EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000002994 (Gene tree)
Gene ID: 101576880
Gene Symbol: -
Alias: -
Full Name: non-POU domain containing octamer binding
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 10582 bases
Position: chrJH651795.1:1532970-1543551
Accession: 101576880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003910	RRM_1	PF00076.22	3.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000003987	-	1362	XM_012512832	ENSODEP00000003910	453 (aa)	XP_012368286	-

Gene Model

Click here to download ENSODEG00000002994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000002994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000002994	-	88	52.349	ENSODEG00000007817	-	91	49.458
ENSODEG00000002994	-	90	60.187	ENSODEG00000000530	-	89	60.093
ENSODEG00000002994	-	100	85.654	ENSODEG00000002224	-	100	85.987
ENSODEG00000002994	-	96	66.591	ENSODEG00000004982	-	99	64.027
ENSODEG00000002994	-	76	59.003	ENSODEG00000019012	-	91	49.272
ENSODEG00000002994	-	100	62.151	ENSODEG00000011878	-	100	61.935
ENSODEG00000002994	-	66	54.969	ENSODEG00000005485	SFPQ	52	53.242

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000002994	-	100	91.295	ENSG00000147140	NONO	100	98.089	Homo_sapiens
ENSODEG00000002994	-	100	55.932	ENSAPOG00000023320	nono	95	58.447	Acanthochromis_polyacanthus
ENSODEG00000002994	-	100	91.507	ENSAMEG00000016057	NONO	100	91.507	Ailuropoda_melanoleuca
ENSODEG00000002994	-	87	61.893	ENSACIG00000019987	nono	94	60.230	Amphilophus_citrinellus
ENSODEG00000002994	-	100	55.508	ENSAOCG00000018863	nono	95	57.701	Amphiprion_ocellaris
ENSODEG00000002994	-	74	66.197	ENSAPEG00000011383	nono	87	66.197	Amphiprion_percula
ENSODEG00000002994	-	89	80.569	ENSAPLG00000002642	NONO	98	80.569	Anas_platyrhynchos
ENSODEG00000002994	-	100	76.110	ENSACAG00000015026	NONO	99	76.744	Anolis_carolinensis
ENSODEG00000002994	-	99	61.966	ENSANAG00000035751	-	99	61.325	Aotus_nancymaae
ENSODEG00000002994	-	100	91.295	ENSANAG00000033266	-	100	91.295	Aotus_nancymaae
ENSODEG00000002994	-	100	76.432	ENSANAG00000027089	-	99	76.211	Aotus_nancymaae
ENSODEG00000002994	-	71	68.805	ENSACLG00000012045	nono	91	68.805	Astatotilapia_calliptera
ENSODEG00000002994	-	97	58.511	ENSAMXG00000033933	nono	91	58.295	Astyanax_mexicanus
ENSODEG00000002994	-	100	91.295	ENSBTAG00000012152	NONO	100	91.295	Bos_taurus
ENSODEG00000002994	-	100	91.295	ENSCJAG00000036744	NONO	100	91.295	Callithrix_jacchus
ENSODEG00000002994	-	90	79.294	ENSCAFG00000030809	-	99	78.588	Canis_familiaris
ENSODEG00000002994	-	85	77.344	ENSCAFG00000013766	-	100	80.503	Canis_familiaris
ENSODEG00000002994	-	100	90.234	ENSCAFG00000003207	-	100	90.234	Canis_familiaris
ENSODEG00000002994	-	100	91.507	ENSCAFG00000017071	NONO	100	91.507	Canis_familiaris
ENSODEG00000002994	-	100	88.535	ENSCAFG00020020298	-	100	88.535	Canis_lupus_dingo
ENSODEG00000002994	-	78	81.351	ENSCHIG00000009602	-	89	81.351	Capra_hircus
ENSODEG00000002994	-	100	91.295	ENSCHIG00000000365	-	100	91.295	Capra_hircus
ENSODEG00000002994	-	100	88.110	ENSTSYG00000007423	-	99	88.110	Carlito_syrichta
ENSODEG00000002994	-	99	86.755	ENSTSYG00000036306	-	100	86.755	Carlito_syrichta
ENSODEG00000002994	-	100	78.634	ENSTSYG00000034207	-	99	80.837	Carlito_syrichta
ENSODEG00000002994	-	99	70.444	ENSCAPG00000002354	-	97	69.556	Cavia_aperea
ENSODEG00000002994	-	100	65.939	ENSCAPG00000002723	-	100	65.784	Cavia_aperea
ENSODEG00000002994	-	100	88.174	ENSCAPG00000011616	-	100	88.174	Cavia_aperea
ENSODEG00000002994	-	74	71.304	ENSCAPG00000006522	-	84	71.387	Cavia_aperea
ENSODEG00000002994	-	100	86.804	ENSCPOG00000023605	-	100	86.804	Cavia_porcellus
ENSODEG00000002994	-	79	82.677	ENSCPOG00000036719	-	93	82.804	Cavia_porcellus
ENSODEG00000002994	-	100	83.755	ENSCPOG00000038668	-	100	83.015	Cavia_porcellus
ENSODEG00000002994	-	100	69.890	ENSCPOG00000026604	-	99	69.011	Cavia_porcellus
ENSODEG00000002994	-	100	89.212	ENSCPOG00000010263	-	100	89.212	Cavia_porcellus
ENSODEG00000002994	-	100	90.088	ENSCATG00000039509	NONO	100	90.088	Cercocebus_atys
ENSODEG00000002994	-	100	91.561	ENSCLAG00000003642	NONO	100	91.561	Chinchilla_lanigera
ENSODEG00000002994	-	100	77.593	ENSCPBG00000016659	NONO	100	77.178	Chrysemys_picta_bellii
ENSODEG00000002994	-	100	91.295	ENSCANG00000025310	NONO	100	91.295	Colobus_angolensis_palliatus
ENSODEG00000002994	-	100	91.102	ENSCGRG00001000065	Nono	100	91.102	Cricetulus_griseus_chok1gshd
ENSODEG00000002994	-	89	90.215	ENSCGRG00000004508	Nono	100	90.215	Cricetulus_griseus_crigri
ENSODEG00000002994	-	80	64.323	ENSCSEG00000008189	NONO	94	58.810	Cynoglossus_semilaevis
ENSODEG00000002994	-	79	64.660	ENSCSEG00000010708	nono	90	59.039	Cynoglossus_semilaevis
ENSODEG00000002994	-	79	63.947	ENSCVAG00000003978	nono	94	59.217	Cyprinodon_variegatus
ENSODEG00000002994	-	97	57.725	ENSDARG00000020482	nono	100	55.513	Danio_rerio
ENSODEG00000002994	-	55	82.609	ENSDNOG00000031430	-	100	82.609	Dasypus_novemcinctus
ENSODEG00000002994	-	62	62.838	ENSDNOG00000032215	-	99	62.799	Dasypus_novemcinctus
ENSODEG00000002994	-	100	90.021	ENSDORG00000009294	Nono	100	90.021	Dipodomys_ordii
ENSODEG00000002994	-	86	89.014	ENSETEG00000013823	NONO	86	89.014	Echinops_telfairi
ENSODEG00000002994	-	100	91.507	ENSECAG00000008502	NONO	100	91.507	Equus_caballus
ENSODEG00000002994	-	100	90.446	ENSEEUG00000014404	NONO	100	90.446	Erinaceus_europaeus
ENSODEG00000002994	-	97	59.915	ENSELUG00000001083	nono	100	57.407	Esox_lucius
ENSODEG00000002994	-	100	91.507	ENSFCAG00000043511	-	100	91.507	Felis_catus
ENSODEG00000002994	-	100	68.288	ENSFALG00000011765	NONO	100	67.442	Ficedula_albicollis
ENSODEG00000002994	-	100	91.507	ENSFDAG00000012809	-	100	91.507	Fukomys_damarensis
ENSODEG00000002994	-	100	73.585	ENSFDAG00000006143	-	100	73.375	Fukomys_damarensis
ENSODEG00000002994	-	80	62.730	ENSFHEG00000009714	nono	85	65.014	Fundulus_heteroclitus
ENSODEG00000002994	-	100	76.971	ENSGALG00000005507	NONO	100	76.971	Gallus_gallus
ENSODEG00000002994	-	81	63.566	ENSGAFG00000011460	nono	83	66.942	Gambusia_affinis
ENSODEG00000002994	-	82	63.104	ENSGACG00000011824	nono	94	58.998	Gasterosteus_aculeatus
ENSODEG00000002994	-	100	79.281	ENSGAGG00000025400	-	91	78.858	Gopherus_agassizii
ENSODEG00000002994	-	91	90.421	ENSGGOG00000006194	NONO	91	97.122	Gorilla_gorilla
ENSODEG00000002994	-	100	79.193	ENSGGOG00000036327	-	99	78.981	Gorilla_gorilla
ENSODEG00000002994	-	78	66.667	ENSHBUG00000010741	nono	94	60.230	Haplochromis_burtoni
ENSODEG00000002994	-	100	91.932	ENSHGLG00000005550	NONO	100	91.932	Heterocephalus_glaber_female
ENSODEG00000002994	-	100	91.932	ENSHGLG00100013511	NONO	100	91.932	Heterocephalus_glaber_male
ENSODEG00000002994	-	87	62.470	ENSHCOG00000016441	nono	84	69.209	Hippocampus_comes
ENSODEG00000002994	-	87	61.058	ENSIPUG00000018271	nono	91	56.977	Ictalurus_punctatus
ENSODEG00000002994	-	100	91.507	ENSSTOG00000015869	NONO	100	91.507	Ictidomys_tridecemlineatus
ENSODEG00000002994	-	100	74.409	ENSJJAG00000001971	-	100	72.903	Jaculus_jaculus
ENSODEG00000002994	-	100	90.446	ENSJJAG00000017151	-	100	90.446	Jaculus_jaculus
ENSODEG00000002994	-	91	57.541	ENSKMAG00000002798	nono	100	54.375	Kryptolebias_marmoratus
ENSODEG00000002994	-	82	64.706	ENSLBEG00000022623	nono	84	67.590	Labrus_bergylta
ENSODEG00000002994	-	80	71.540	ENSLACG00000000598	NONO	94	71.139	Latimeria_chalumnae
ENSODEG00000002994	-	100	61.795	ENSLOCG00000014739	nono	100	60.455	Lepisosteus_oculatus
ENSODEG00000002994	-	100	91.525	ENSLAFG00000013422	NONO	100	91.525	Loxodonta_africana
ENSODEG00000002994	-	100	91.295	ENSMFAG00000041557	NONO	100	91.295	Macaca_fascicularis
ENSODEG00000002994	-	80	90.052	ENSMMUG00000020481	NONO	100	90.052	Macaca_mulatta
ENSODEG00000002994	-	100	91.295	ENSMNEG00000009698	NONO	100	91.295	Macaca_nemestrina
ENSODEG00000002994	-	100	91.295	ENSMLEG00000042452	NONO	100	91.295	Mandrillus_leucophaeus
ENSODEG00000002994	-	95	58.242	ENSMAMG00000007314	nono	94	59.268	Mastacembelus_armatus
ENSODEG00000002994	-	71	68.805	ENSMZEG00005010199	nono	91	68.805	Maylandia_zebra
ENSODEG00000002994	-	89	80.806	ENSMGAG00000008869	NONO	98	80.806	Meleagris_gallopavo
ENSODEG00000002994	-	100	90.717	ENSMAUG00000016243	Nono	100	90.717	Mesocricetus_auratus
ENSODEG00000002994	-	100	90.446	ENSMICG00000000232	NONO	100	90.446	Microcebus_murinus
ENSODEG00000002994	-	100	71.519	ENSMOCG00000020099	-	95	71.519	Microtus_ochrogaster
ENSODEG00000002994	-	95	89.755	ENSMOCG00000005532	-	99	89.755	Microtus_ochrogaster
ENSODEG00000002994	-	100	77.849	ENSMOCG00000021293	-	100	80.000	Microtus_ochrogaster
ENSODEG00000002994	-	82	64.377	ENSMMOG00000015503	nono	85	60.829	Mola_mola
ENSODEG00000002994	-	92	83.871	ENSMODG00000004445	NONO	99	83.759	Monodelphis_domestica
ENSODEG00000002994	-	82	61.869	ENSMALG00000001310	nono	87	65.289	Monopterus_albus
ENSODEG00000002994	-	100	90.909	ENSMUSG00000031311	Nono	100	96.939	Mus_musculus
ENSODEG00000002994	-	100	90.526	MGP_PahariEiJ_G0031826	Nono	100	90.526	Mus_pahari
ENSODEG00000002994	-	100	91.507	ENSMPUG00000004937	NONO	100	91.507	Mustela_putorius_furo
ENSODEG00000002994	-	100	90.870	ENSMLUG00000002489	NONO	89	90.870	Myotis_lucifugus
ENSODEG00000002994	-	100	90.658	ENSNGAG00000010857	Nono	100	90.658	Nannospalax_galili
ENSODEG00000002994	-	78	66.933	ENSNBRG00000017083	nono	94	60.460	Neolamprologus_brichardi
ENSODEG00000002994	-	100	88.323	ENSNLEG00000001278	NONO	100	90.052	Nomascus_leucogenys
ENSODEG00000002994	-	100	75.579	ENSMEUG00000004294	NONO	100	75.579	Notamacropus_eugenii
ENSODEG00000002994	-	62	100.000	ENSOPRG00000001139	-	69	100.000	Ochotona_princeps
ENSODEG00000002994	-	78	66.667	ENSONIG00000020497	nono	94	60.230	Oreochromis_niloticus
ENSODEG00000002994	-	100	84.486	ENSOCUG00000021848	-	100	84.486	Oryctolagus_cuniculus
ENSODEG00000002994	-	99	58.482	ENSOCUG00000024801	-	97	58.129	Oryctolagus_cuniculus
ENSODEG00000002994	-	85	59.564	ENSORLG00000012801	nono	83	63.912	Oryzias_latipes
ENSODEG00000002994	-	72	66.185	ENSORLG00020003761	nono	78	66.185	Oryzias_latipes_hni
ENSODEG00000002994	-	85	59.564	ENSORLG00015018033	nono	83	63.912	Oryzias_latipes_hsok
ENSODEG00000002994	-	85	58.753	ENSOMEG00000012702	nono	82	65.278	Oryzias_melastigma
ENSODEG00000002994	-	100	91.102	ENSOGAG00000004834	NONO	100	91.102	Otolemur_garnettii
ENSODEG00000002994	-	100	91.083	ENSOARG00000016966	NONO	99	91.083	Ovis_aries
ENSODEG00000002994	-	100	91.295	ENSPPAG00000032487	NONO	100	91.295	Pan_paniscus
ENSODEG00000002994	-	100	80.467	ENSPPAG00000041394	-	99	80.467	Pan_paniscus
ENSODEG00000002994	-	100	91.507	ENSPPRG00000024537	-	100	91.507	Panthera_pardus
ENSODEG00000002994	-	100	91.295	ENSPTIG00000016068	-	100	91.295	Panthera_tigris_altaica
ENSODEG00000002994	-	100	80.255	ENSPTRG00000051228	-	100	80.255	Pan_troglodytes
ENSODEG00000002994	-	100	91.295	ENSPTRG00000022010	NONO	100	91.295	Pan_troglodytes
ENSODEG00000002994	-	100	72.163	ENSPANG00000035017	-	99	69.807	Papio_anubis
ENSODEG00000002994	-	100	91.295	ENSPANG00000013979	NONO	100	91.295	Papio_anubis
ENSODEG00000002994	-	88	59.005	ENSPKIG00000019475	-	91	62.360	Paramormyrops_kingsleyae
ENSODEG00000002994	-	100	59.034	ENSPKIG00000014500	nono	100	59.748	Paramormyrops_kingsleyae
ENSODEG00000002994	-	100	78.858	ENSPSIG00000010678	NONO	99	78.647	Pelodiscus_sinensis
ENSODEG00000002994	-	82	59.902	ENSPMGG00000023030	nono	82	65.014	Periophthalmus_magnuspinnatus
ENSODEG00000002994	-	100	91.102	ENSPEMG00000011150	Nono	100	91.102	Peromyscus_maniculatus_bairdii
ENSODEG00000002994	-	100	80.713	ENSPCIG00000026515	NONO	100	80.713	Phascolarctos_cinereus
ENSODEG00000002994	-	81	57.881	ENSPFOG00000016436	nono	82	60.606	Poecilia_formosa
ENSODEG00000002994	-	81	62.274	ENSPLAG00000017492	nono	82	65.565	Poecilia_latipinna
ENSODEG00000002994	-	74	66.111	ENSPMEG00000021530	nono	83	65.840	Poecilia_mexicana
ENSODEG00000002994	-	84	62.563	ENSPREG00000010014	nono	82	66.391	Poecilia_reticulata
ENSODEG00000002994	-	100	90.870	ENSPPYG00000020451	NONO	100	90.870	Pongo_abelii
ENSODEG00000002994	-	100	90.526	ENSPCAG00000002541	NONO	100	90.526	Procavia_capensis
ENSODEG00000002994	-	100	91.507	ENSPCOG00000008197	NONO	100	91.507	Propithecus_coquereli
ENSODEG00000002994	-	100	90.446	ENSPVAG00000016503	NONO	100	90.446	Pteropus_vampyrus
ENSODEG00000002994	-	97	56.900	ENSPNAG00000008232	nono	82	56.979	Pygocentrus_nattereri
ENSODEG00000002994	-	100	90.336	ENSRNOG00000003689	Nono	100	90.336	Rattus_norvegicus
ENSODEG00000002994	-	77	89.617	ENSRBIG00000037966	NONO	100	89.617	Rhinopithecus_bieti
ENSODEG00000002994	-	100	91.083	ENSRROG00000043203	NONO	100	91.083	Rhinopithecus_roxellana
ENSODEG00000002994	-	100	91.083	ENSSBOG00000032772	-	100	91.083	Saimiri_boliviensis_boliviensis
ENSODEG00000002994	-	100	93.217	ENSSBOG00000027683	-	99	93.217	Saimiri_boliviensis_boliviensis
ENSODEG00000002994	-	100	70.878	ENSSBOG00000018932	-	97	75.676	Saimiri_boliviensis_boliviensis
ENSODEG00000002994	-	100	82.353	ENSSHAG00000010195	NONO	100	82.353	Sarcophilus_harrisii
ENSODEG00000002994	-	100	60.000	ENSSFOG00015008964	nono	90	72.308	Scleropages_formosus
ENSODEG00000002994	-	89	56.941	ENSSFOG00015000137	-	76	67.708	Scleropages_formosus
ENSODEG00000002994	-	95	57.675	ENSSDUG00000021886	nono	94	59.132	Seriola_dumerili
ENSODEG00000002994	-	95	57.675	ENSSLDG00000012392	nono	94	59.132	Seriola_lalandi_dorsalis
ENSODEG00000002994	-	100	84.289	ENSSARG00000007959	NONO	100	75.746	Sorex_araneus
ENSODEG00000002994	-	80	77.604	ENSSPUG00000003116	NONO	100	77.604	Sphenodon_punctatus
ENSODEG00000002994	-	100	56.356	ENSSPAG00000012663	nono	95	59.361	Stegastes_partitus
ENSODEG00000002994	-	100	91.507	ENSSSCG00000023245	NONO	100	91.507	Sus_scrofa
ENSODEG00000002994	-	100	78.059	ENSTGUG00000007048	NONO	100	77.426	Taeniopygia_guttata
ENSODEG00000002994	-	78	66.138	ENSTRUG00000005554	nono	94	60.455	Takifugu_rubripes
ENSODEG00000002994	-	100	91.507	ENSTTRG00000009605	NONO	100	91.507	Tursiops_truncatus
ENSODEG00000002994	-	100	88.535	ENSUAMG00000008220	NONO	91	97.842	Ursus_americanus
ENSODEG00000002994	-	100	91.507	ENSUMAG00000021550	NONO	100	91.507	Ursus_maritimus
ENSODEG00000002994	-	100	91.507	ENSVPAG00000002272	NONO	100	91.507	Vicugna_pacos
ENSODEG00000002994	-	100	86.792	ENSVVUG00000003390	-	100	86.920	Vulpes_vulpes
ENSODEG00000002994	-	100	69.703	ENSXETG00000020868	nono	99	69.703	Xenopus_tropicalis
ENSODEG00000002994	-	81	63.566	ENSXCOG00000015587	nono	83	66.942	Xiphophorus_couchianus
ENSODEG00000002994	-	81	63.566	ENSXMAG00000019883	nono	83	66.942	Xiphophorus_maculatus