EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000002730 (Gene tree)
Gene ID: 101571998
Gene Symbol: NGDN
Alias: C14orf120|CANu1|DKFZP564O092|LCP5|NGD|lpd-2
Full Name: neuroguidin
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 10705 bases
Position: chrJH651791.1:2049943-2060647
Accession: 101571998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003563	Sas10_Utp3	PF04000.15	6.3e-12	1	1
ENSODEP00000003562	Sas10_Utp3	PF04000.15	6.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003636	NGDN-201	948	XM_004646685	ENSODEP00000003562	315 (aa)	XP_004646742	UPI0003336342
ENSODET00000003637	NGDN-202	1082	XM_023706936	ENSODEP00000003563	304 (aa)	XP_023562704	-

Gene Model

Click here to download ENSODEG00000002730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002730	NGDN	98	92.642	ENSG00000129460	NGDN	100	89.362	Homo_sapiens
ENSODEG00000002730	NGDN	84	56.977	ENSAPOG00000016411	ngdn	91	56.554	Acanthochromis_polyacanthus
ENSODEG00000002730	NGDN	93	92.254	ENSAMEG00000016660	NGDN	93	90.203	Ailuropoda_melanoleuca
ENSODEG00000002730	NGDN	90	55.797	ENSACIG00000021676	ngdn	88	55.516	Amphilophus_citrinellus
ENSODEG00000002730	NGDN	89	57.664	ENSAOCG00000015818	ngdn	90	56.944	Amphiprion_ocellaris
ENSODEG00000002730	NGDN	86	57.034	ENSAPEG00000009589	ngdn	92	56.618	Amphiprion_percula
ENSODEG00000002730	NGDN	100	54.072	ENSATEG00000020513	ngdn	89	55.944	Anabas_testudineus
ENSODEG00000002730	NGDN	94	69.686	ENSACAG00000007340	NGDN	87	69.123	Anolis_carolinensis
ENSODEG00000002730	NGDN	93	92.580	ENSANAG00000037066	NGDN	93	91.468	Aotus_nancymaae
ENSODEG00000002730	NGDN	93	56.294	ENSACLG00000016289	ngdn	90	55.709	Astatotilapia_calliptera
ENSODEG00000002730	NGDN	94	53.041	ENSAMXG00000000514	ngdn	94	54.138	Astyanax_mexicanus
ENSODEG00000002730	NGDN	93	92.933	ENSBTAG00000009595	NGDN	92	92.910	Bos_taurus
ENSODEG00000002730	NGDN	75	35.371	WBGene00003059	lpd-2	69	35.443	Caenorhabditis_elegans
ENSODEG00000002730	NGDN	100	92.105	ENSCJAG00000007530	NGDN	93	91.809	Callithrix_jacchus
ENSODEG00000002730	NGDN	93	91.873	ENSCAFG00000011631	NGDN	92	90.378	Canis_familiaris
ENSODEG00000002730	NGDN	93	91.873	ENSCAFG00020004943	NGDN	92	90.378	Canis_lupus_dingo
ENSODEG00000002730	NGDN	93	92.580	ENSCHIG00000015780	NGDN	93	91.126	Capra_hircus
ENSODEG00000002730	NGDN	100	92.105	ENSTSYG00000009606	NGDN	93	91.468	Carlito_syrichta
ENSODEG00000002730	NGDN	83	88.142	ENSCAPG00000014742	NGDN	94	88.142	Cavia_aperea
ENSODEG00000002730	NGDN	100	93.750	ENSCPOG00000008240	NGDN	96	93.750	Cavia_porcellus
ENSODEG00000002730	NGDN	93	92.933	ENSCCAG00000023047	NGDN	93	90.444	Cebus_capucinus
ENSODEG00000002730	NGDN	93	92.553	ENSCATG00000042790	NGDN	94	91.379	Cercocebus_atys
ENSODEG00000002730	NGDN	100	96.053	ENSCLAG00000012885	NGDN	96	96.053	Chinchilla_lanigera
ENSODEG00000002730	NGDN	93	92.199	ENSCSAG00000015952	NGDN	93	91.126	Chlorocebus_sabaeus
ENSODEG00000002730	NGDN	93	92.580	ENSCHOG00000009857	NGDN	94	91.809	Choloepus_hoffmanni
ENSODEG00000002730	NGDN	98	64.333	ENSCPBG00000025903	NGDN	69	65.263	Chrysemys_picta_bellii
ENSODEG00000002730	NGDN	93	92.199	ENSCANG00000031356	NGDN	93	90.785	Colobus_angolensis_palliatus
ENSODEG00000002730	NGDN	92	90.391	ENSCGRG00001024371	Ngdn	93	88.737	Cricetulus_griseus_chok1gshd
ENSODEG00000002730	NGDN	92	90.391	ENSCGRG00000018219	Ngdn	93	88.737	Cricetulus_griseus_crigri
ENSODEG00000002730	NGDN	90	56.522	ENSCSEG00000008801	ngdn	87	56.228	Cynoglossus_semilaevis
ENSODEG00000002730	NGDN	90	57.091	ENSDARG00000045372	ngdn	91	55.172	Danio_rerio
ENSODEG00000002730	NGDN	96	91.096	ENSDNOG00000005395	NGDN	93	89.761	Dasypus_novemcinctus
ENSODEG00000002730	NGDN	93	92.606	ENSDORG00000010731	Ngdn	93	91.724	Dipodomys_ordii
ENSODEG00000002730	NGDN	84	42.754	FBgn0031736	CG11030	89	42.230	Drosophila_melanogaster
ENSODEG00000002730	NGDN	93	83.451	ENSETEG00000007531	NGDN	94	81.911	Echinops_telfairi
ENSODEG00000002730	NGDN	93	46.667	ENSEBUG00000000664	ngdn	90	45.791	Eptatretus_burgeri
ENSODEG00000002730	NGDN	90	91.971	ENSEASG00005011793	NGDN	94	92.279	Equus_asinus_asinus
ENSODEG00000002730	NGDN	99	91.749	ENSECAG00000006081	NGDN	93	90.785	Equus_caballus
ENSODEG00000002730	NGDN	74	89.823	ENSEEUG00000011829	NGDN	100	87.764	Erinaceus_europaeus
ENSODEG00000002730	NGDN	100	54.397	ENSELUG00000022676	ngdn	87	53.156	Esox_lucius
ENSODEG00000002730	NGDN	99	91.419	ENSFCAG00000009093	NGDN	93	89.761	Felis_catus
ENSODEG00000002730	NGDN	93	94.700	ENSFDAG00000011611	NGDN	93	93.174	Fukomys_damarensis
ENSODEG00000002730	NGDN	91	57.651	ENSFHEG00000007207	ngdn	89	57.343	Fundulus_heteroclitus
ENSODEG00000002730	NGDN	90	55.636	ENSGMOG00000003876	ngdn	99	53.929	Gadus_morhua
ENSODEG00000002730	NGDN	91	57.295	ENSGAFG00000017102	ngdn	89	56.993	Gambusia_affinis
ENSODEG00000002730	NGDN	90	57.246	ENSGACG00000002164	ngdn	95	56.989	Gasterosteus_aculeatus
ENSODEG00000002730	NGDN	99	62.500	ENSGAGG00000016471	NGDN	90	62.950	Gopherus_agassizii
ENSODEG00000002730	NGDN	96	93.493	ENSGGOG00000005000	NGDN	93	92.491	Gorilla_gorilla
ENSODEG00000002730	NGDN	93	55.944	ENSHBUG00000019489	ngdn	90	55.363	Haplochromis_burtoni
ENSODEG00000002730	NGDN	93	94.700	ENSHGLG00000008896	NGDN	93	93.515	Heterocephalus_glaber_female
ENSODEG00000002730	NGDN	93	94.700	ENSHGLG00100014352	NGDN	93	93.515	Heterocephalus_glaber_male
ENSODEG00000002730	NGDN	92	54.770	ENSHCOG00000019913	ngdn	89	53.819	Hippocampus_comes
ENSODEG00000002730	NGDN	90	57.040	ENSIPUG00000008128	ngdn	88	56.383	Ictalurus_punctatus
ENSODEG00000002730	NGDN	93	94.366	ENSSTOG00000002637	NGDN	93	93.515	Ictidomys_tridecemlineatus
ENSODEG00000002730	NGDN	100	83.224	ENSJJAG00000010601	-	93	82.594	Jaculus_jaculus
ENSODEG00000002730	NGDN	93	57.544	ENSKMAG00000018719	ngdn	89	56.314	Kryptolebias_marmoratus
ENSODEG00000002730	NGDN	89	56.204	ENSLBEG00000027237	ngdn	92	56.250	Labrus_bergylta
ENSODEG00000002730	NGDN	88	59.341	ENSLACG00000005765	NGDN	91	60.440	Latimeria_chalumnae
ENSODEG00000002730	NGDN	93	94.346	ENSLAFG00000013953	NGDN	93	92.833	Loxodonta_africana
ENSODEG00000002730	NGDN	93	92.199	ENSMFAG00000033387	NGDN	93	91.126	Macaca_fascicularis
ENSODEG00000002730	NGDN	93	92.199	ENSMMUG00000014766	NGDN	93	91.126	Macaca_mulatta
ENSODEG00000002730	NGDN	93	91.844	ENSMNEG00000038334	NGDN	94	90.690	Macaca_nemestrina
ENSODEG00000002730	NGDN	93	92.553	ENSMLEG00000037525	NGDN	93	91.468	Mandrillus_leucophaeus
ENSODEG00000002730	NGDN	91	53.571	ENSMAMG00000007995	ngdn	83	51.916	Mastacembelus_armatus
ENSODEG00000002730	NGDN	93	56.294	ENSMZEG00005011874	ngdn	90	55.709	Maylandia_zebra
ENSODEG00000002730	NGDN	81	91.429	ENSMAUG00000011909	Ngdn	92	91.429	Mesocricetus_auratus
ENSODEG00000002730	NGDN	100	94.079	ENSMICG00000010111	NGDN	93	92.150	Microcebus_murinus
ENSODEG00000002730	NGDN	93	90.071	ENSMOCG00000021605	Ngdn	93	88.396	Microtus_ochrogaster
ENSODEG00000002730	NGDN	91	53.763	ENSMMOG00000005420	ngdn	85	52.128	Mola_mola
ENSODEG00000002730	NGDN	93	86.268	ENSMODG00000004257	NGDN	91	84.983	Monodelphis_domestica
ENSODEG00000002730	NGDN	100	53.746	ENSMALG00000019654	ngdn	88	54.196	Monopterus_albus
ENSODEG00000002730	NGDN	93	88.339	MGP_CAROLIEiJ_G0019285	Ngdn	93	87.372	Mus_caroli
ENSODEG00000002730	NGDN	93	89.399	ENSMUSG00000022204	Ngdn	93	88.396	Mus_musculus
ENSODEG00000002730	NGDN	93	87.986	MGP_PahariEiJ_G0030302	Ngdn	93	86.689	Mus_pahari
ENSODEG00000002730	NGDN	93	89.046	MGP_SPRETEiJ_G0020174	Ngdn	93	88.055	Mus_spretus
ENSODEG00000002730	NGDN	89	92.222	ENSMPUG00000006439	NGDN	92	92.537	Mustela_putorius_furo
ENSODEG00000002730	NGDN	93	92.199	ENSMLUG00000017232	NGDN	90	90.278	Myotis_lucifugus
ENSODEG00000002730	NGDN	92	92.171	ENSNGAG00000003165	Ngdn	93	90.785	Nannospalax_galili
ENSODEG00000002730	NGDN	83	58.025	ENSNBRG00000023962	ngdn	85	50.538	Neolamprologus_brichardi
ENSODEG00000002730	NGDN	93	94.326	ENSNLEG00000027739	NGDN	93	93.174	Nomascus_leucogenys
ENSODEG00000002730	NGDN	94	85.085	ENSMEUG00000010596	NGDN	94	84.983	Notamacropus_eugenii
ENSODEG00000002730	NGDN	94	90.941	ENSOPRG00000016594	NGDN	93	90.102	Ochotona_princeps
ENSODEG00000002730	NGDN	93	56.294	ENSONIG00000008106	ngdn	90	55.709	Oreochromis_niloticus
ENSODEG00000002730	NGDN	93	83.860	ENSOANG00000013060	NGDN	93	82.653	Ornithorhynchus_anatinus
ENSODEG00000002730	NGDN	94	91.289	ENSOCUG00000013973	NGDN	93	92.150	Oryctolagus_cuniculus
ENSODEG00000002730	NGDN	89	55.839	ENSORLG00000006124	ngdn	84	55.208	Oryzias_latipes
ENSODEG00000002730	NGDN	89	56.569	ENSORLG00020004656	ngdn	90	55.208	Oryzias_latipes_hni
ENSODEG00000002730	NGDN	89	56.204	ENSORLG00015001467	ngdn	90	55.556	Oryzias_latipes_hsok
ENSODEG00000002730	NGDN	89	58.182	ENSOMEG00000016586	ngdn	90	55.903	Oryzias_melastigma
ENSODEG00000002730	NGDN	92	93.950	ENSOGAG00000008735	NGDN	93	92.150	Otolemur_garnettii
ENSODEG00000002730	NGDN	93	91.519	ENSOARG00000019301	NGDN	93	90.102	Ovis_aries
ENSODEG00000002730	NGDN	96	93.493	ENSPPAG00000039327	NGDN	93	92.491	Pan_paniscus
ENSODEG00000002730	NGDN	92	91.815	ENSPPRG00000020120	NGDN	93	89.761	Panthera_pardus
ENSODEG00000002730	NGDN	92	91.459	ENSPTIG00000012462	NGDN	93	89.420	Panthera_tigris_altaica
ENSODEG00000002730	NGDN	96	93.151	ENSPTRG00000006177	NGDN	93	92.150	Pan_troglodytes
ENSODEG00000002730	NGDN	93	92.199	ENSPANG00000026138	NGDN	93	91.126	Papio_anubis
ENSODEG00000002730	NGDN	100	56.678	ENSPKIG00000008183	ngdn	81	58.993	Paramormyrops_kingsleyae
ENSODEG00000002730	NGDN	92	51.943	ENSPMGG00000022036	ngdn	93	50.340	Periophthalmus_magnuspinnatus
ENSODEG00000002730	NGDN	92	91.103	ENSPEMG00000010734	Ngdn	93	89.761	Peromyscus_maniculatus_bairdii
ENSODEG00000002730	NGDN	99	54.902	ENSPMAG00000004469	ngdn	90	54.483	Petromyzon_marinus
ENSODEG00000002730	NGDN	93	86.268	ENSPCIG00000012961	NGDN	92	84.589	Phascolarctos_cinereus
ENSODEG00000002730	NGDN	100	56.026	ENSPFOG00000010423	ngdn	89	57.343	Poecilia_formosa
ENSODEG00000002730	NGDN	100	56.352	ENSPLAG00000022684	ngdn	89	57.692	Poecilia_latipinna
ENSODEG00000002730	NGDN	100	56.678	ENSPMEG00000020850	ngdn	89	58.042	Poecilia_mexicana
ENSODEG00000002730	NGDN	100	55.700	ENSPREG00000011208	ngdn	89	56.993	Poecilia_reticulata
ENSODEG00000002730	NGDN	99	93.333	ENSPPYG00000005670	NGDN	93	92.833	Pongo_abelii
ENSODEG00000002730	NGDN	61	89.474	ENSPCAG00000007252	-	62	90.909	Procavia_capensis
ENSODEG00000002730	NGDN	93	93.662	ENSPCOG00000027627	NGDN	93	92.491	Propithecus_coquereli
ENSODEG00000002730	NGDN	93	92.254	ENSPVAG00000005178	NGDN	94	89.761	Pteropus_vampyrus
ENSODEG00000002730	NGDN	93	55.594	ENSPNYG00000013193	ngdn	87	55.944	Pundamilia_nyererei
ENSODEG00000002730	NGDN	90	55.714	ENSPNAG00000005995	ngdn	92	54.237	Pygocentrus_nattereri
ENSODEG00000002730	NGDN	93	90.106	ENSRNOG00000018069	Ngdn	93	89.078	Rattus_norvegicus
ENSODEG00000002730	NGDN	93	92.199	ENSRBIG00000035850	NGDN	93	90.785	Rhinopithecus_bieti
ENSODEG00000002730	NGDN	93	92.199	ENSRROG00000031932	NGDN	92	92.164	Rhinopithecus_roxellana
ENSODEG00000002730	NGDN	93	92.933	ENSSBOG00000029466	NGDN	99	91.379	Saimiri_boliviensis_boliviensis
ENSODEG00000002730	NGDN	94	84.746	ENSSHAG00000015351	NGDN	93	84.642	Sarcophilus_harrisii
ENSODEG00000002730	NGDN	90	59.783	ENSSFOG00015012601	ngdn	91	58.763	Scleropages_formosus
ENSODEG00000002730	NGDN	100	55.049	ENSSMAG00000020166	ngdn	93	55.184	Scophthalmus_maximus
ENSODEG00000002730	NGDN	100	55.049	ENSSDUG00000020600	ngdn	91	55.670	Seriola_dumerili
ENSODEG00000002730	NGDN	100	55.049	ENSSLDG00000007140	ngdn	91	55.670	Seriola_lalandi_dorsalis
ENSODEG00000002730	NGDN	93	81.625	ENSSARG00000000643	NGDN	94	81.911	Sorex_araneus
ENSODEG00000002730	NGDN	92	53.710	ENSSPAG00000021672	ngdn	88	52.083	Stegastes_partitus
ENSODEG00000002730	NGDN	93	91.844	ENSSSCG00000002020	-	93	90.444	Sus_scrofa
ENSODEG00000002730	NGDN	90	52.899	ENSTRUG00000006677	ngdn	88	52.313	Takifugu_rubripes
ENSODEG00000002730	NGDN	92	54.930	ENSTNIG00000018972	ngdn	91	54.671	Tetraodon_nigroviridis
ENSODEG00000002730	NGDN	100	91.776	ENSTTRG00000010655	NGDN	95	91.126	Tursiops_truncatus
ENSODEG00000002730	NGDN	93	91.901	ENSUAMG00000007475	NGDN	92	92.164	Ursus_americanus
ENSODEG00000002730	NGDN	93	91.901	ENSUMAG00000014789	NGDN	80	89.865	Ursus_maritimus
ENSODEG00000002730	NGDN	93	91.873	ENSVPAG00000010012	NGDN	94	90.444	Vicugna_pacos
ENSODEG00000002730	NGDN	93	91.519	ENSVVUG00000025104	NGDN	93	89.691	Vulpes_vulpes
ENSODEG00000002730	NGDN	92	64.158	ENSXETG00000014562	ngdn	92	63.574	Xenopus_tropicalis
ENSODEG00000002730	NGDN	91	54.448	ENSXCOG00000005102	ngdn	90	54.007	Xiphophorus_couchianus
ENSODEG00000002730	NGDN	100	56.026	ENSXMAG00000006206	ngdn	89	57.692	Xiphophorus_maculatus