EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003135 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 919 bases
Position: chrJH651606.1:884837-885755
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004108	RRM_1	PF00076.22	8.7e-34	1	2
ENSODEP00000004108	RRM_1	PF00076.22	8.7e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004187	-	873	-	ENSODEP00000004108	290 (aa)	-	-

Gene Model

Click here to download ENSODEG00000003135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003135	-	100	93.960	ENSODEG00000020231	-	86	93.960
ENSODEG00000003135	-	61	39.412	ENSODEG00000003691	-	51	39.412
ENSODEG00000003135	-	61	34.973	ENSODEG00000000671	-	75	33.333
ENSODEG00000003135	-	97	59.643	ENSODEG00000006830	HNRNPAB	83	61.429
ENSODEG00000003135	-	61	36.066	ENSODEG00000019577	-	53	37.059
ENSODEG00000003135	-	61	34.973	ENSODEG00000013694	-	75	33.333
ENSODEG00000003135	-	80	32.099	ENSODEG00000019976	-	50	32.911
ENSODEG00000003135	-	99	96.503	ENSODEG00000002106	-	69	98.909
ENSODEG00000003135	-	61	33.880	ENSODEG00000006941	-	53	34.706
ENSODEG00000003135	-	60	37.975	ENSODEG00000012711	-	60	34.483
ENSODEG00000003135	-	61	38.587	ENSODEG00000008757	-	75	35.102
ENSODEG00000003135	-	97	63.121	ENSODEG00000001897	HNRNPD	87	61.724
ENSODEG00000003135	-	61	37.158	ENSODEG00000020462	-	76	34.979
ENSODEG00000003135	-	64	35.751	ENSODEG00000019007	-	76	34.979
ENSODEG00000003135	-	69	37.198	ENSODEG00000018537	-	69	35.808
ENSODEG00000003135	-	80	36.585	ENSODEG00000019283	-	50	37.500
ENSODEG00000003135	-	57	34.706	ENSODEG00000019566	HNRNPA0	56	34.706
ENSODEG00000003135	-	61	40.000	ENSODEG00000003755	-	58	36.923
ENSODEG00000003135	-	61	36.612	ENSODEG00000014833	-	54	37.647
ENSODEG00000003135	-	100	89.597	ENSODEG00000004187	-	99	89.597
ENSODEG00000003135	-	96	96.763	ENSODEG00000000376	-	84	96.763
ENSODEG00000003135	-	68	37.805	ENSODEG00000005746	-	68	36.306
ENSODEG00000003135	-	61	34.426	ENSODEG00000013137	-	53	35.294
ENSODEG00000003135	-	61	37.158	ENSODEG00000019306	-	76	34.979
ENSODEG00000003135	-	66	38.071	ENSODEG00000006322	-	71	35.833
ENSODEG00000003135	-	86	42.412	ENSODEG00000011974	MSI2	53	49.189
ENSODEG00000003135	-	61	39.073	ENSODEG00000008615	-	72	34.722
ENSODEG00000003135	-	61	40.000	ENSODEG00000016578	-	60	40.000
ENSODEG00000003135	-	53	38.750	ENSODEG00000014815	-	66	37.333
ENSODEG00000003135	-	61	36.612	ENSODEG00000005110	-	61	36.612
ENSODEG00000003135	-	50	40.816	ENSODEG00000006770	ELAVL4	57	40.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003135	-	100	95.973	ENSG00000152795	HNRNPDL	99	95.973	Homo_sapiens
ENSODEG00000003135	-	100	74.916	ENSAMEG00000007660	-	99	72.910	Ailuropoda_melanoleuca
ENSODEG00000003135	-	99	95.932	ENSAMEG00000005145	-	79	95.932	Ailuropoda_melanoleuca
ENSODEG00000003135	-	97	90.530	ENSAPLG00000011774	HNRNPDL	99	90.530	Anas_platyrhynchos
ENSODEG00000003135	-	98	89.003	ENSACAG00000010416	HNRNPDL	92	89.003	Anolis_carolinensis
ENSODEG00000003135	-	100	87.291	ENSANAG00000038001	-	99	87.291	Aotus_nancymaae
ENSODEG00000003135	-	100	88.591	ENSANAG00000030316	-	96	79.070	Aotus_nancymaae
ENSODEG00000003135	-	100	85.616	ENSANAG00000035355	-	99	83.557	Aotus_nancymaae
ENSODEG00000003135	-	100	95.973	ENSANAG00000029054	HNRNPDL	71	95.973	Aotus_nancymaae
ENSODEG00000003135	-	97	74.899	ENSANAG00000035255	-	99	74.089	Aotus_nancymaae
ENSODEG00000003135	-	98	70.847	ENSAMXG00000001495	hnrnpdl	97	68.601	Astyanax_mexicanus
ENSODEG00000003135	-	100	95.973	ENSBTAG00000014804	HNRNPDL	71	95.973	Bos_taurus
ENSODEG00000003135	-	100	95.973	ENSCJAG00000015197	-	71	95.973	Callithrix_jacchus
ENSODEG00000003135	-	71	96.618	ENSCJAG00000045227	-	69	96.373	Callithrix_jacchus
ENSODEG00000003135	-	100	95.973	ENSCAFG00000008940	HNRNPDL	71	95.973	Canis_familiaris
ENSODEG00000003135	-	97	85.357	ENSCAFG00000000776	-	100	85.357	Canis_familiaris
ENSODEG00000003135	-	100	95.973	ENSCAFG00020010699	-	71	95.973	Canis_lupus_dingo
ENSODEG00000003135	-	100	95.973	ENSCHIG00000010260	-	71	95.973	Capra_hircus
ENSODEG00000003135	-	100	67.241	ENSCHIG00000026667	-	68	67.241	Capra_hircus
ENSODEG00000003135	-	97	94.485	ENSTSYG00000031074	-	100	94.485	Carlito_syrichta
ENSODEG00000003135	-	54	80.723	ENSTSYG00000026714	-	88	80.723	Carlito_syrichta
ENSODEG00000003135	-	96	81.949	ENSTSYG00000036907	-	88	80.311	Carlito_syrichta
ENSODEG00000003135	-	90	78.439	ENSCAPG00000015955	-	100	78.439	Cavia_aperea
ENSODEG00000003135	-	98	93.919	ENSCPOG00000015619	-	73	93.919	Cavia_porcellus
ENSODEG00000003135	-	57	94.578	ENSCCAG00000020531	-	77	94.578	Cebus_capucinus
ENSODEG00000003135	-	100	95.973	ENSCCAG00000020777	HNRNPDL	71	95.973	Cebus_capucinus
ENSODEG00000003135	-	97	92.500	ENSCATG00000038573	-	71	92.500	Cercocebus_atys
ENSODEG00000003135	-	70	96.040	ENSCATG00000030349	-	89	96.040	Cercocebus_atys
ENSODEG00000003135	-	98	74.914	ENSCLAG00000010786	-	98	73.883	Chinchilla_lanigera
ENSODEG00000003135	-	100	95.973	ENSCLAG00000008428	HNRNPDL	71	95.973	Chinchilla_lanigera
ENSODEG00000003135	-	100	95.973	ENSCSAG00000004461	HNRNPDL	71	95.973	Chlorocebus_sabaeus
ENSODEG00000003135	-	98	94.521	ENSCHOG00000000160	-	100	94.521	Choloepus_hoffmanni
ENSODEG00000003135	-	97	90.875	ENSCHOG00000009204	-	100	90.875	Choloepus_hoffmanni
ENSODEG00000003135	-	100	92.953	ENSCHOG00000010831	-	89	92.953	Choloepus_hoffmanni
ENSODEG00000003135	-	100	91.275	ENSCHOG00000003275	-	89	85.570	Choloepus_hoffmanni
ENSODEG00000003135	-	97	92.647	ENSCHOG00000002938	-	100	92.647	Choloepus_hoffmanni
ENSODEG00000003135	-	100	90.333	ENSCPBG00000008014	HNRNPDL	99	90.333	Chrysemys_picta_bellii
ENSODEG00000003135	-	97	95.588	ENSCANG00000020228	-	100	95.588	Colobus_angolensis_palliatus
ENSODEG00000003135	-	100	95.638	ENSCGRG00001010960	Hnrnpdl	86	95.221	Cricetulus_griseus_chok1gshd
ENSODEG00000003135	-	97	95.221	ENSCGRG00000011361	-	99	92.857	Cricetulus_griseus_crigri
ENSODEG00000003135	-	98	70.307	ENSDARG00000003429	hnrnpdl	97	69.831	Danio_rerio
ENSODEG00000003135	-	66	74.611	ENSDNOG00000046422	-	99	75.000	Dasypus_novemcinctus
ENSODEG00000003135	-	100	95.302	ENSDNOG00000003887	-	71	95.302	Dasypus_novemcinctus
ENSODEG00000003135	-	92	63.309	ENSDNOG00000034016	-	96	62.366	Dasypus_novemcinctus
ENSODEG00000003135	-	100	92.617	ENSDNOG00000018280	-	99	92.617	Dasypus_novemcinctus
ENSODEG00000003135	-	67	100.000	ENSDNOG00000033765	-	79	100.000	Dasypus_novemcinctus
ENSODEG00000003135	-	96	93.885	ENSDNOG00000033760	-	92	93.885	Dasypus_novemcinctus
ENSODEG00000003135	-	100	89.262	ENSDORG00000024157	-	99	87.248	Dipodomys_ordii
ENSODEG00000003135	-	100	95.973	ENSDORG00000000968	-	71	95.973	Dipodomys_ordii
ENSODEG00000003135	-	77	63.948	ENSETEG00000010820	-	100	62.661	Echinops_telfairi
ENSODEG00000003135	-	100	50.814	ENSEASG00005012961	-	75	61.140	Equus_asinus_asinus
ENSODEG00000003135	-	100	95.973	ENSEASG00005016276	-	71	95.973	Equus_asinus_asinus
ENSODEG00000003135	-	100	51.186	ENSECAG00000040564	-	78	56.067	Equus_caballus
ENSODEG00000003135	-	100	95.973	ENSECAG00000022692	HNRNPDL	74	95.973	Equus_caballus
ENSODEG00000003135	-	99	94.949	ENSEEUG00000004301	-	71	94.949	Erinaceus_europaeus
ENSODEG00000003135	-	98	74.744	ENSELUG00000003241	hnrnpdl	97	70.990	Esox_lucius
ENSODEG00000003135	-	100	95.973	ENSFCAG00000000455	HNRNPDL	71	95.973	Felis_catus
ENSODEG00000003135	-	98	91.065	ENSFALG00000005709	HNRNPDL	96	91.065	Ficedula_albicollis
ENSODEG00000003135	-	74	53.271	ENSFDAG00000002891	-	52	56.842	Fukomys_damarensis
ENSODEG00000003135	-	97	95.604	ENSFDAG00000000851	-	99	95.604	Fukomys_damarensis
ENSODEG00000003135	-	98	91.409	ENSGALG00000023199	HNRNPDL	96	91.409	Gallus_gallus
ENSODEG00000003135	-	100	90.000	ENSGAGG00000003646	HNRNPDL	99	90.333	Gopherus_agassizii
ENSODEG00000003135	-	100	95.973	ENSGGOG00000003714	HNRNPDL	71	95.973	Gorilla_gorilla
ENSODEG00000003135	-	100	95.638	ENSHGLG00000015791	HNRNPDL	71	95.638	Heterocephalus_glaber_female
ENSODEG00000003135	-	93	93.870	ENSHGLG00000013420	-	87	93.870	Heterocephalus_glaber_female
ENSODEG00000003135	-	100	76.897	ENSHGLG00000014427	-	92	97.087	Heterocephalus_glaber_female
ENSODEG00000003135	-	100	82.935	ENSHGLG00100019080	-	91	80.887	Heterocephalus_glaber_male
ENSODEG00000003135	-	100	78.188	ENSHGLG00100016282	-	99	75.503	Heterocephalus_glaber_male
ENSODEG00000003135	-	100	95.638	ENSHGLG00100005262	HNRNPDL	88	95.638	Heterocephalus_glaber_male
ENSODEG00000003135	-	96	75.874	ENSHGLG00100010072	-	93	74.126	Heterocephalus_glaber_male
ENSODEG00000003135	-	100	79.933	ENSHGLG00100017644	-	99	76.923	Heterocephalus_glaber_male
ENSODEG00000003135	-	98	68.259	ENSIPUG00000024951	hnrnpdl	97	66.894	Ictalurus_punctatus
ENSODEG00000003135	-	100	95.973	ENSSTOG00000013979	HNRNPDL	71	95.973	Ictidomys_tridecemlineatus
ENSODEG00000003135	-	63	95.055	ENSJJAG00000000674	-	78	69.176	Jaculus_jaculus
ENSODEG00000003135	-	100	95.973	ENSJJAG00000021673	Hnrnpdl	70	95.973	Jaculus_jaculus
ENSODEG00000003135	-	67	86.179	ENSLACG00000003613	HNRNPDL	72	86.179	Latimeria_chalumnae
ENSODEG00000003135	-	98	75.085	ENSLOCG00000010736	hnrnpdl	97	71.672	Lepisosteus_oculatus
ENSODEG00000003135	-	100	95.638	ENSLAFG00000008612	HNRNPDL	91	95.221	Loxodonta_africana
ENSODEG00000003135	-	90	51.527	ENSLAFG00000031444	-	71	59.677	Loxodonta_africana
ENSODEG00000003135	-	100	95.973	ENSMFAG00000002275	HNRNPDL	71	95.973	Macaca_fascicularis
ENSODEG00000003135	-	97	94.444	ENSMMUG00000015777	HNRNPDL	100	94.444	Macaca_mulatta
ENSODEG00000003135	-	100	95.973	ENSMNEG00000045130	HNRNPDL	71	95.973	Macaca_nemestrina
ENSODEG00000003135	-	100	95.973	ENSMLEG00000041600	HNRNPDL	99	95.973	Mandrillus_leucophaeus
ENSODEG00000003135	-	100	91.275	ENSMLEG00000014825	-	99	91.275	Mandrillus_leucophaeus
ENSODEG00000003135	-	97	88.603	ENSMGAG00000008033	HNRNPDL	100	88.603	Meleagris_gallopavo
ENSODEG00000003135	-	100	94.966	ENSMAUG00000011132	Hnrnpdl	86	94.853	Mesocricetus_auratus
ENSODEG00000003135	-	74	93.056	ENSMICG00000037040	-	88	96.891	Microcebus_murinus
ENSODEG00000003135	-	100	95.638	ENSMICG00000001445	-	73	95.638	Microcebus_murinus
ENSODEG00000003135	-	100	94.966	ENSMOCG00000015928	Hnrnpdl	71	94.966	Microtus_ochrogaster
ENSODEG00000003135	-	67	95.855	ENSMODG00000006825	-	79	95.855	Monodelphis_domestica
ENSODEG00000003135	-	100	94.966	ENSMODG00000011916	-	71	94.966	Monodelphis_domestica
ENSODEG00000003135	-	100	95.638	ENSMUSG00000029328	Hnrnpdl	92	95.638	Mus_musculus
ENSODEG00000003135	-	100	95.302	MGP_PahariEiJ_G0017226	Hnrnpdl	93	95.302	Mus_pahari
ENSODEG00000003135	-	100	95.638	MGP_SPRETEiJ_G0028445	Hnrnpdl	93	95.638	Mus_spretus
ENSODEG00000003135	-	96	73.427	ENSMPUG00000006259	-	100	73.427	Mustela_putorius_furo
ENSODEG00000003135	-	100	91.611	ENSMPUG00000009986	-	94	89.597	Mustela_putorius_furo
ENSODEG00000003135	-	91	73.643	ENSMPUG00000011188	-	99	69.380	Mustela_putorius_furo
ENSODEG00000003135	-	97	95.437	ENSMPUG00000014753	-	99	95.437	Mustela_putorius_furo
ENSODEG00000003135	-	95	75.273	ENSMLUG00000025989	-	79	75.102	Myotis_lucifugus
ENSODEG00000003135	-	93	47.842	ENSMLUG00000030192	-	63	58.470	Myotis_lucifugus
ENSODEG00000003135	-	100	95.302	ENSMLUG00000014452	-	71	95.302	Myotis_lucifugus
ENSODEG00000003135	-	100	94.631	ENSNGAG00000015740	Hnrnpdl	71	94.631	Nannospalax_galili
ENSODEG00000003135	-	100	95.973	ENSNLEG00000008636	HNRNPDL	88	100.000	Nomascus_leucogenys
ENSODEG00000003135	-	71	98.537	ENSMEUG00000011454	-	85	98.537	Notamacropus_eugenii
ENSODEG00000003135	-	100	80.201	ENSMEUG00000010033	HNRNPDL	89	80.201	Notamacropus_eugenii
ENSODEG00000003135	-	97	94.485	ENSOPRG00000007178	-	100	94.485	Ochotona_princeps
ENSODEG00000003135	-	97	95.572	ENSOANG00000004651	HNRNPDL	100	95.572	Ornithorhynchus_anatinus
ENSODEG00000003135	-	100	93.960	ENSOCUG00000013805	-	73	93.960	Oryctolagus_cuniculus
ENSODEG00000003135	-	72	58.571	ENSOCUG00000025252	-	86	61.828	Oryctolagus_cuniculus
ENSODEG00000003135	-	68	89.340	ENSOGAG00000031703	-	81	91.257	Otolemur_garnettii
ENSODEG00000003135	-	100	94.295	ENSOGAG00000002501	-	71	94.295	Otolemur_garnettii
ENSODEG00000003135	-	100	50.847	ENSOGAG00000024995	-	66	64.249	Otolemur_garnettii
ENSODEG00000003135	-	60	95.954	ENSOARG00000011472	-	61	95.954	Ovis_aries
ENSODEG00000003135	-	97	95.588	ENSOARG00000000824	-	84	95.588	Ovis_aries
ENSODEG00000003135	-	76	87.273	ENSOARG00000002402	-	74	87.273	Ovis_aries
ENSODEG00000003135	-	100	95.973	ENSPPAG00000043177	HNRNPDL	71	95.973	Pan_paniscus
ENSODEG00000003135	-	100	95.973	ENSPPRG00000013787	HNRNPDL	71	95.973	Panthera_pardus
ENSODEG00000003135	-	100	95.973	ENSPTIG00000018505	HNRNPDL	99	95.973	Panthera_tigris_altaica
ENSODEG00000003135	-	100	95.973	ENSPTRG00000016217	HNRNPDL	71	95.973	Pan_troglodytes
ENSODEG00000003135	-	100	95.973	ENSPANG00000004761	HNRNPDL	71	95.973	Papio_anubis
ENSODEG00000003135	-	98	75.254	ENSPKIG00000025514	hnrnpdl	97	69.625	Paramormyrops_kingsleyae
ENSODEG00000003135	-	100	90.333	ENSPSIG00000016746	HNRNPDL	90	90.667	Pelodiscus_sinensis
ENSODEG00000003135	-	97	94.853	ENSPEMG00000016545	-	98	89.153	Peromyscus_maniculatus_bairdii
ENSODEG00000003135	-	100	94.966	ENSPCIG00000003089	-	71	94.966	Phascolarctos_cinereus
ENSODEG00000003135	-	71	77.184	ENSPCIG00000009814	-	71	78.836	Phascolarctos_cinereus
ENSODEG00000003135	-	63	82.558	ENSPCIG00000008965	-	70	82.558	Phascolarctos_cinereus
ENSODEG00000003135	-	100	95.973	ENSPPYG00000014886	HNRNPDL	71	95.973	Pongo_abelii
ENSODEG00000003135	-	97	95.221	ENSPCAG00000011543	HNRNPDL	65	95.221	Procavia_capensis
ENSODEG00000003135	-	100	95.638	ENSPCOG00000019831	-	73	95.638	Propithecus_coquereli
ENSODEG00000003135	-	100	84.899	ENSPVAG00000006816	HNRNPDL	71	84.899	Pteropus_vampyrus
ENSODEG00000003135	-	94	72.993	ENSPNAG00000016380	hnrnpdl	82	76.132	Pygocentrus_nattereri
ENSODEG00000003135	-	100	93.960	ENSRNOG00000002270	Hnrnpdl	84	93.382	Rattus_norvegicus
ENSODEG00000003135	-	100	95.973	ENSRBIG00000030310	HNRNPDL	71	95.973	Rhinopithecus_bieti
ENSODEG00000003135	-	100	95.973	ENSRROG00000034174	HNRNPDL	71	95.973	Rhinopithecus_roxellana
ENSODEG00000003135	-	82	72.874	ENSSBOG00000028904	-	99	72.470	Saimiri_boliviensis_boliviensis
ENSODEG00000003135	-	100	77.852	ENSSBOG00000022627	-	99	77.852	Saimiri_boliviensis_boliviensis
ENSODEG00000003135	-	100	87.248	ENSSBOG00000020566	-	99	87.248	Saimiri_boliviensis_boliviensis
ENSODEG00000003135	-	100	94.966	ENSSHAG00000013616	-	79	94.966	Sarcophilus_harrisii
ENSODEG00000003135	-	98	74.744	ENSSFOG00015005893	hnrnpdl	97	71.331	Scleropages_formosus
ENSODEG00000003135	-	91	89.712	ENSSARG00000009961	-	98	89.712	Sorex_araneus
ENSODEG00000003135	-	98	84.932	ENSSPUG00000013700	HNRNPDL	96	85.959	Sphenodon_punctatus
ENSODEG00000003135	-	100	95.973	ENSSSCG00000037245	-	71	95.973	Sus_scrofa
ENSODEG00000003135	-	100	53.041	ENSSSCG00000012473	-	63	68.132	Sus_scrofa
ENSODEG00000003135	-	97	90.074	ENSTGUG00000002850	HNRNPDL	100	90.074	Taeniopygia_guttata
ENSODEG00000003135	-	96	98.561	ENSTBEG00000002817	-	71	98.561	Tupaia_belangeri
ENSODEG00000003135	-	100	91.611	ENSTTRG00000001793	-	71	91.611	Tursiops_truncatus
ENSODEG00000003135	-	100	95.973	ENSUAMG00000011358	HNRNPDL	71	95.973	Ursus_americanus
ENSODEG00000003135	-	100	95.973	ENSUMAG00000008681	HNRNPDL	71	95.973	Ursus_maritimus
ENSODEG00000003135	-	91	77.491	ENSVPAG00000002422	-	100	77.491	Vicugna_pacos
ENSODEG00000003135	-	77	79.121	ENSVVUG00000001421	-	95	79.121	Vulpes_vulpes
ENSODEG00000003135	-	99	87.086	ENSVVUG00000013596	-	99	85.809	Vulpes_vulpes
ENSODEG00000003135	-	100	95.302	ENSVVUG00000024653	HNRNPDL	71	95.302	Vulpes_vulpes
ENSODEG00000003135	-	100	77.592	ENSXETG00000023026	hnrnpdl	100	77.592	Xenopus_tropicalis