EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000002748 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 2088 bases
Position: chrJH651742.1:2520533-2522620
Accession: 101565071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003583	RRM_1	PF00076.22	8.9e-57	1	4
ENSODEP00000003583	RRM_1	PF00076.22	8.9e-57	2	4
ENSODEP00000003583	RRM_1	PF00076.22	8.9e-57	3	4
ENSODEP00000003583	RRM_1	PF00076.22	8.9e-57	4	4
ENSODEP00000003582	RRM_1	PF00076.22	9.5e-57	1	4
ENSODEP00000003582	RRM_1	PF00076.22	9.5e-57	2	4
ENSODEP00000003582	RRM_1	PF00076.22	9.5e-57	3	4
ENSODEP00000003582	RRM_1	PF00076.22	9.5e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003656	-	1971	XM_012517895	ENSODEP00000003582	656 (aa)	XP_012373349	-
ENSODET00000003657	-	1902	-	ENSODEP00000003583	633 (aa)	-	-

Gene Model

Click here to download ENSODEG00000002748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000002748	-	99	72.333	ENSODEG00000007803	-	90	71.971
ENSODEG00000002748	-	91	80.000	ENSODEG00000003281	-	91	86.308
ENSODEG00000002748	-	57	31.515	ENSODEG00000009409	TIA1	74	31.250
ENSODEG00000002748	-	100	78.466	ENSODEG00000002441	-	92	92.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002748	-	65	84.127	ENSG00000115053	NCL	98	85.714	Homo_sapiens
ENSODEG00000002748	-	59	90.476	ENSANAG00000035814	-	91	72.685	Aotus_nancymaae
ENSODEG00000002748	-	98	70.732	ENSANAG00000024378	-	98	65.337	Aotus_nancymaae
ENSODEG00000002748	-	74	80.396	ENSBTAG00000016174	NCL	72	90.451	Bos_taurus
ENSODEG00000002748	-	56	87.448	ENSBTAG00000026909	-	81	87.764	Bos_taurus
ENSODEG00000002748	-	70	79.537	ENSBTAG00000051320	-	84	81.343	Bos_taurus
ENSODEG00000002748	-	91	86.008	ENSBTAG00000050728	-	81	85.950	Bos_taurus
ENSODEG00000002748	-	59	90.476	ENSCJAG00000013538	NCL	53	90.451	Callithrix_jacchus
ENSODEG00000002748	-	59	89.785	ENSCHIG00000021052	-	77	91.556	Capra_hircus
ENSODEG00000002748	-	91	70.988	ENSCHIG00000026149	-	53	83.289	Capra_hircus
ENSODEG00000002748	-	91	62.562	ENSCHIG00000012143	-	80	75.332	Capra_hircus
ENSODEG00000002748	-	65	83.521	ENSCHIG00000010894	-	70	90.186	Capra_hircus
ENSODEG00000002748	-	90	66.720	ENSTSYG00000036886	-	59	80.780	Carlito_syrichta
ENSODEG00000002748	-	95	73.498	ENSTSYG00000029779	-	96	70.209	Carlito_syrichta
ENSODEG00000002748	-	91	75.994	ENSTSYG00000004355	-	91	72.588	Carlito_syrichta
ENSODEG00000002748	-	59	90.476	ENSCCAG00000021040	-	53	90.451	Cebus_capucinus
ENSODEG00000002748	-	87	84.422	ENSCCAG00000000551	-	82	84.422	Cebus_capucinus
ENSODEG00000002748	-	91	77.607	ENSCATG00000037033	NCL	91	71.605	Cercocebus_atys
ENSODEG00000002748	-	59	90.501	ENSCSAG00000006660	NCL	95	88.610	Chlorocebus_sabaeus
ENSODEG00000002748	-	64	72.170	ENSCHOG00000012860	NCL	77	76.011	Choloepus_hoffmanni
ENSODEG00000002748	-	73	95.455	ENSCANG00000036756	NCL	94	95.833	Colobus_angolensis_palliatus
ENSODEG00000002748	-	100	62.974	ENSCGRG00001022350	-	95	61.867	Cricetulus_griseus_chok1gshd
ENSODEG00000002748	-	85	74.129	ENSCGRG00000017894	-	65	85.366	Cricetulus_griseus_crigri
ENSODEG00000002748	-	100	62.481	ENSCGRG00000000507	-	54	76.423	Cricetulus_griseus_crigri
ENSODEG00000002748	-	91	75.915	ENSDNOG00000010783	-	53	88.654	Dasypus_novemcinctus
ENSODEG00000002748	-	91	71.944	ENSDNOG00000046347	-	91	72.527	Dasypus_novemcinctus
ENSODEG00000002748	-	58	71.892	ENSDORG00000023596	-	92	62.401	Dipodomys_ordii
ENSODEG00000002748	-	59	85.146	ENSETEG00000014756	-	86	85.146	Echinops_telfairi
ENSODEG00000002748	-	59	85.224	ENSETEG00000018937	-	53	85.146	Echinops_telfairi
ENSODEG00000002748	-	74	58.542	ENSETEG00000008553	-	78	62.097	Echinops_telfairi
ENSODEG00000002748	-	91	53.477	ENSETEG00000008139	-	63	63.812	Echinops_telfairi
ENSODEG00000002748	-	85	76.860	ENSEASG00005008488	NCL	81	93.119	Equus_asinus_asinus
ENSODEG00000002748	-	91	75.569	ENSECAG00000021868	NCL	77	89.655	Equus_caballus
ENSODEG00000002748	-	85	75.932	ENSEEUG00000005913	NCL	83	76.570	Erinaceus_europaeus
ENSODEG00000002748	-	90	94.064	ENSGGOG00000004300	NCL	87	86.939	Gorilla_gorilla
ENSODEG00000002748	-	91	81.692	ENSHGLG00000002031	-	91	81.972	Heterocephalus_glaber_female
ENSODEG00000002748	-	52	83.562	ENSHGLG00000005133	-	93	74.377	Heterocephalus_glaber_female
ENSODEG00000002748	-	91	75.277	ENSHGLG00000011069	-	54	86.450	Heterocephalus_glaber_female
ENSODEG00000002748	-	91	82.353	ENSHGLG00100014537	-	91	82.481	Heterocephalus_glaber_male
ENSODEG00000002748	-	91	73.948	ENSHGLG00100000745	-	57	85.637	Heterocephalus_glaber_male
ENSODEG00000002748	-	59	76.923	ENSJJAG00000016165	Ncl	80	75.597	Jaculus_jaculus
ENSODEG00000002748	-	91	68.323	ENSLAFG00000013061	NCL	56	79.683	Loxodonta_africana
ENSODEG00000002748	-	91	77.642	ENSMFAG00000040385	NCL	91	71.275	Macaca_fascicularis
ENSODEG00000002748	-	91	77.642	ENSMMUG00000018094	NCL	82	94.037	Macaca_mulatta
ENSODEG00000002748	-	89	94.064	ENSMNEG00000023839	NCL	83	94.037	Macaca_nemestrina
ENSODEG00000002748	-	91	77.761	ENSMLEG00000028935	NCL	91	71.385	Mandrillus_leucophaeus
ENSODEG00000002748	-	91	76.037	ENSMICG00000002538	-	53	89.920	Microcebus_murinus
ENSODEG00000002748	-	91	76.763	ENSMICG00000029975	-	89	76.016	Microcebus_murinus
ENSODEG00000002748	-	58	69.648	ENSNGAG00000006188	-	53	67.905	Nannospalax_galili
ENSODEG00000002748	-	91	74.404	ENSOCUG00000004312	NCL	91	74.920	Oryctolagus_cuniculus
ENSODEG00000002748	-	91	67.521	ENSOGAG00000027852	NCL	90	67.925	Otolemur_garnettii
ENSODEG00000002748	-	74	84.375	ENSOARG00000013270	-	51	87.912	Ovis_aries
ENSODEG00000002748	-	74	84.756	ENSOARG00000020709	-	77	89.245	Ovis_aries
ENSODEG00000002748	-	90	94.064	ENSPPAG00000011619	NCL	87	86.939	Pan_paniscus
ENSODEG00000002748	-	90	94.064	ENSPTRG00000013025	NCL	87	87.347	Pan_troglodytes
ENSODEG00000002748	-	91	77.642	ENSPANG00000010292	NCL	91	71.275	Papio_anubis
ENSODEG00000002748	-	91	71.919	ENSPCOG00000004160	-	94	68.868	Propithecus_coquereli
ENSODEG00000002748	-	91	76.840	ENSPCOG00000003051	-	91	75.617	Propithecus_coquereli
ENSODEG00000002748	-	91	72.239	ENSRBIG00000037525	-	54	88.064	Rhinopithecus_bieti
ENSODEG00000002748	-	91	93.056	ENSRBIG00000035396	-	89	91.216	Rhinopithecus_bieti
ENSODEG00000002748	-	89	94.064	ENSRROG00000028756	-	83	94.037	Rhinopithecus_roxellana
ENSODEG00000002748	-	91	94.286	ENSRROG00000036103	-	82	93.785	Rhinopithecus_roxellana
ENSODEG00000002748	-	59	90.212	ENSSBOG00000029193	-	53	90.186	Saimiri_boliviensis_boliviensis
ENSODEG00000002748	-	90	72.146	ENSSBOG00000023094	-	91	72.146	Saimiri_boliviensis_boliviensis
ENSODEG00000002748	-	91	69.764	ENSSBOG00000027549	-	91	69.375	Saimiri_boliviensis_boliviensis
ENSODEG00000002748	-	59	79.365	ENSTBEG00000001546	-	71	79.310	Tupaia_belangeri
ENSODEG00000002748	-	80	73.333	ENSTBEG00000002469	-	73	72.840	Tupaia_belangeri
ENSODEG00000002748	-	91	75.269	ENSTTRG00000009094	NCL	52	88.889	Tursiops_truncatus
ENSODEG00000002748	-	85	74.606	ENSUAMG00000005639	NCL	75	89.655	Ursus_americanus
ENSODEG00000002748	-	77	78.779	ENSVPAG00000001796	NCL	73	78.551	Vicugna_pacos
ENSODEG00000002748	-	91	77.742	ENSVVUG00000025564	NCL	91	79.459	Vulpes_vulpes