EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003118 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 251 bases
Position: chrJH651640.1:7440624-7440874
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004085	RRM_1	PF00076.22	4.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004164	-	213	-	ENSODEP00000004085	71 (aa)	-	-

Gene Model

Click here to download ENSODEG00000003118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003118	-	77	90.909	ENSODEG00000000894	-	81	90.909
ENSODEG00000003118	-	73	40.385	ENSODEG00000005580	-	58	40.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003118	-	90	85.938	ENSG00000154548	SRSF12	73	66.667	Homo_sapiens
ENSODEG00000003118	-	80	84.211	ENSAPOG00000024545	-	89	84.211	Acanthochromis_polyacanthus
ENSODEG00000003118	-	90	73.438	ENSACIG00000001537	-	91	73.438	Amphilophus_citrinellus
ENSODEG00000003118	-	80	84.211	ENSACIG00000018697	-	84	84.211	Amphilophus_citrinellus
ENSODEG00000003118	-	90	70.312	ENSAPEG00000016160	-	91	70.312	Amphiprion_percula
ENSODEG00000003118	-	90	71.875	ENSATEG00000003493	-	89	71.875	Anabas_testudineus
ENSODEG00000003118	-	80	80.702	ENSAMXG00000031867	-	83	80.702	Astyanax_mexicanus
ENSODEG00000003118	-	89	83.077	ENSCAFG00020013692	-	52	83.077	Canis_lupus_dingo
ENSODEG00000003118	-	86	78.689	ENSCHIG00000011877	-	80	78.689	Capra_hircus
ENSODEG00000003118	-	80	94.737	ENSCHIG00000023999	-	83	94.737	Capra_hircus
ENSODEG00000003118	-	80	80.702	ENSDARG00000112572	CR293507.1	95	80.702	Danio_rerio
ENSODEG00000003118	-	80	75.439	ENSHCOG00000008417	-	66	75.439	Hippocampus_comes
ENSODEG00000003118	-	80	78.947	ENSHCOG00000005897	-	84	78.947	Hippocampus_comes
ENSODEG00000003118	-	80	80.702	ENSIPUG00000023118	-	54	80.702	Ictalurus_punctatus
ENSODEG00000003118	-	80	77.193	ENSLBEG00000012669	-	86	77.193	Labrus_bergylta
ENSODEG00000003118	-	96	69.118	ENSMAMG00000007646	-	76	69.118	Mastacembelus_armatus
ENSODEG00000003118	-	79	78.571	ENSMAMG00000008111	-	85	78.571	Mastacembelus_armatus
ENSODEG00000003118	-	99	84.286	ENSMAUG00000009812	-	99	84.286	Mesocricetus_auratus
ENSODEG00000003118	-	93	69.697	ENSMMOG00000013350	-	94	69.697	Mola_mola
ENSODEG00000003118	-	80	84.211	ENSNBRG00000010616	-	81	84.211	Neolamprologus_brichardi
ENSODEG00000003118	-	80	82.456	ENSPKIG00000000613	-	64	82.456	Paramormyrops_kingsleyae
ENSODEG00000003118	-	94	68.919	ENSPMGG00000023954	-	57	68.919	Periophthalmus_magnuspinnatus
ENSODEG00000003118	-	85	90.000	ENSPEMG00000021564	-	83	90.000	Peromyscus_maniculatus_bairdii
ENSODEG00000003118	-	96	72.059	ENSPNAG00000009501	-	97	72.059	Pygocentrus_nattereri
ENSODEG00000003118	-	77	74.545	ENSSMAG00000018546	-	73	74.545	Scophthalmus_maximus
ENSODEG00000003118	-	80	82.456	ENSSLDG00000002710	-	92	82.456	Seriola_lalandi_dorsalis
ENSODEG00000003118	-	85	73.333	ENSSLDG00000000417	-	79	73.333	Seriola_lalandi_dorsalis
ENSODEG00000003118	-	80	91.525	ENSSPUG00000016216	-	88	91.525	Sphenodon_punctatus
ENSODEG00000003118	-	90	71.875	ENSSPAG00000001821	-	91	71.875	Stegastes_partitus
ENSODEG00000003118	-	80	78.947	ENSTRUG00000019904	-	78	78.947	Takifugu_rubripes