012517865	ENSODEP00000003550	1153 (aa)	-	-

Gene Model

Click here to download ENSODEG00000002718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002718's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002718	SCAF4	100	89.060	ENSG00000156304	SCAF4	100	89.316	Homo_sapiens
ENSODEG00000002718	SCAF4	50	60.076	ENSAPOG00000019615	scaf4b	60	65.990	Acanthochromis_polyacanthus
ENSODEG00000002718	SCAF4	72	91.435	ENSAMEG00000014987	SCAF4	97	92.548	Ailuropoda_melanoleuca
ENSODEG00000002718	SCAF4	100	88.813	ENSANAG00000037494	SCAF4	100	88.728	Aotus_nancymaae
ENSODEG00000002718	SCAF4	93	47.285	ENSAMXG00000008585	scaf4a	60	65.157	Astyanax_mexicanus
ENSODEG00000002718	SCAF4	100	87.842	ENSBTAG00000018855	SCAF4	100	88.014	Bos_taurus
ENSODEG00000002718	SCAF4	100	88.747	ENSCJAG00000008993	SCAF4	100	88.832	Callithrix_jacchus
ENSODEG00000002718	SCAF4	99	89.369	ENSCAFG00000008863	SCAF4	99	89.455	Canis_familiaris
ENSODEG00000002718	SCAF4	99	87.164	ENSCAFG00020026019	SCAF4	100	88.395	Canis_lupus_dingo
ENSODEG00000002718	SCAF4	100	87.586	ENSCHIG00000008385	SCAF4	100	87.329	Capra_hircus
ENSODEG00000002718	SCAF4	92	90.187	ENSTSYG00000011344	SCAF4	83	90.101	Carlito_syrichta
ENSODEG00000002718	SCAF4	99	91.659	ENSCPOG00000012443	SCAF4	99	91.573	Cavia_porcellus
ENSODEG00000002718	SCAF4	100	88.879	ENSCCAG00000033727	SCAF4	98	91.636	Cebus_capucinus
ENSODEG00000002718	SCAF4	100	88.085	ENSCATG00000030379	SCAF4	100	89.406	Cercocebus_atys
ENSODEG00000002718	SCAF4	99	92.414	ENSCLAG00000006298	SCAF4	100	92.586	Chinchilla_lanigera
ENSODEG00000002718	SCAF4	100	88.662	ENSCSAG00000009438	SCAF4	100	89.173	Chlorocebus_sabaeus
ENSODEG00000002718	SCAF4	100	88.879	ENSCANG00000029847	SCAF4	100	89.307	Colobus_angolensis_palliatus
ENSODEG00000002718	SCAF4	99	83.306	ENSCGRG00001020821	Scaf4	99	82.149	Cricetulus_griseus_chok1gshd
ENSODEG00000002718	SCAF4	99	83.016	ENSCGRG00000014360	Scaf4	99	85.990	Cricetulus_griseus_crigri
ENSODEG00000002718	SCAF4	55	57.692	ENSCSEG00000012808	-	57	64.641	Cynoglossus_semilaevis
ENSODEG00000002718	SCAF4	100	85.592	ENSDNOG00000019014	SCAF4	94	85.849	Dasypus_novemcinctus
ENSODEG00000002718	SCAF4	96	76.178	ENSETEG00000000583	SCAF4	99	75.644	Echinops_telfairi
ENSODEG00000002718	SCAF4	100	89.374	ENSEASG00005007756	SCAF4	100	89.374	Equus_asinus_asinus
ENSODEG00000002718	SCAF4	100	89.460	ENSECAG00000014248	SCAF4	100	89.460	Equus_caballus
ENSODEG00000002718	SCAF4	56	50.347	ENSELUG00000002779	SCAF8	60	68.841	Esox_lucius
ENSODEG00000002718	SCAF4	100	88.946	ENSFCAG00000002228	SCAF4	100	89.203	Felis_catus
ENSODEG00000002718	SCAF4	99	92.261	ENSFDAG00000017780	SCAF4	100	92.261	Fukomys_damarensis
ENSODEG00000002718	SCAF4	91	85.314	ENSGGOG00000015557	SCAF4	100	87.629	Gorilla_gorilla
ENSODEG00000002718	SCAF4	99	93.357	ENSHGLG00000010582	SCAF4	99	93.269	Heterocephalus_glaber_female
ENSODEG00000002718	SCAF4	99	92.274	ENSHGLG00100009441	SCAF4	100	92.188	Heterocephalus_glaber_male
ENSODEG00000002718	SCAF4	70	54.412	ENSIPUG00000011285	scaf4	62	60.619	Ictalurus_punctatus
ENSODEG00000002718	SCAF4	99	85.965	ENSSTOG00000004450	SCAF4	100	86.140	Ictidomys_tridecemlineatus
ENSODEG00000002718	SCAF4	99	87.737	ENSJJAG00000019447	Scaf4	99	87.910	Jaculus_jaculus
ENSODEG00000002718	SCAF4	95	55.701	ENSLOCG00000009162	scaf4a	59	72.242	Lepisosteus_oculatus
ENSODEG00000002718	SCAF4	99	88.438	ENSLAFG00000010710	SCAF4	99	88.870	Loxodonta_africana
ENSODEG00000002718	SCAF4	100	88.285	ENSMFAG00000037668	SCAF4	100	88.370	Macaca_fascicularis
ENSODEG00000002718	SCAF4	100	88.285	ENSMMUG00000001712	SCAF4	100	88.370	Macaca_mulatta
ENSODEG00000002718	SCAF4	100	88.465	ENSMNEG00000032966	SCAF4	100	88.295	Macaca_nemestrina
ENSODEG00000002718	SCAF4	99	89.194	ENSMLEG00000039674	SCAF4	100	89.451	Mandrillus_leucophaeus
ENSODEG00000002718	SCAF4	99	86.297	ENSMAUG00000013307	Scaf4	100	85.516	Mesocricetus_auratus
ENSODEG00000002718	SCAF4	100	89.203	ENSMICG00000005256	SCAF4	100	89.289	Microcebus_murinus
ENSODEG00000002718	SCAF4	99	83.979	ENSMOCG00000012087	Scaf4	95	92.068	Microtus_ochrogaster
ENSODEG00000002718	SCAF4	100	80.427	ENSMODG00000021040	SCAF4	73	82.933	Monodelphis_domestica
ENSODEG00000002718	SCAF4	100	82.334	MGP_CAROLIEiJ_G0020944	Scaf4	95	89.859	Mus_caroli
ENSODEG00000002718	SCAF4	100	82.602	ENSMUSG00000022983	Scaf4	95	90.065	Mus_musculus
ENSODEG00000002718	SCAF4	100	80.983	MGP_PahariEiJ_G0016649	Scaf4	95	88.295	Mus_pahari
ENSODEG00000002718	SCAF4	99	88.518	ENSMPUG00000001078	SCAF4	99	88.260	Mustela_putorius_furo
ENSODEG00000002718	SCAF4	71	73.129	ENSMLUG00000011472	SCAF4	78	80.107	Myotis_lucifugus
ENSODEG00000002718	SCAF4	99	89.775	ENSNGAG00000005214	Scaf4	99	89.255	Nannospalax_galili
ENSODEG00000002718	SCAF4	100	89.060	ENSNLEG00000003569	SCAF4	100	89.316	Nomascus_leucogenys
ENSODEG00000002718	SCAF4	76	94.375	ENSOPRG00000007016	SCAF4	77	88.587	Ochotona_princeps
ENSODEG00000002718	SCAF4	100	85.094	ENSOCUG00000008336	SCAF4	100	85.009	Oryctolagus_cuniculus
ENSODEG00000002718	SCAF4	99	93.047	ENSOGAG00000014653	SCAF4	93	93.047	Otolemur_garnettii
ENSODEG00000002718	SCAF4	99	88.332	ENSOARG00000013894	SCAF4	98	87.941	Ovis_aries
ENSODEG00000002718	SCAF4	100	89.060	ENSPPAG00000028535	SCAF4	100	89.316	Pan_paniscus
ENSODEG00000002718	SCAF4	99	89.628	ENSPPRG00000000635	SCAF4	100	89.455	Panthera_pardus
ENSODEG00000002718	SCAF4	100	89.060	ENSPTRG00000013848	SCAF4	100	89.316	Pan_troglodytes
ENSODEG00000002718	SCAF4	100	88.540	ENSPANG00000017332	SCAF4	100	88.795	Papio_anubis
ENSODEG00000002718	SCAF4	65	60.334	ENSPKIG00000022408	scaf4a	86	60.247	Paramormyrops_kingsleyae
ENSODEG00000002718	SCAF4	99	74.249	ENSPSIG00000014242	SCAF4	57	86.909	Pelodiscus_sinensis
ENSODEG00000002718	SCAF4	61	81.894	ENSPCIG00000028183	SCAF4	67	80.435	Phascolarctos_cinereus
ENSODEG00000002718	SCAF4	100	88.898	ENSPPYG00000011355	SCAF4	100	89.974	Pongo_abelii
ENSODEG00000002718	SCAF4	92	86.786	ENSPCAG00000009998	SCAF4	93	86.926	Procavia_capensis
ENSODEG00000002718	SCAF4	100	89.003	ENSPCOG00000018710	SCAF4	100	88.917	Propithecus_coquereli
ENSODEG00000002718	SCAF4	100	87.746	ENSPVAG00000005220	SCAF4	100	87.575	Pteropus_vampyrus
ENSODEG00000002718	SCAF4	76	54.525	ENSPNAG00000016892	scaf4a	60	67.247	Pygocentrus_nattereri
ENSODEG00000002718	SCAF4	98	84.375	ENSRNOG00000002104	Scaf4	95	83.269	Rattus_norvegicus
ENSODEG00000002718	SCAF4	99	87.392	ENSRBIG00000040007	SCAF4	98	90.832	Rhinopithecus_bieti
ENSODEG00000002718	SCAF4	100	89.812	ENSRROG00000029488	SCAF4	100	89.726	Rhinopithecus_roxellana
ENSODEG00000002718	SCAF4	99	80.570	ENSSHAG00000001581	SCAF4	73	82.530	Sarcophilus_harrisii
ENSODEG00000002718	SCAF4	66	50.927	ENSSFOG00015006338	scaf4a	54	54.965	Scleropages_formosus
ENSODEG00000002718	SCAF4	63	59.608	ENSSMAG00000003738	scaf4b	50	78.417	Scophthalmus_maximus
ENSODEG00000002718	SCAF4	60	60.595	ENSSDUG00000012380	scaf4b	52	78.417	Seriola_dumerili
ENSODEG00000002718	SCAF4	100	85.132	ENSSARG00000009994	SCAF4	100	85.047	Sorex_araneus
ENSODEG00000002718	SCAF4	100	85.836	ENSSSCG00000021023	SCAF4	100	86.348	Sus_scrofa
ENSODEG00000002718	SCAF4	99	88.418	ENSTTRG00000010963	SCAF4	100	88.332	Tursiops_truncatus
ENSODEG00000002718	SCAF4	100	86.290	ENSUAMG00000008860	SCAF4	100	86.461	Ursus_americanus
ENSODEG00000002718	SCAF4	99	82.322	ENSUMAG00000016962	SCAF4	74	91.536	Ursus_maritimus
ENSODEG00000002718	SCAF4	99	89.332	ENSVVUG00000002953	SCAF4	100	89.419	Vulpes_vulpes