EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000002857 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1769 bases
Position: chrJH651769.1:279910-281678
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003731	DEAD	PF00270.29	6.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003806	-	1647	-	ENSODEP00000003731	548 (aa)	-	-

Gene Model

Click here to download ENSODEG00000002857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002857's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000002857	-	75	30.444	ENSODEG00000003592	DDX23	53	30.444
ENSODEG00000002857	-	71	32.338	ENSODEG00000007330	DDX18	55	32.723
ENSODEG00000002857	-	64	30.226	ENSODEG00000012713	-	84	30.226
ENSODEG00000002857	-	72	31.325	ENSODEG00000001355	-	61	31.325
ENSODEG00000002857	-	74	31.075	ENSODEG00000008505	DDX41	66	30.769
ENSODEG00000002857	-	72	33.086	ENSODEG00000016951	-	58	33.086
ENSODEG00000002857	-	76	32.143	ENSODEG00000016207	-	75	32.143
ENSODEG00000002857	-	74	32.530	ENSODEG00000009771	DDX59	64	32.530
ENSODEG00000002857	-	63	30.184	ENSODEG00000014807	DDX56	100	30.446
ENSODEG00000002857	-	51	30.070	ENSODEG00000018638	-	88	30.070
ENSODEG00000002857	-	51	30.769	ENSODEG00000019833	-	88	30.769
ENSODEG00000002857	-	64	31.339	ENSODEG00000012890	DDX47	74	31.339
ENSODEG00000002857	-	96	84.696	ENSODEG00000012814	-	99	84.696
ENSODEG00000002857	-	62	30.000	ENSODEG00000009622	DDX51	71	30.000
ENSODEG00000002857	-	64	31.461	ENSODEG00000017512	-	84	31.161
ENSODEG00000002857	-	72	33.333	ENSODEG00000003839	-	60	33.333
ENSODEG00000002857	-	68	30.400	ENSODEG00000007950	DDX6	76	30.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002857	-	99	84.317	ENSG00000278053	DDX52	99	89.474	Homo_sapiens
ENSODEG00000002857	-	90	65.996	ENSAPOG00000008759	ddx52	76	63.277	Acanthochromis_polyacanthus
ENSODEG00000002857	-	99	83.108	ENSAMEG00000013159	DDX52	99	83.108	Ailuropoda_melanoleuca
ENSODEG00000002857	-	82	70.732	ENSACIG00000002843	ddx52	84	68.644	Amphilophus_citrinellus
ENSODEG00000002857	-	89	67.276	ENSAOCG00000007983	ddx52	90	61.041	Amphiprion_ocellaris
ENSODEG00000002857	-	89	67.276	ENSAOCG00000000356	-	76	63.060	Amphiprion_ocellaris
ENSODEG00000002857	-	89	67.480	ENSAPEG00000023456	ddx52	70	67.755	Amphiprion_percula
ENSODEG00000002857	-	91	66.206	ENSATEG00000021525	ddx52	78	63.501	Anabas_testudineus
ENSODEG00000002857	-	91	74.498	ENSACAG00000006395	DDX52	96	74.498	Anolis_carolinensis
ENSODEG00000002857	-	99	83.642	ENSANAG00000028587	DDX52	99	83.642	Aotus_nancymaae
ENSODEG00000002857	-	90	65.600	ENSACLG00000021447	ddx52	83	63.931	Astatotilapia_calliptera
ENSODEG00000002857	-	86	71.002	ENSAMXG00000024377	ddx52	96	61.474	Astyanax_mexicanus
ENSODEG00000002857	-	99	81.895	ENSBTAG00000010313	DDX52	99	82.095	Bos_taurus
ENSODEG00000002857	-	94	39.964	WBGene00011032	R05D11.4	87	40.344	Caenorhabditis_elegans
ENSODEG00000002857	-	99	83.137	ENSCJAG00000015190	DDX52	99	83.137	Callithrix_jacchus
ENSODEG00000002857	-	99	84.370	ENSCAFG00000018145	-	99	84.370	Canis_familiaris
ENSODEG00000002857	-	99	84.459	ENSCAFG00000013554	-	99	84.459	Canis_familiaris
ENSODEG00000002857	-	95	85.764	ENSCAFG00020003753	DDX52	96	85.764	Canis_lupus_dingo
ENSODEG00000002857	-	99	82.125	ENSCHIG00000006275	DDX52	99	83.826	Capra_hircus
ENSODEG00000002857	-	99	82.968	ENSTSYG00000002996	DDX52	99	82.968	Carlito_syrichta
ENSODEG00000002857	-	96	75.475	ENSCAPG00000010436	DDX52	95	75.475	Cavia_aperea
ENSODEG00000002857	-	99	86.565	ENSCPOG00000001232	DDX52	99	86.565	Cavia_porcellus
ENSODEG00000002857	-	99	83.474	ENSCCAG00000023213	DDX52	99	83.474	Cebus_capucinus
ENSODEG00000002857	-	99	82.125	ENSCATG00000041437	DDX52	99	83.811	Cercocebus_atys
ENSODEG00000002857	-	99	88.156	ENSCLAG00000016292	DDX52	99	88.156	Chinchilla_lanigera
ENSODEG00000002857	-	99	83.642	ENSCSAG00000006122	DDX52	99	83.642	Chlorocebus_sabaeus
ENSODEG00000002857	-	70	92.105	ENSCHOG00000007413	DDX52	72	92.105	Choloepus_hoffmanni
ENSODEG00000002857	-	90	82.150	ENSCPBG00000009806	DDX52	80	81.139	Chrysemys_picta_bellii
ENSODEG00000002857	-	83	49.257	ENSCING00000016218	-	99	49.257	Ciona_intestinalis
ENSODEG00000002857	-	70	53.197	ENSCSAVG00000003835	-	98	52.750	Ciona_savignyi
ENSODEG00000002857	-	99	83.277	ENSCANG00000035140	DDX52	99	83.277	Colobus_angolensis_palliatus
ENSODEG00000002857	-	99	80.504	ENSCGRG00001020695	Ddx52	99	82.017	Cricetulus_griseus_chok1gshd
ENSODEG00000002857	-	99	80.336	ENSCGRG00000008830	Ddx52	99	81.849	Cricetulus_griseus_crigri
ENSODEG00000002857	-	90	63.690	ENSCSEG00000010008	ddx52	75	64.484	Cynoglossus_semilaevis
ENSODEG00000002857	-	95	61.620	ENSCVAG00000005302	ddx52	91	64.991	Cyprinodon_variegatus
ENSODEG00000002857	-	95	60.801	ENSDARG00000100505	ddx52	97	60.804	Danio_rerio
ENSODEG00000002857	-	99	83.025	ENSDNOG00000047454	DDX52	99	83.025	Dasypus_novemcinctus
ENSODEG00000002857	-	99	83.898	ENSDORG00000004276	Ddx52	99	83.898	Dipodomys_ordii
ENSODEG00000002857	-	79	53.596	FBgn0036754	CG5589	85	49.206	Drosophila_melanogaster
ENSODEG00000002857	-	99	75.000	ENSETEG00000016042	DDX52	99	75.680	Echinops_telfairi
ENSODEG00000002857	-	70	41.604	ENSEBUG00000010838	-	90	42.893	Eptatretus_burgeri
ENSODEG00000002857	-	98	83.932	ENSEASG00005011275	DDX52	91	83.932	Equus_asinus_asinus
ENSODEG00000002857	-	99	83.756	ENSECAG00000012286	DDX52	99	83.756	Equus_caballus
ENSODEG00000002857	-	69	95.652	ENSEEUG00000001153	DDX52	67	78.358	Erinaceus_europaeus
ENSODEG00000002857	-	82	69.710	ENSELUG00000018002	ddx52	98	60.289	Esox_lucius
ENSODEG00000002857	-	99	83.926	ENSFCAG00000010573	DDX52	99	83.926	Felis_catus
ENSODEG00000002857	-	96	72.251	ENSFALG00000005155	DDX52	96	71.282	Ficedula_albicollis
ENSODEG00000002857	-	99	76.988	ENSFDAG00000011133	-	99	76.988	Fukomys_damarensis
ENSODEG00000002857	-	99	85.279	ENSFDAG00000008340	-	99	85.279	Fukomys_damarensis
ENSODEG00000002857	-	95	64.773	ENSFHEG00000017239	ddx52	91	59.167	Fundulus_heteroclitus
ENSODEG00000002857	-	96	61.775	ENSGMOG00000014879	ddx52	99	61.775	Gadus_morhua
ENSODEG00000002857	-	93	77.299	ENSGALG00000005489	DDX52	96	71.088	Gallus_gallus
ENSODEG00000002857	-	94	64.313	ENSGAFG00000000702	ddx52	82	64.313	Gambusia_affinis
ENSODEG00000002857	-	98	60.102	ENSGACG00000020624	ddx52	99	68.298	Gasterosteus_aculeatus
ENSODEG00000002857	-	90	79.919	ENSGAGG00000007234	DDX52	79	78.926	Gopherus_agassizii
ENSODEG00000002857	-	99	84.317	ENSGGOG00000028224	DDX52	99	84.317	Gorilla_gorilla
ENSODEG00000002857	-	93	64.981	ENSHBUG00000015638	ddx52	78	63.722	Haplochromis_burtoni
ENSODEG00000002857	-	96	85.565	ENSHGLG00000006235	-	97	85.565	Heterocephalus_glaber_female
ENSODEG00000002857	-	93	74.168	ENSHGLG00000019205	-	89	74.168	Heterocephalus_glaber_female
ENSODEG00000002857	-	93	74.168	ENSHGLG00100018699	-	90	74.168	Heterocephalus_glaber_male
ENSODEG00000002857	-	81	94.131	ENSHGLG00100013765	-	83	94.131	Heterocephalus_glaber_male
ENSODEG00000002857	-	99	61.706	ENSHCOG00000007966	ddx52	97	61.706	Hippocampus_comes
ENSODEG00000002857	-	88	69.835	ENSIPUG00000008623	ddx52	97	61.269	Ictalurus_punctatus
ENSODEG00000002857	-	55	91.971	ENSSTOG00000002550	DDX52	85	91.971	Ictidomys_tridecemlineatus
ENSODEG00000002857	-	99	82.185	ENSJJAG00000021877	Ddx52	99	82.185	Jaculus_jaculus
ENSODEG00000002857	-	89	68.916	ENSKMAG00000022270	ddx52	96	74.425	Kryptolebias_marmoratus
ENSODEG00000002857	-	92	64.542	ENSLBEG00000015403	ddx52	79	62.335	Labrus_bergylta
ENSODEG00000002857	-	99	67.508	ENSLACG00000012514	DDX52	96	66.946	Latimeria_chalumnae
ENSODEG00000002857	-	72	72.043	ENSLOCG00000005928	ddx52	95	69.792	Lepisosteus_oculatus
ENSODEG00000002857	-	96	75.742	ENSLAFG00000002635	DDX52	100	94.615	Loxodonta_africana
ENSODEG00000002857	-	99	82.125	ENSMFAG00000000640	DDX52	99	83.811	Macaca_fascicularis
ENSODEG00000002857	-	99	82.631	ENSMMUG00000002980	DDX52	99	83.980	Macaca_mulatta
ENSODEG00000002857	-	99	81.956	ENSMNEG00000043658	DDX52	99	83.642	Macaca_nemestrina
ENSODEG00000002857	-	99	83.811	ENSMLEG00000017518	DDX52	99	83.811	Mandrillus_leucophaeus
ENSODEG00000002857	-	90	66.935	ENSMAMG00000019719	ddx52	73	66.935	Mastacembelus_armatus
ENSODEG00000002857	-	93	64.591	ENSMZEG00005019044	ddx52	78	63.346	Maylandia_zebra
ENSODEG00000002857	-	91	79.042	ENSMGAG00000008091	DDX52	89	77.369	Meleagris_gallopavo
ENSODEG00000002857	-	99	82.423	ENSMAUG00000021084	Ddx52	99	82.765	Mesocricetus_auratus
ENSODEG00000002857	-	95	78.070	ENSMICG00000004290	-	98	78.070	Microcebus_murinus
ENSODEG00000002857	-	99	81.145	ENSMOCG00000009654	Ddx52	99	82.323	Microtus_ochrogaster
ENSODEG00000002857	-	98	64.182	ENSMMOG00000018825	ddx52	89	64.364	Mola_mola
ENSODEG00000002857	-	91	86.826	ENSMODG00000002493	DDX52	87	83.992	Monodelphis_domestica
ENSODEG00000002857	-	94	64.107	ENSMALG00000007621	ddx52	87	64.326	Monopterus_albus
ENSODEG00000002857	-	99	80.135	MGP_CAROLIEiJ_G0016888	Ddx52	99	81.145	Mus_caroli
ENSODEG00000002857	-	99	80.640	ENSMUSG00000020677	Ddx52	99	81.481	Mus_musculus
ENSODEG00000002857	-	99	80.808	MGP_PahariEiJ_G0018018	Ddx52	99	81.818	Mus_pahari
ENSODEG00000002857	-	99	80.808	MGP_SPRETEiJ_G0017733	Ddx52	99	81.650	Mus_spretus
ENSODEG00000002857	-	99	84.148	ENSMPUG00000015007	DDX52	99	84.148	Mustela_putorius_furo
ENSODEG00000002857	-	99	82.660	ENSMLUG00000007167	-	99	83.165	Myotis_lucifugus
ENSODEG00000002857	-	89	91.633	ENSMLUG00000024480	-	100	91.633	Myotis_lucifugus
ENSODEG00000002857	-	99	83.277	ENSNGAG00000020686	Ddx52	99	83.277	Nannospalax_galili
ENSODEG00000002857	-	89	67.213	ENSNBRG00000007750	ddx52	90	66.270	Neolamprologus_brichardi
ENSODEG00000002857	-	99	83.615	ENSNLEG00000002826	DDX52	99	83.615	Nomascus_leucogenys
ENSODEG00000002857	-	72	89.059	ENSMEUG00000011234	DDX52	98	89.059	Notamacropus_eugenii
ENSODEG00000002857	-	99	73.311	ENSOPRG00000003899	DDX52	99	73.604	Ochotona_princeps
ENSODEG00000002857	-	91	65.805	ENSONIG00000004869	ddx52	84	63.947	Oreochromis_niloticus
ENSODEG00000002857	-	94	82.692	ENSOANG00000007133	DDX52	87	82.692	Ornithorhynchus_anatinus
ENSODEG00000002857	-	99	82.799	ENSOCUG00000014532	DDX52	99	82.799	Oryctolagus_cuniculus
ENSODEG00000002857	-	88	67.983	ENSORLG00000005241	ddx52	77	66.733	Oryzias_latipes
ENSODEG00000002857	-	88	67.702	ENSORLG00015015546	ddx52	75	65.949	Oryzias_latipes_hsok
ENSODEG00000002857	-	84	70.652	ENSOMEG00000017602	ddx52	89	59.898	Oryzias_melastigma
ENSODEG00000002857	-	96	80.416	ENSOGAG00000000868	DDX52	98	80.416	Otolemur_garnettii
ENSODEG00000002857	-	99	82.125	ENSOARG00000002998	DDX52	99	82.968	Ovis_aries
ENSODEG00000002857	-	99	83.533	ENSPPAG00000028453	DDX52	99	83.533	Pan_paniscus
ENSODEG00000002857	-	99	85.345	ENSPPRG00000009742	DDX52	99	85.345	Panthera_pardus
ENSODEG00000002857	-	99	85.000	ENSPTIG00000013697	DDX52	99	85.000	Panthera_tigris_altaica
ENSODEG00000002857	-	99	83.811	ENSPTRG00000009058	DDX52	99	83.811	Pan_troglodytes
ENSODEG00000002857	-	99	81.788	ENSPANG00000022101	DDX52	99	83.474	Papio_anubis
ENSODEG00000002857	-	97	62.214	ENSPKIG00000013058	ddx52	97	63.009	Paramormyrops_kingsleyae
ENSODEG00000002857	-	95	73.415	ENSPSIG00000010226	DDX52	96	73.043	Pelodiscus_sinensis
ENSODEG00000002857	-	94	63.636	ENSPMGG00000005458	ddx52	99	63.056	Periophthalmus_magnuspinnatus
ENSODEG00000002857	-	99	82.095	ENSPEMG00000003263	Ddx52	99	82.432	Peromyscus_maniculatus_bairdii
ENSODEG00000002857	-	91	86.492	ENSPCIG00000017730	DDX52	90	75.879	Phascolarctos_cinereus
ENSODEG00000002857	-	95	60.417	ENSPFOG00000018378	ddx52	91	59.228	Poecilia_formosa
ENSODEG00000002857	-	95	60.417	ENSPLAG00000008368	ddx52	91	59.228	Poecilia_latipinna
ENSODEG00000002857	-	95	60.243	ENSPMEG00000002359	ddx52	91	59.060	Poecilia_mexicana
ENSODEG00000002857	-	95	60.764	ENSPREG00000016874	ddx52	92	59.432	Poecilia_reticulata
ENSODEG00000002857	-	99	83.838	ENSPPYG00000008221	DDX52	99	83.838	Pongo_abelii
ENSODEG00000002857	-	98	72.260	ENSPCAG00000005814	DDX52	98	73.459	Procavia_capensis
ENSODEG00000002857	-	99	82.264	ENSPVAG00000010462	DDX52	99	82.264	Pteropus_vampyrus
ENSODEG00000002857	-	99	63.985	ENSPNYG00000020730	ddx52	97	63.985	Pundamilia_nyererei
ENSODEG00000002857	-	86	69.556	ENSPNAG00000014707	ddx52	79	68.016	Pygocentrus_nattereri
ENSODEG00000002857	-	99	81.145	ENSRNOG00000002612	Ddx52	99	81.481	Rattus_norvegicus
ENSODEG00000002857	-	99	76.054	ENSRBIG00000032462	DDX52	99	76.054	Rhinopithecus_bieti
ENSODEG00000002857	-	99	77.066	ENSRROG00000034760	DDX52	99	77.066	Rhinopithecus_roxellana
ENSODEG00000002857	-	82	44.348	YGL171W	-	81	43.723	Saccharomyces_cerevisiae
ENSODEG00000002857	-	99	83.277	ENSSBOG00000035787	DDX52	99	83.277	Saimiri_boliviensis_boliviensis
ENSODEG00000002857	-	94	85.000	ENSSHAG00000013962	DDX52	84	85.000	Sarcophilus_harrisii
ENSODEG00000002857	-	90	70.341	ENSSFOG00015005055	ddx52	98	63.834	Scleropages_formosus
ENSODEG00000002857	-	86	68.076	ENSSMAG00000009788	ddx52	79	64.353	Scophthalmus_maximus
ENSODEG00000002857	-	86	68.922	ENSSDUG00000004022	ddx52	77	65.631	Seriola_dumerili
ENSODEG00000002857	-	95	65.201	ENSSLDG00000016999	ddx52	90	64.432	Seriola_lalandi_dorsalis
ENSODEG00000002857	-	74	76.842	ENSSARG00000000371	-	58	96.324	Sorex_araneus
ENSODEG00000002857	-	89	80.285	ENSSPUG00000000720	DDX52	79	79.331	Sphenodon_punctatus
ENSODEG00000002857	-	89	66.142	ENSSPAG00000014211	ddx52	73	65.504	Stegastes_partitus
ENSODEG00000002857	-	99	82.799	ENSSSCG00000021275	DDX52	99	82.799	Sus_scrofa
ENSODEG00000002857	-	96	71.404	ENSTGUG00000008303	-	99	70.884	Taeniopygia_guttata
ENSODEG00000002857	-	88	69.151	ENSTRUG00000017071	ddx52	73	66.469	Takifugu_rubripes
ENSODEG00000002857	-	98	61.158	ENSTNIG00000009990	ddx52	99	61.092	Tetraodon_nigroviridis
ENSODEG00000002857	-	73	70.922	ENSTBEG00000005982	DDX52	75	70.922	Tupaia_belangeri
ENSODEG00000002857	-	99	83.108	ENSTTRG00000008917	DDX52	99	83.108	Tursiops_truncatus
ENSODEG00000002857	-	99	83.587	ENSVPAG00000001979	DDX52	99	83.587	Vicugna_pacos
ENSODEG00000002857	-	96	87.856	ENSVVUG00000020209	DDX52	98	87.856	Vulpes_vulpes
ENSODEG00000002857	-	87	80.167	ENSXETG00000025903	ddx52	99	69.707	Xenopus_tropicalis
ENSODEG00000002857	-	91	65.945	ENSXMAG00000010805	ddx52	80	64.583	Xiphophorus_maculatus