EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003165 (Gene tree)
Gene ID: 101578066
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 6900 bases
Position: chrJH651684.1:3121080-3127979
Accession: 101578066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004152	SRP19	PF01922.17	9e-15	1	2
ENSODEP00000004152	SRP19	PF01922.17	9e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004231	-	363	XM_004643263	ENSODEP00000004152	120 (aa)	XP_004643320	UPI0003336F95

Gene Model

Click here to download ENSODEG00000003165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003165	-	100	98.333	ENSODEG00000016828	-	100	98.333
ENSODEG00000003165	-	63	94.667	ENSODEG00000005538	-	66	94.667
ENSODEG00000003165	-	82	92.857	ENSODEG00000000221	-	89	92.857
ENSODEG00000003165	-	89	64.122	ENSODEG00000013862	-	94	65.185
ENSODEG00000003165	-	100	100.000	ENSODEG00000005033	-	100	100.000
ENSODEG00000003165	-	89	78.626	ENSODEG00000019119	-	94	78.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003165	-	67	88.750	ENSCAFG00020008822	-	62	93.151	Canis_lupus_dingo
ENSODEG00000003165	-	93	95.495	ENSCATG00000030502	-	93	95.495	Cercocebus_atys
ENSODEG00000003165	-	100	99.167	ENSCLAG00000008943	-	100	99.167	Chinchilla_lanigera
ENSODEG00000003165	-	93	95.495	ENSCANG00000041172	-	93	95.495	Colobus_angolensis_palliatus
ENSODEG00000003165	-	61	89.041	ENSCGRG00001012009	-	66	89.041	Cricetulus_griseus_chok1gshd
ENSODEG00000003165	-	60	93.056	ENSEEUG00000009240	-	89	93.056	Erinaceus_europaeus
ENSODEG00000003165	-	93	95.495	ENSGGOG00000027482	SRP19	93	95.495	Gorilla_gorilla
ENSODEG00000003165	-	93	70.690	ENSGGOG00000038737	-	93	70.690	Gorilla_gorilla
ENSODEG00000003165	-	89	77.600	ENSHGLG00000006069	-	82	78.295	Heterocephalus_glaber_female
ENSODEG00000003165	-	89	77.600	ENSHGLG00100006563	-	82	78.295	Heterocephalus_glaber_male
ENSODEG00000003165	-	93	95.495	ENSMFAG00000040995	-	93	95.495	Macaca_fascicularis
ENSODEG00000003165	-	93	95.495	ENSMMUG00000000331	-	93	95.495	Macaca_mulatta
ENSODEG00000003165	-	93	95.495	ENSMLEG00000030461	-	93	95.495	Mandrillus_leucophaeus
ENSODEG00000003165	-	93	65.354	ENSMOCG00000010964	-	94	65.354	Microtus_ochrogaster
ENSODEG00000003165	-	93	96.396	ENSNLEG00000030884	-	93	96.396	Nomascus_leucogenys
ENSODEG00000003165	-	93	68.103	ENSPPAG00000040638	-	93	68.103	Pan_paniscus
ENSODEG00000003165	-	95	69.231	ENSPTRG00000045571	-	95	69.231	Pan_troglodytes
ENSODEG00000003165	-	93	64.865	ENSPCOG00000019414	-	91	64.865	Propithecus_coquereli
ENSODEG00000003165	-	93	95.495	ENSRROG00000033974	-	93	95.495	Rhinopithecus_roxellana
ENSODEG00000003165	-	56	94.030	ENSSHAG00000009452	-	87	94.118	Sarcophilus_harrisii
ENSODEG00000003165	-	59	74.648	ENSSPAG00000005240	-	57	74.648	Stegastes_partitus