EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000002928 (Gene tree)
Gene ID: 101569440
Gene Symbol: EEFSEC
Alias: -
Full Name: eukaryotic elongation factor%2C selenocysteine-tRNA specific
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 234885 bases
Position: chrJH651769.1:545491-780375
Accession: 101569440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003822	GTP_EFTU	PF00009.27	9.6e-27	1	1
ENSODEP00000003820	GTP_EFTU	PF00009.27	5.1e-26	1	1
ENSODEP00000003821	GTP_EFTU	PF00009.27	6.5e-08	1	1
ENSODEP00000003822	MMR_HSR1	PF01926.23	1.8e-06	1	1
ENSODEP00000003820	MMR_HSR1	PF01926.23	9.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003896	EEFSEC-201	1746	XM_004646097	ENSODEP00000003820	581 (aa)	XP_004646154	UPI0003337534
ENSODET00000003897	EEFSEC-202	1632	-	ENSODEP00000003821	543 (aa)	-	-
ENSODET00000003898	EEFSEC-203	795	-	ENSODEP00000003822	265 (aa)	-	-

Gene Model

Click here to download ENSODEG00000002928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002928's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002928	EEFSEC	100	86.577	ENSG00000132394	EEFSEC	100	86.745	Homo_sapiens
ENSODEG00000002928	EEFSEC	99	63.122	ENSAPOG00000015931	eefsec	98	63.122	Acanthochromis_polyacanthus
ENSODEG00000002928	EEFSEC	91	81.489	ENSAMEG00000015165	EEFSEC	99	81.489	Ailuropoda_melanoleuca
ENSODEG00000002928	EEFSEC	99	70.896	ENSACIG00000022407	eefsec	99	66.176	Amphilophus_citrinellus
ENSODEG00000002928	EEFSEC	99	63.636	ENSAOCG00000008603	eefsec	98	63.636	Amphiprion_ocellaris
ENSODEG00000002928	EEFSEC	99	62.752	ENSAPEG00000017090	eefsec	98	62.752	Amphiprion_percula
ENSODEG00000002928	EEFSEC	98	66.792	ENSATEG00000002753	eefsec	99	61.849	Anabas_testudineus
ENSODEG00000002928	EEFSEC	80	78.472	ENSAPLG00000006745	EEFSEC	100	78.472	Anas_platyrhynchos
ENSODEG00000002928	EEFSEC	59	81.529	ENSACAG00000028177	-	100	81.529	Anolis_carolinensis
ENSODEG00000002928	EEFSEC	100	86.409	ENSANAG00000032691	EEFSEC	100	86.409	Aotus_nancymaae
ENSODEG00000002928	EEFSEC	99	70.412	ENSACLG00000024565	eefsec	98	65.683	Astatotilapia_calliptera
ENSODEG00000002928	EEFSEC	99	63.328	ENSAMXG00000002260	eefsec	97	63.328	Astyanax_mexicanus
ENSODEG00000002928	EEFSEC	100	87.591	ENSBTAG00000030962	EEFSEC	100	84.576	Bos_taurus
ENSODEG00000002928	EEFSEC	90	39.184	WBGene00008133	efsc-1	90	32.563	Caenorhabditis_elegans
ENSODEG00000002928	EEFSEC	100	86.745	ENSCJAG00000005387	EEFSEC	100	86.745	Callithrix_jacchus
ENSODEG00000002928	EEFSEC	99	86.265	ENSCAFG00000004135	EEFSEC	81	86.500	Canis_familiaris
ENSODEG00000002928	EEFSEC	100	86.333	ENSCAFG00020004811	EEFSEC	100	86.500	Canis_lupus_dingo
ENSODEG00000002928	EEFSEC	100	85.714	ENSCHIG00000021838	EEFSEC	100	85.886	Capra_hircus
ENSODEG00000002928	EEFSEC	100	87.919	ENSTSYG00000012922	EEFSEC	100	87.919	Carlito_syrichta
ENSODEG00000002928	EEFSEC	94	85.547	ENSCAPG00000000084	EEFSEC	98	87.373	Cavia_aperea
ENSODEG00000002928	EEFSEC	100	95.094	ENSCPOG00000024352	EEFSEC	100	95.094	Cavia_porcellus
ENSODEG00000002928	EEFSEC	100	86.745	ENSCCAG00000031336	EEFSEC	100	86.745	Cebus_capucinus
ENSODEG00000002928	EEFSEC	100	86.577	ENSCATG00000019414	EEFSEC	100	87.603	Cercocebus_atys
ENSODEG00000002928	EEFSEC	100	96.604	ENSCLAG00000006973	EEFSEC	100	96.604	Chinchilla_lanigera
ENSODEG00000002928	EEFSEC	100	86.409	ENSCSAG00000008599	EEFSEC	100	86.409	Chlorocebus_sabaeus
ENSODEG00000002928	EEFSEC	99	82.576	ENSCPBG00000014356	EEFSEC	82	81.855	Chrysemys_picta_bellii
ENSODEG00000002928	EEFSEC	98	62.977	ENSCSAVG00000002208	-	100	57.483	Ciona_savignyi
ENSODEG00000002928	EEFSEC	100	85.906	ENSCANG00000031492	EEFSEC	99	86.074	Colobus_angolensis_palliatus
ENSODEG00000002928	EEFSEC	100	87.307	ENSCGRG00001018089	Eefsec	100	87.307	Cricetulus_griseus_chok1gshd
ENSODEG00000002928	EEFSEC	100	91.353	ENSCGRG00000010063	Eefsec	100	91.353	Cricetulus_griseus_crigri
ENSODEG00000002928	EEFSEC	99	70.149	ENSCSEG00000003008	eefsec	99	65.809	Cynoglossus_semilaevis
ENSODEG00000002928	EEFSEC	99	62.818	ENSCVAG00000005381	eefsec	99	62.818	Cyprinodon_variegatus
ENSODEG00000002928	EEFSEC	92	72.289	ENSDARG00000004696	eefsec	99	63.283	Danio_rerio
ENSODEG00000002928	EEFSEC	100	81.081	ENSDNOG00000008925	EEFSEC	100	81.788	Dasypus_novemcinctus
ENSODEG00000002928	EEFSEC	90	71.633	ENSDORG00000000264	Eefsec	99	86.598	Dipodomys_ordii
ENSODEG00000002928	EEFSEC	91	54.959	FBgn0034627	eEFSec	95	45.489	Drosophila_melanogaster
ENSODEG00000002928	EEFSEC	94	87.356	ENSETEG00000007406	EEFSEC	99	76.858	Echinops_telfairi
ENSODEG00000002928	EEFSEC	75	68.817	ENSEBUG00000015029	eefsec	96	49.907	Eptatretus_burgeri
ENSODEG00000002928	EEFSEC	100	87.563	ENSEASG00005006786	EEFSEC	100	87.731	Equus_asinus_asinus
ENSODEG00000002928	EEFSEC	100	87.899	ENSECAG00000016565	EEFSEC	100	88.067	Equus_caballus
ENSODEG00000002928	EEFSEC	99	60.811	ENSELUG00000016632	eefsec	98	60.811	Esox_lucius
ENSODEG00000002928	EEFSEC	100	86.789	ENSFCAG00000006153	EEFSEC	100	87.291	Felis_catus
ENSODEG00000002928	EEFSEC	90	73.415	ENSFALG00000007901	EEFSEC	99	73.415	Ficedula_albicollis
ENSODEG00000002928	EEFSEC	90	92.041	ENSFDAG00000010243	EEFSEC	100	92.763	Fukomys_damarensis
ENSODEG00000002928	EEFSEC	98	66.792	ENSFHEG00000007155	eefsec	98	63.051	Fundulus_heteroclitus
ENSODEG00000002928	EEFSEC	99	59.691	ENSGMOG00000007705	eefsec	98	60.342	Gadus_morhua
ENSODEG00000002928	EEFSEC	99	75.043	ENSGALG00000038684	EEFSEC	99	75.043	Gallus_gallus
ENSODEG00000002928	EEFSEC	99	63.435	ENSGAFG00000021692	eefsec	99	63.667	Gambusia_affinis
ENSODEG00000002928	EEFSEC	97	66.160	ENSGACG00000000793	eefsec	99	62.838	Gasterosteus_aculeatus
ENSODEG00000002928	EEFSEC	93	82.114	ENSGAGG00000002059	EEFSEC	98	74.266	Gopherus_agassizii
ENSODEG00000002928	EEFSEC	92	86.948	ENSGGOG00000001445	EEFSEC	99	88.201	Gorilla_gorilla
ENSODEG00000002928	EEFSEC	99	63.808	ENSHBUG00000008917	eefsec	98	63.808	Haplochromis_burtoni
ENSODEG00000002928	EEFSEC	100	92.943	ENSHGLG00000000094	EEFSEC	100	94.079	Heterocephalus_glaber_female
ENSODEG00000002928	EEFSEC	100	92.427	ENSHGLG00100011393	EEFSEC	96	92.427	Heterocephalus_glaber_male
ENSODEG00000002928	EEFSEC	97	66.920	ENSHCOG00000004193	eefsec	99	64.274	Hippocampus_comes
ENSODEG00000002928	EEFSEC	98	67.939	ENSIPUG00000017291	eefsec	97	66.160	Ictalurus_punctatus
ENSODEG00000002928	EEFSEC	90	83.673	ENSSTOG00000019802	EEFSEC	99	89.474	Ictidomys_tridecemlineatus
ENSODEG00000002928	EEFSEC	100	93.233	ENSJJAG00000020703	-	100	93.421	Jaculus_jaculus
ENSODEG00000002928	EEFSEC	99	63.481	ENSKMAG00000019907	eefsec	98	63.481	Kryptolebias_marmoratus
ENSODEG00000002928	EEFSEC	99	62.649	ENSLBEG00000017908	eefsec	98	62.649	Labrus_bergylta
ENSODEG00000002928	EEFSEC	92	66.801	ENSLACG00000013137	EEFSEC	98	67.375	Latimeria_chalumnae
ENSODEG00000002928	EEFSEC	91	73.684	ENSLOCG00000014535	eefsec	98	65.240	Lepisosteus_oculatus
ENSODEG00000002928	EEFSEC	99	84.391	ENSLAFG00000001997	EEFSEC	100	84.734	Loxodonta_africana
ENSODEG00000002928	EEFSEC	100	86.913	ENSMFAG00000042128	EEFSEC	100	86.913	Macaca_fascicularis
ENSODEG00000002928	EEFSEC	89	87.810	ENSMMUG00000018663	EEFSEC	100	87.810	Macaca_mulatta
ENSODEG00000002928	EEFSEC	100	86.745	ENSMNEG00000028574	EEFSEC	100	86.745	Macaca_nemestrina
ENSODEG00000002928	EEFSEC	92	87.052	ENSMLEG00000041771	EEFSEC	94	87.052	Mandrillus_leucophaeus
ENSODEG00000002928	EEFSEC	98	71.053	ENSMAMG00000023964	eefsec	99	66.667	Mastacembelus_armatus
ENSODEG00000002928	EEFSEC	99	70.412	ENSMZEG00005009380	eefsec	98	65.683	Maylandia_zebra
ENSODEG00000002928	EEFSEC	72	74.745	ENSMGAG00000007243	EEFSEC	100	74.745	Meleagris_gallopavo
ENSODEG00000002928	EEFSEC	100	92.857	ENSMAUG00000011197	Eefsec	100	92.857	Mesocricetus_auratus
ENSODEG00000002928	EEFSEC	100	93.258	ENSMOCG00000017748	Eefsec	100	93.258	Microtus_ochrogaster
ENSODEG00000002928	EEFSEC	100	69.963	ENSMMOG00000021820	eefsec	99	65.704	Mola_mola
ENSODEG00000002928	EEFSEC	94	85.985	ENSMODG00000008034	EEFSEC	91	81.308	Monodelphis_domestica
ENSODEG00000002928	EEFSEC	98	66.792	ENSMALG00000016211	eefsec	99	65.177	Monopterus_albus
ENSODEG00000002928	EEFSEC	100	94.007	MGP_CAROLIEiJ_G0028627	Eefsec	100	94.488	Mus_caroli
ENSODEG00000002928	EEFSEC	100	93.609	ENSMUSG00000033216	Eefsec	100	94.488	Mus_musculus
ENSODEG00000002928	EEFSEC	100	94.007	MGP_PahariEiJ_G0022366	Eefsec	100	94.488	Mus_pahari
ENSODEG00000002928	EEFSEC	100	93.609	MGP_SPRETEiJ_G0029640	Eefsec	100	94.094	Mus_spretus
ENSODEG00000002928	EEFSEC	99	87.205	ENSMPUG00000017340	EEFSEC	96	87.205	Mustela_putorius_furo
ENSODEG00000002928	EEFSEC	91	86.207	ENSMLUG00000004261	EEFSEC	100	85.628	Myotis_lucifugus
ENSODEG00000002928	EEFSEC	100	93.233	ENSNGAG00000023278	-	100	93.421	Nannospalax_galili
ENSODEG00000002928	EEFSEC	99	70.787	ENSNBRG00000002387	eefsec	98	66.052	Neolamprologus_brichardi
ENSODEG00000002928	EEFSEC	100	86.242	ENSNLEG00000014303	EEFSEC	100	86.409	Nomascus_leucogenys
ENSODEG00000002928	EEFSEC	90	78.163	ENSMEUG00000005747	EEFSEC	100	78.163	Notamacropus_eugenii
ENSODEG00000002928	EEFSEC	99	88.156	ENSOPRG00000011276	EEFSEC	100	88.156	Ochotona_princeps
ENSODEG00000002928	EEFSEC	89	60.282	ENSONIG00000019038	eefsec	100	61.290	Oreochromis_niloticus
ENSODEG00000002928	EEFSEC	89	76.190	ENSOANG00000009108	EEFSEC	99	76.190	Ornithorhynchus_anatinus
ENSODEG00000002928	EEFSEC	100	88.007	ENSOCUG00000016517	EEFSEC	100	88.007	Oryctolagus_cuniculus
ENSODEG00000002928	EEFSEC	99	70.037	ENSORLG00000001377	eefsec	98	65.314	Oryzias_latipes
ENSODEG00000002928	EEFSEC	99	69.663	ENSORLG00020000729	eefsec	98	68.800	Oryzias_latipes_hni
ENSODEG00000002928	EEFSEC	99	62.521	ENSORLG00015001986	eefsec	98	62.521	Oryzias_latipes_hsok
ENSODEG00000002928	EEFSEC	91	59.719	ENSOMEG00000010071	eefsec	89	59.920	Oryzias_melastigma
ENSODEG00000002928	EEFSEC	80	90.345	ENSOGAG00000014084	EEFSEC	97	90.345	Otolemur_garnettii
ENSODEG00000002928	EEFSEC	69	85.333	ENSOARG00000004600	EEFSEC	99	85.333	Ovis_aries
ENSODEG00000002928	EEFSEC	100	86.577	ENSPPAG00000030936	EEFSEC	100	86.745	Pan_paniscus
ENSODEG00000002928	EEFSEC	100	87.584	ENSPPRG00000002846	EEFSEC	100	87.584	Panthera_pardus
ENSODEG00000002928	EEFSEC	90	89.206	ENSPTIG00000013855	EEFSEC	92	87.205	Panthera_tigris_altaica
ENSODEG00000002928	EEFSEC	100	86.577	ENSPTRG00000015353	EEFSEC	100	86.745	Pan_troglodytes
ENSODEG00000002928	EEFSEC	100	86.409	ENSPANG00000017041	EEFSEC	100	86.409	Papio_anubis
ENSODEG00000002928	EEFSEC	99	72.862	ENSPKIG00000005220	eefsec	98	68.498	Paramormyrops_kingsleyae
ENSODEG00000002928	EEFSEC	92	81.967	ENSPSIG00000015135	EEFSEC	97	77.282	Pelodiscus_sinensis
ENSODEG00000002928	EEFSEC	98	68.061	ENSPMGG00000020300	eefsec	99	63.032	Periophthalmus_magnuspinnatus
ENSODEG00000002928	EEFSEC	100	92.857	ENSPEMG00000013677	Eefsec	100	92.857	Peromyscus_maniculatus_bairdii
ENSODEG00000002928	EEFSEC	93	72.222	ENSPMAG00000006779	eefsec	99	65.103	Petromyzon_marinus
ENSODEG00000002928	EEFSEC	89	78.763	ENSPCIG00000020494	EEFSEC	100	79.175	Phascolarctos_cinereus
ENSODEG00000002928	EEFSEC	99	63.265	ENSPFOG00000003748	eefsec	99	63.435	Poecilia_formosa
ENSODEG00000002928	EEFSEC	99	63.265	ENSPLAG00000018012	eefsec	99	63.435	Poecilia_latipinna
ENSODEG00000002928	EEFSEC	99	62.755	ENSPMEG00000001202	eefsec	99	63.265	Poecilia_mexicana
ENSODEG00000002928	EEFSEC	99	62.479	ENSPREG00000012235	eefsec	99	62.479	Poecilia_reticulata
ENSODEG00000002928	EEFSEC	100	86.242	ENSPPYG00000013436	EEFSEC	100	86.409	Pongo_abelii
ENSODEG00000002928	EEFSEC	89	76.371	ENSPCAG00000005883	EEFSEC	100	76.371	Procavia_capensis
ENSODEG00000002928	EEFSEC	100	81.419	ENSPCOG00000023432	EEFSEC	100	81.419	Propithecus_coquereli
ENSODEG00000002928	EEFSEC	93	87.405	ENSPVAG00000007070	EEFSEC	65	87.405	Pteropus_vampyrus
ENSODEG00000002928	EEFSEC	99	70.412	ENSPNYG00000005726	eefsec	98	65.683	Pundamilia_nyererei
ENSODEG00000002928	EEFSEC	98	67.424	ENSPNAG00000016724	eefsec	99	62.500	Pygocentrus_nattereri
ENSODEG00000002928	EEFSEC	100	94.382	ENSRNOG00000012954	Eefsec	100	88.561	Rattus_norvegicus
ENSODEG00000002928	EEFSEC	100	86.409	ENSRBIG00000032635	EEFSEC	100	86.577	Rhinopithecus_bieti
ENSODEG00000002928	EEFSEC	93	93.522	ENSRROG00000030260	-	89	88.636	Rhinopithecus_roxellana
ENSODEG00000002928	EEFSEC	89	88.223	ENSSBOG00000031478	EEFSEC	100	88.223	Saimiri_boliviensis_boliviensis
ENSODEG00000002928	EEFSEC	89	79.381	ENSSHAG00000014760	EEFSEC	100	79.381	Sarcophilus_harrisii
ENSODEG00000002928	EEFSEC	91	70.281	ENSSFOG00015021109	eefsec	98	61.881	Scleropages_formosus
ENSODEG00000002928	EEFSEC	92	71.084	ENSSMAG00000001454	eefsec	99	62.752	Scophthalmus_maximus
ENSODEG00000002928	EEFSEC	96	71.984	ENSSDUG00000007924	eefsec	99	67.433	Seriola_dumerili
ENSODEG00000002928	EEFSEC	98	66.794	ENSSLDG00000024985	eefsec	98	61.684	Seriola_lalandi_dorsalis
ENSODEG00000002928	EEFSEC	50	88.462	ENSSARG00000003789	-	56	90.110	Sorex_araneus
ENSODEG00000002928	EEFSEC	89	71.429	ENSSPUG00000004191	EEFSEC	100	71.843	Sphenodon_punctatus
ENSODEG00000002928	EEFSEC	99	70.896	ENSSPAG00000001320	eefsec	99	65.441	Stegastes_partitus
ENSODEG00000002928	EEFSEC	100	87.912	ENSSSCG00000011619	EEFSEC	100	89.655	Sus_scrofa
ENSODEG00000002928	EEFSEC	93	82.591	ENSTGUG00000007895	EEFSEC	100	74.655	Taeniopygia_guttata
ENSODEG00000002928	EEFSEC	99	63.007	ENSTRUG00000010327	eefsec	98	63.007	Takifugu_rubripes
ENSODEG00000002928	EEFSEC	92	70.281	ENSTNIG00000003225	eefsec	99	63.238	Tetraodon_nigroviridis
ENSODEG00000002928	EEFSEC	100	84.264	ENSTTRG00000000994	EEFSEC	100	84.264	Tursiops_truncatus
ENSODEG00000002928	EEFSEC	100	87.752	ENSUAMG00000017283	EEFSEC	100	87.752	Ursus_americanus
ENSODEG00000002928	EEFSEC	81	88.009	ENSVVUG00000018372	EEFSEC	92	88.009	Vulpes_vulpes
ENSODEG00000002928	EEFSEC	93	80.645	ENSXETG00000002066	eefsec	99	74.518	Xenopus_tropicalis
ENSODEG00000002928	EEFSEC	99	62.988	ENSXCOG00000019916	eefsec	99	63.667	Xiphophorus_couchianus
ENSODEG00000002928	EEFSEC	98	66.038	ENSXMAG00000001839	eefsec	99	63.667	Xiphophorus_maculatus