EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000003015 (Gene tree)
Gene ID: 101569550
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 32683 bases
Position: chrJH651684.1:1429623-1462305
Accession: 101569550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000003944	RRM_5	PF13893.6	5.8e-07	1	2
ENSODEP00000003944	RRM_5	PF13893.6	5.8e-07	2	2
ENSODEP00000003943	RRM_5	PF13893.6	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004020	-	3032	XM_004643246	ENSODEP00000003943	847 (aa)	XP_004643303	UPI000333FE2B
ENSODET00000004021	-	2156	XM_004643247	ENSODEP00000003944	559 (aa)	XP_004643304	UPI000333D549

Gene Model

Click here to download ENSODEG00000003015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003015's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003015	-	99	98.345	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSODEG00000003015	-	99	93.415	ENSAMEG00000011347	-	100	93.415	Ailuropoda_melanoleuca
ENSODEG00000003015	-	100	77.486	ENSAPLG00000008118	-	100	75.110	Anas_platyrhynchos
ENSODEG00000003015	-	99	72.429	ENSACAG00000016233	-	99	71.783	Anolis_carolinensis
ENSODEG00000003015	-	76	72.516	ENSANAG00000024654	-	99	72.516	Aotus_nancymaae
ENSODEG00000003015	-	99	97.991	ENSANAG00000022951	-	99	97.991	Aotus_nancymaae
ENSODEG00000003015	-	95	34.086	ENSAMXG00000010681	matr3l1.1	65	34.921	Astyanax_mexicanus
ENSODEG00000003015	-	94	92.637	ENSBTAG00000006756	MATR3	99	92.637	Bos_taurus
ENSODEG00000003015	-	99	96.774	ENSCJAG00000006888	-	99	97.041	Callithrix_jacchus
ENSODEG00000003015	-	100	98.115	ENSCAFG00000001345	MATR3	100	98.115	Canis_familiaris
ENSODEG00000003015	-	99	96.244	ENSCAFG00020010504	-	98	98.887	Canis_lupus_dingo
ENSODEG00000003015	-	100	98.351	ENSCHIG00000025746	-	100	98.351	Capra_hircus
ENSODEG00000003015	-	99	98.109	ENSTSYG00000011028	-	99	98.109	Carlito_syrichta
ENSODEG00000003015	-	100	98.937	ENSCPOG00000014076	-	100	98.937	Cavia_porcellus
ENSODEG00000003015	-	99	98.227	ENSCCAG00000025074	-	99	98.227	Cebus_capucinus
ENSODEG00000003015	-	99	97.670	ENSCATG00000041304	-	99	97.670	Cercocebus_atys
ENSODEG00000003015	-	100	99.174	ENSCLAG00000015998	-	100	99.174	Chinchilla_lanigera
ENSODEG00000003015	-	99	98.582	ENSCSAG00000013075	-	99	98.582	Chlorocebus_sabaeus
ENSODEG00000003015	-	100	76.561	ENSCPBG00000006303	-	77	86.325	Chrysemys_picta_bellii
ENSODEG00000003015	-	99	97.163	ENSCANG00000028224	-	99	97.163	Colobus_angolensis_palliatus
ENSODEG00000003015	-	99	98.109	ENSCGRG00001020227	Matr3	99	98.109	Cricetulus_griseus_chok1gshd
ENSODEG00000003015	-	62	54.902	ENSCGRG00001021120	Zfp638	50	54.902	Cricetulus_griseus_chok1gshd
ENSODEG00000003015	-	99	97.991	ENSCGRG00000011298	Matr3	99	97.991	Cricetulus_griseus_crigri
ENSODEG00000003015	-	69	54.902	ENSCGRG00000008044	Zfp638	50	54.902	Cricetulus_griseus_crigri
ENSODEG00000003015	-	97	32.143	ENSCSEG00000012682	matr3l1.1	81	32.143	Cynoglossus_semilaevis
ENSODEG00000003015	-	77	53.704	ENSCVAG00000005337	matr3l1.1	81	30.580	Cyprinodon_variegatus
ENSODEG00000003015	-	100	92.762	ENSDNOG00000037723	-	100	92.762	Dasypus_novemcinctus
ENSODEG00000003015	-	100	98.587	ENSEASG00005020857	-	100	98.587	Equus_asinus_asinus
ENSODEG00000003015	-	100	98.469	ENSECAG00000012882	MATR3	100	98.469	Equus_caballus
ENSODEG00000003015	-	75	43.689	ENSELUG00000021651	si:ch211-271b14.1	84	43.689	Esox_lucius
ENSODEG00000003015	-	94	30.088	ENSELUG00000021848	matr3l1.1	59	58.491	Esox_lucius
ENSODEG00000003015	-	100	98.469	ENSFCAG00000021911	-	100	98.469	Felis_catus
ENSODEG00000003015	-	100	75.821	ENSFALG00000003071	-	77	85.816	Ficedula_albicollis
ENSODEG00000003015	-	100	97.757	ENSFDAG00000017675	-	100	97.757	Fukomys_damarensis
ENSODEG00000003015	-	100	77.437	ENSGALG00000002478	MATR3	77	86.325	Gallus_gallus
ENSODEG00000003015	-	100	76.393	ENSGAGG00000011386	-	77	86.325	Gopherus_agassizii
ENSODEG00000003015	-	99	98.463	ENSGGOG00000007308	-	99	98.463	Gorilla_gorilla
ENSODEG00000003015	-	100	98.937	ENSHGLG00000004673	MATR3	100	98.937	Heterocephalus_glaber_female
ENSODEG00000003015	-	91	98.428	ENSHGLG00100006442	-	100	98.428	Heterocephalus_glaber_male
ENSODEG00000003015	-	57	37.222	ENSHCOG00000013223	matr3l1.1	84	30.942	Hippocampus_comes
ENSODEG00000003015	-	100	98.233	ENSSTOG00000014746	-	100	98.233	Ictidomys_tridecemlineatus
ENSODEG00000003015	-	91	69.804	ENSJJAG00000011022	-	99	69.020	Jaculus_jaculus
ENSODEG00000003015	-	99	97.518	ENSJJAG00000021710	-	99	97.518	Jaculus_jaculus
ENSODEG00000003015	-	59	53.704	ENSLBEG00000018267	matr3l1.1	81	53.704	Labrus_bergylta
ENSODEG00000003015	-	99	56.196	ENSLACG00000006743	-	85	66.667	Latimeria_chalumnae
ENSODEG00000003015	-	99	97.849	ENSMFAG00000000634	-	99	97.849	Macaca_fascicularis
ENSODEG00000003015	-	60	97.024	ENSMMUG00000015963	-	99	97.024	Macaca_mulatta
ENSODEG00000003015	-	99	97.849	ENSMMUG00000016741	MATR3	99	98.485	Macaca_mulatta
ENSODEG00000003015	-	99	98.700	ENSMNEG00000042856	-	99	98.700	Macaca_nemestrina
ENSODEG00000003015	-	99	98.700	ENSMLEG00000041178	-	99	98.700	Mandrillus_leucophaeus
ENSODEG00000003015	-	73	36.905	ENSMAMG00000013840	matr3l1.1	66	37.247	Mastacembelus_armatus
ENSODEG00000003015	-	100	77.327	ENSMGAG00000001331	-	77	85.897	Meleagris_gallopavo
ENSODEG00000003015	-	99	97.754	ENSMAUG00000011647	Matr3	99	97.754	Mesocricetus_auratus
ENSODEG00000003015	-	95	96.623	ENSMICG00000012438	-	99	96.414	Microcebus_murinus
ENSODEG00000003015	-	99	97.991	ENSMOCG00000015711	Matr3	99	97.991	Microtus_ochrogaster
ENSODEG00000003015	-	100	91.218	ENSMODG00000011925	-	99	89.461	Monodelphis_domestica
ENSODEG00000003015	-	99	97.872	MGP_CAROLIEiJ_G0022108	Matr3	99	97.872	Mus_caroli
ENSODEG00000003015	-	99	97.872	ENSMUSG00000037236	Matr3	99	97.872	Mus_musculus
ENSODEG00000003015	-	99	97.872	MGP_PahariEiJ_G0018842	Matr3	99	97.872	Mus_pahari
ENSODEG00000003015	-	99	97.518	MGP_SPRETEiJ_G0023020	Matr3	99	97.518	Mus_spretus
ENSODEG00000003015	-	100	96.875	ENSMPUG00000009297	-	100	96.875	Mustela_putorius_furo
ENSODEG00000003015	-	99	97.291	ENSMLUG00000005798	-	99	97.291	Myotis_lucifugus
ENSODEG00000003015	-	99	97.872	ENSNGAG00000017452	Matr3	99	97.872	Nannospalax_galili
ENSODEG00000003015	-	99	98.700	ENSNLEG00000009093	-	99	98.700	Nomascus_leucogenys
ENSODEG00000003015	-	99	90.169	ENSOPRG00000016511	-	100	88.023	Ochotona_princeps
ENSODEG00000003015	-	100	98.347	ENSOCUG00000026311	MATR3	100	98.347	Oryctolagus_cuniculus
ENSODEG00000003015	-	63	44.186	ENSORLG00020009362	matr3l1.1	80	33.333	Oryzias_latipes_hni
ENSODEG00000003015	-	55	35.556	ENSORLG00015018551	matr3l1.1	79	33.333	Oryzias_latipes_hsok
ENSODEG00000003015	-	71	36.290	ENSOMEG00000022287	matr3l1.1	81	32.212	Oryzias_melastigma
ENSODEG00000003015	-	99	98.936	ENSOGAG00000010607	-	99	98.936	Otolemur_garnettii
ENSODEG00000003015	-	100	98.351	ENSOARG00000016931	-	99	98.351	Ovis_aries
ENSODEG00000003015	-	99	97.491	ENSPPAG00000001418	-	99	97.491	Pan_paniscus
ENSODEG00000003015	-	97	91.009	ENSPPAG00000026720	-	99	92.870	Pan_paniscus
ENSODEG00000003015	-	100	98.587	ENSPPRG00000008004	-	100	98.587	Panthera_pardus
ENSODEG00000003015	-	98	97.096	ENSPTIG00000010711	-	100	98.522	Panthera_tigris_altaica
ENSODEG00000003015	-	99	97.491	ENSPTRG00000017294	MATR3	99	97.491	Pan_troglodytes
ENSODEG00000003015	-	97	97.798	ENSPANG00000032489	-	99	97.989	Papio_anubis
ENSODEG00000003015	-	99	97.849	ENSPANG00000012018	-	99	97.849	Papio_anubis
ENSODEG00000003015	-	96	34.615	ENSPKIG00000000333	matr3l1.1	74	43.966	Paramormyrops_kingsleyae
ENSODEG00000003015	-	100	76.696	ENSPSIG00000014598	-	77	86.325	Pelodiscus_sinensis
ENSODEG00000003015	-	99	97.400	ENSPEMG00000020679	Matr3	99	97.400	Peromyscus_maniculatus_bairdii
ENSODEG00000003015	-	99	93.400	ENSPPYG00000015835	-	99	93.400	Pongo_abelii
ENSODEG00000003015	-	99	98.227	ENSPCOG00000025718	-	99	98.227	Propithecus_coquereli
ENSODEG00000003015	-	98	93.174	ENSPVAG00000015431	-	100	93.174	Pteropus_vampyrus
ENSODEG00000003015	-	54	44.565	ENSPNYG00000015855	-	96	39.683	Pundamilia_nyererei
ENSODEG00000003015	-	99	97.518	ENSRNOG00000019875	Matr3	99	97.518	Rattus_norvegicus
ENSODEG00000003015	-	99	97.849	ENSRBIG00000034713	-	99	97.849	Rhinopithecus_bieti
ENSODEG00000003015	-	99	97.849	ENSRROG00000039415	-	99	98.228	Rhinopithecus_roxellana
ENSODEG00000003015	-	99	97.045	ENSRROG00000043949	-	99	97.045	Rhinopithecus_roxellana
ENSODEG00000003015	-	99	98.345	ENSSBOG00000030159	-	99	98.345	Saimiri_boliviensis_boliviensis
ENSODEG00000003015	-	100	91.335	ENSSHAG00000010331	-	99	89.578	Sarcophilus_harrisii
ENSODEG00000003015	-	64	45.882	ENSSDUG00000015369	matr3l1.1	75	43.878	Seriola_dumerili
ENSODEG00000003015	-	99	75.492	ENSSPUG00000019236	-	99	74.697	Sphenodon_punctatus
ENSODEG00000003015	-	100	98.469	ENSSSCG00000014343	-	100	98.469	Sus_scrofa
ENSODEG00000003015	-	100	76.528	ENSTGUG00000014568	MATR3	100	75.027	Taeniopygia_guttata
ENSODEG00000003015	-	53	37.327	ENSTRUG00000001692	-	81	35.317	Takifugu_rubripes
ENSODEG00000003015	-	62	57.143	ENSTNIG00000003166	matr3l1.1	88	57.143	Tetraodon_nigroviridis
ENSODEG00000003015	-	85	99.026	ENSUAMG00000000097	-	97	99.026	Ursus_americanus
ENSODEG00000003015	-	100	97.998	ENSUMAG00000015808	-	100	97.998	Ursus_maritimus
ENSODEG00000003015	-	100	92.659	ENSVPAG00000006337	-	100	92.659	Vicugna_pacos
ENSODEG00000003015	-	100	98.351	ENSVVUG00000020287	-	100	98.351	Vulpes_vulpes
ENSODEG00000003015	-	99	52.402	ENSXETG00000003838	matr3	99	51.917	Xenopus_tropicalis