EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003178 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 505 bases
Position: chrJH651678.1:3010133-3010637
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004168	RRM_1	PF00076.22	3.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004248	-	462	-	ENSODEP00000004168	153 (aa)	-	-

Gene Model

Click here to download ENSODEG00000003178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003178	-	93	73.248	ENSODEG00000019976	-	100	73.248
ENSODEG00000003178	-	71	39.344	ENSODEG00000001897	HNRNPD	57	39.344
ENSODEG00000003178	-	54	32.955	ENSODEG00000016578	-	63	34.848
ENSODEG00000003178	-	93	75.159	ENSODEG00000019234	-	100	75.159
ENSODEG00000003178	-	93	63.694	ENSODEG00000003511	-	100	63.694
ENSODEG00000003178	-	93	72.611	ENSODEG00000019283	-	100	72.611
ENSODEG00000003178	-	93	77.070	ENSODEG00000020479	-	100	77.070
ENSODEG00000003178	-	93	61.972	ENSODEG00000009372	-	100	61.972
ENSODEG00000003178	-	93	43.137	ENSODEG00000000843	-	96	43.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003178	-	95	50.296	ENSG00000099622	CIRBP	100	60.526	Homo_sapiens
ENSODEG00000003178	-	93	74.051	ENSG00000102317	RBM3	100	74.684	Homo_sapiens
ENSODEG00000003178	-	92	46.853	ENSAMEG00000003278	CIRBP	50	47.917	Ailuropoda_melanoleuca
ENSODEG00000003178	-	92	76.774	ENSAMEG00000012653	RBM3	96	76.774	Ailuropoda_melanoleuca
ENSODEG00000003178	-	93	48.387	ENSACAG00000023931	-	100	53.548	Anolis_carolinensis
ENSODEG00000003178	-	93	65.806	ENSACAG00000013718	-	100	65.161	Anolis_carolinensis
ENSODEG00000003178	-	78	45.255	ENSANAG00000027805	-	89	42.424	Aotus_nancymaae
ENSODEG00000003178	-	93	66.875	ENSANAG00000028569	-	100	66.875	Aotus_nancymaae
ENSODEG00000003178	-	93	71.875	ENSANAG00000028883	-	95	73.750	Aotus_nancymaae
ENSODEG00000003178	-	93	70.186	ENSBTAG00000025848	RBM3	100	70.186	Bos_taurus
ENSODEG00000003178	-	93	50.909	ENSBTAG00000007480	CIRBP	77	51.534	Bos_taurus
ENSODEG00000003178	-	62	64.151	ENSCJAG00000047359	-	98	64.179	Callithrix_jacchus
ENSODEG00000003178	-	93	71.250	ENSCJAG00000047341	-	100	73.125	Callithrix_jacchus
ENSODEG00000003178	-	93	73.006	ENSCAFG00000015485	RBM3	100	73.006	Canis_familiaris
ENSODEG00000003178	-	93	50.000	ENSCAFG00000019506	CIRBP	89	50.610	Canis_familiaris
ENSODEG00000003178	-	93	69.281	ENSCAFG00000016002	-	100	69.677	Canis_familiaris
ENSODEG00000003178	-	71	73.109	ENSCAFG00020017705	-	99	73.109	Canis_lupus_dingo
ENSODEG00000003178	-	93	50.000	ENSCAFG00020017138	CIRBP	89	50.610	Canis_lupus_dingo
ENSODEG00000003178	-	92	51.534	ENSCHIG00000021288	CIRBP	95	51.534	Capra_hircus
ENSODEG00000003178	-	93	70.186	ENSCHIG00000009007	RBM3	100	70.186	Capra_hircus
ENSODEG00000003178	-	93	65.753	ENSTSYG00000033076	-	100	67.808	Carlito_syrichta
ENSODEG00000003178	-	93	72.611	ENSTSYG00000008670	-	100	74.522	Carlito_syrichta
ENSODEG00000003178	-	92	56.875	ENSTSYG00000027687	-	100	59.627	Carlito_syrichta
ENSODEG00000003178	-	76	67.969	ENSTSYG00000031540	-	86	61.905	Carlito_syrichta
ENSODEG00000003178	-	93	52.941	ENSTSYG00000034265	-	100	57.962	Carlito_syrichta
ENSODEG00000003178	-	93	59.236	ENSTSYG00000035938	-	100	59.091	Carlito_syrichta
ENSODEG00000003178	-	76	58.333	ENSTSYG00000035220	-	92	63.359	Carlito_syrichta
ENSODEG00000003178	-	93	74.843	ENSCAPG00000005923	RBM3	100	74.843	Cavia_aperea
ENSODEG00000003178	-	93	74.843	ENSCPOG00000003553	RBM3	100	74.843	Cavia_porcellus
ENSODEG00000003178	-	93	71.250	ENSCCAG00000038019	-	100	73.125	Cebus_capucinus
ENSODEG00000003178	-	93	63.399	ENSCCAG00000035552	-	100	63.399	Cebus_capucinus
ENSODEG00000003178	-	92	73.718	ENSCATG00000029986	-	99	74.359	Cercocebus_atys
ENSODEG00000003178	-	92	50.610	ENSCATG00000042253	CIRBP	98	51.220	Cercocebus_atys
ENSODEG00000003178	-	92	73.718	ENSCATG00000038524	-	99	74.359	Cercocebus_atys
ENSODEG00000003178	-	92	51.220	ENSCLAG00000016087	CIRBP	98	51.220	Chinchilla_lanigera
ENSODEG00000003178	-	93	77.707	ENSCLAG00000002908	RBM3	100	77.707	Chinchilla_lanigera
ENSODEG00000003178	-	93	74.051	ENSCSAG00000013242	RBM3	100	74.684	Chlorocebus_sabaeus
ENSODEG00000003178	-	92	50.610	ENSCSAG00000012245	CIRBP	95	51.220	Chlorocebus_sabaeus
ENSODEG00000003178	-	93	70.701	ENSCHOG00000007642	RBM3	100	71.338	Choloepus_hoffmanni
ENSODEG00000003178	-	92	49.697	ENSCPBG00000022930	CIRBP	98	50.909	Chrysemys_picta_bellii
ENSODEG00000003178	-	93	65.161	ENSCPBG00000021859	RBM3	100	67.097	Chrysemys_picta_bellii
ENSODEG00000003178	-	93	48.387	ENSCPBG00000021863	-	100	55.128	Chrysemys_picta_bellii
ENSODEG00000003178	-	95	50.296	ENSCANG00000037000	CIRBP	100	50.625	Colobus_angolensis_palliatus
ENSODEG00000003178	-	93	72.785	ENSCANG00000014668	-	100	73.418	Colobus_angolensis_palliatus
ENSODEG00000003178	-	93	74.051	ENSCANG00000037907	-	100	74.684	Colobus_angolensis_palliatus
ENSODEG00000003178	-	93	53.595	ENSCANG00000031890	-	100	53.595	Colobus_angolensis_palliatus
ENSODEG00000003178	-	93	77.070	ENSCGRG00001018909	Rbm3	100	77.070	Cricetulus_griseus_chok1gshd
ENSODEG00000003178	-	93	77.070	ENSCGRG00000014636	Rbm3	100	77.070	Cricetulus_griseus_crigri
ENSODEG00000003178	-	92	69.032	ENSDNOG00000035132	-	88	69.677	Dasypus_novemcinctus
ENSODEG00000003178	-	86	60.274	ENSDNOG00000037833	-	97	60.959	Dasypus_novemcinctus
ENSODEG00000003178	-	92	72.436	ENSDNOG00000049801	-	96	73.077	Dasypus_novemcinctus
ENSODEG00000003178	-	92	70.968	ENSDNOG00000040748	-	73	71.613	Dasypus_novemcinctus
ENSODEG00000003178	-	92	71.613	ENSDNOG00000041625	-	72	72.258	Dasypus_novemcinctus
ENSODEG00000003178	-	93	60.510	ENSDNOG00000040058	-	97	60.510	Dasypus_novemcinctus
ENSODEG00000003178	-	92	74.194	ENSDNOG00000048200	-	73	74.839	Dasypus_novemcinctus
ENSODEG00000003178	-	93	71.338	ENSDNOG00000032565	-	100	72.611	Dasypus_novemcinctus
ENSODEG00000003178	-	93	73.885	ENSDNOG00000010420	-	73	74.522	Dasypus_novemcinctus
ENSODEG00000003178	-	92	60.135	ENSDNOG00000043650	-	95	60.135	Dasypus_novemcinctus
ENSODEG00000003178	-	87	55.405	ENSDNOG00000040147	-	82	62.838	Dasypus_novemcinctus
ENSODEG00000003178	-	92	69.677	ENSDNOG00000042033	-	72	69.677	Dasypus_novemcinctus
ENSODEG00000003178	-	93	63.871	ENSDNOG00000033435	-	96	64.516	Dasypus_novemcinctus
ENSODEG00000003178	-	93	77.070	ENSDORG00000000182	Rbm3	100	77.070	Dipodomys_ordii
ENSODEG00000003178	-	93	70.909	ENSEASG00005008251	RBM3	100	70.909	Equus_asinus_asinus
ENSODEG00000003178	-	71	56.303	ENSEASG00005023389	-	99	56.303	Equus_asinus_asinus
ENSODEG00000003178	-	93	50.000	ENSEASG00005021677	CIRBP	73	50.000	Equus_asinus_asinus
ENSODEG00000003178	-	62	74.737	ENSECAG00000038298	-	87	70.909	Equus_caballus
ENSODEG00000003178	-	93	75.796	ENSECAG00000024257	RBM3	100	75.796	Equus_caballus
ENSODEG00000003178	-	93	73.913	ENSFCAG00000002245	RBM3	100	73.913	Felis_catus
ENSODEG00000003178	-	71	63.025	ENSFCAG00000021952	-	72	73.438	Felis_catus
ENSODEG00000003178	-	92	50.327	ENSFALG00000014000	CIRBP	95	50.327	Ficedula_albicollis
ENSODEG00000003178	-	92	51.220	ENSFDAG00000002848	CIRBP	95	51.220	Fukomys_damarensis
ENSODEG00000003178	-	93	77.707	ENSFDAG00000007909	RBM3	100	77.707	Fukomys_damarensis
ENSODEG00000003178	-	92	50.920	ENSGALG00000030918	CIRBP	95	50.920	Gallus_gallus
ENSODEG00000003178	-	93	67.532	ENSGAGG00000016475	RBM3	100	68.182	Gopherus_agassizii
ENSODEG00000003178	-	93	48.387	ENSGAGG00000016473	-	100	55.128	Gopherus_agassizii
ENSODEG00000003178	-	93	74.051	ENSGGOG00000005864	RBM3	100	74.684	Gorilla_gorilla
ENSODEG00000003178	-	67	58.716	ENSGGOG00000025080	-	92	58.716	Gorilla_gorilla
ENSODEG00000003178	-	92	50.610	ENSGGOG00000002338	CIRBP	95	51.220	Gorilla_gorilla
ENSODEG00000003178	-	93	68.627	ENSHGLG00000010919	-	100	67.974	Heterocephalus_glaber_female
ENSODEG00000003178	-	93	77.707	ENSHGLG00000006552	RBM3	100	77.707	Heterocephalus_glaber_female
ENSODEG00000003178	-	93	67.516	ENSHGLG00000013635	-	100	67.516	Heterocephalus_glaber_female
ENSODEG00000003178	-	93	50.602	ENSHGLG00000005839	CIRBP	98	51.220	Heterocephalus_glaber_female
ENSODEG00000003178	-	93	67.516	ENSHGLG00100015330	-	100	67.516	Heterocephalus_glaber_male
ENSODEG00000003178	-	93	68.627	ENSHGLG00100014556	-	100	67.974	Heterocephalus_glaber_male
ENSODEG00000003178	-	93	50.602	ENSHGLG00100004955	CIRBP	98	51.220	Heterocephalus_glaber_male
ENSODEG00000003178	-	93	77.707	ENSHGLG00100017487	-	100	77.707	Heterocephalus_glaber_male
ENSODEG00000003178	-	92	51.220	ENSSTOG00000027646	CIRBP	95	51.220	Ictidomys_tridecemlineatus
ENSODEG00000003178	-	93	77.070	ENSSTOG00000027493	-	100	77.070	Ictidomys_tridecemlineatus
ENSODEG00000003178	-	93	77.070	ENSJJAG00000012962	-	100	77.070	Jaculus_jaculus
ENSODEG00000003178	-	84	66.165	ENSJJAG00000022888	-	96	66.165	Jaculus_jaculus
ENSODEG00000003178	-	69	44.961	ENSLACG00000014490	-	67	46.429	Latimeria_chalumnae
ENSODEG00000003178	-	92	42.775	ENSLAFG00000032156	-	95	47.619	Loxodonta_africana
ENSODEG00000003178	-	93	76.774	ENSLAFG00000007003	-	100	76.774	Loxodonta_africana
ENSODEG00000003178	-	92	67.550	ENSLAFG00000029211	-	99	68.212	Loxodonta_africana
ENSODEG00000003178	-	93	74.051	ENSMFAG00000003694	RBM3	100	74.684	Macaca_fascicularis
ENSODEG00000003178	-	95	50.296	ENSMFAG00000034048	CIRBP	100	50.625	Macaca_fascicularis
ENSODEG00000003178	-	92	73.718	ENSMMUG00000037648	-	99	74.359	Macaca_mulatta
ENSODEG00000003178	-	92	50.610	ENSMMUG00000022101	CIRBP	98	51.220	Macaca_mulatta
ENSODEG00000003178	-	93	74.051	ENSMNEG00000042115	-	100	74.684	Macaca_nemestrina
ENSODEG00000003178	-	95	50.296	ENSMNEG00000033116	CIRBP	98	51.220	Macaca_nemestrina
ENSODEG00000003178	-	92	73.718	ENSMNEG00000000984	-	99	74.359	Macaca_nemestrina
ENSODEG00000003178	-	92	50.610	ENSMLEG00000038347	CIRBP	98	51.220	Mandrillus_leucophaeus
ENSODEG00000003178	-	93	74.051	ENSMLEG00000041745	-	100	74.684	Mandrillus_leucophaeus
ENSODEG00000003178	-	92	73.077	ENSMLEG00000027951	-	99	73.077	Mandrillus_leucophaeus
ENSODEG00000003178	-	92	50.307	ENSMGAG00000010253	CIRBP	96	43.243	Meleagris_gallopavo
ENSODEG00000003178	-	93	63.399	ENSMAUG00000008646	-	100	64.052	Mesocricetus_auratus
ENSODEG00000003178	-	93	77.070	ENSMAUG00000016488	-	100	77.070	Mesocricetus_auratus
ENSODEG00000003178	-	93	58.621	ENSMICG00000045835	-	100	58.621	Microcebus_murinus
ENSODEG00000003178	-	93	74.214	ENSMICG00000047440	-	100	74.843	Microcebus_murinus
ENSODEG00000003178	-	93	67.081	ENSMICG00000028982	-	100	67.081	Microcebus_murinus
ENSODEG00000003178	-	93	50.000	ENSMICG00000038000	CIRBP	95	50.610	Microcebus_murinus
ENSODEG00000003178	-	93	77.070	ENSMOCG00000001511	Rbm3	100	77.070	Microtus_ochrogaster
ENSODEG00000003178	-	93	74.522	ENSMUSG00000031167	Rbm3	100	75.796	Mus_musculus
ENSODEG00000003178	-	93	74.522	MGP_PahariEiJ_G0031463	Rbm3	100	75.796	Mus_pahari
ENSODEG00000003178	-	93	74.522	MGP_SPRETEiJ_G0034063	Rbm3	100	75.796	Mus_spretus
ENSODEG00000003178	-	69	48.462	ENSMPUG00000008455	-	77	48.462	Mustela_putorius_furo
ENSODEG00000003178	-	93	76.433	ENSMPUG00000013632	RBM3	100	76.433	Mustela_putorius_furo
ENSODEG00000003178	-	92	75.484	ENSMLUG00000003996	RBM3	95	76.129	Myotis_lucifugus
ENSODEG00000003178	-	92	50.610	ENSMLUG00000015007	CIRBP	95	50.610	Myotis_lucifugus
ENSODEG00000003178	-	93	77.070	ENSNGAG00000012951	Rbm3	100	77.070	Nannospalax_galili
ENSODEG00000003178	-	93	63.399	ENSNLEG00000031601	-	100	63.399	Nomascus_leucogenys
ENSODEG00000003178	-	93	74.684	ENSNLEG00000028027	-	100	75.316	Nomascus_leucogenys
ENSODEG00000003178	-	93	73.418	ENSNLEG00000019350	-	100	74.051	Nomascus_leucogenys
ENSODEG00000003178	-	73	53.600	ENSOANG00000012483	RBM3	98	53.600	Ornithorhynchus_anatinus
ENSODEG00000003178	-	92	59.333	ENSOCUG00000027309	-	99	59.333	Oryctolagus_cuniculus
ENSODEG00000003178	-	92	75.484	ENSOCUG00000002271	RBM3	95	75.484	Oryctolagus_cuniculus
ENSODEG00000003178	-	93	72.785	ENSOGAG00000026654	RBM3	100	70.064	Otolemur_garnettii
ENSODEG00000003178	-	92	51.534	ENSOARG00000011412	CIRBP	84	51.534	Ovis_aries
ENSODEG00000003178	-	92	70.440	ENSOARG00000012250	RBM3	96	70.440	Ovis_aries
ENSODEG00000003178	-	71	57.391	ENSPPAG00000036405	-	99	57.391	Pan_paniscus
ENSODEG00000003178	-	95	50.296	ENSPPAG00000033562	CIRBP	98	51.220	Pan_paniscus
ENSODEG00000003178	-	93	74.051	ENSPPAG00000034179	RBM3	100	74.684	Pan_paniscus
ENSODEG00000003178	-	93	73.913	ENSPPRG00000013315	RBM3	100	73.913	Panthera_pardus
ENSODEG00000003178	-	93	73.913	ENSPTIG00000017702	RBM3	100	73.913	Panthera_tigris_altaica
ENSODEG00000003178	-	71	63.866	ENSPTIG00000003747	-	72	63.866	Panthera_tigris_altaica
ENSODEG00000003178	-	93	74.051	ENSPTRG00000021864	RBM3	100	74.684	Pan_troglodytes
ENSODEG00000003178	-	71	57.391	ENSPTRG00000044048	-	99	57.391	Pan_troglodytes
ENSODEG00000003178	-	95	50.296	ENSPTRG00000010192	CIRBP	98	51.220	Pan_troglodytes
ENSODEG00000003178	-	95	50.296	ENSPANG00000032449	CIRBP	98	51.220	Papio_anubis
ENSODEG00000003178	-	93	66.234	ENSPANG00000010520	-	100	66.234	Papio_anubis
ENSODEG00000003178	-	51	73.034	ENSPANG00000005561	-	92	72.180	Papio_anubis
ENSODEG00000003178	-	93	74.051	ENSPANG00000034727	-	100	74.684	Papio_anubis
ENSODEG00000003178	-	93	65.806	ENSPSIG00000007145	RBM3	96	66.452	Pelodiscus_sinensis
ENSODEG00000003178	-	92	48.171	ENSPSIG00000002812	CIRBP	95	50.000	Pelodiscus_sinensis
ENSODEG00000003178	-	93	76.433	ENSPEMG00000012411	Rbm3	100	76.433	Peromyscus_maniculatus_bairdii
ENSODEG00000003178	-	92	45.399	ENSPCIG00000015913	-	88	47.826	Phascolarctos_cinereus
ENSODEG00000003178	-	92	49.080	ENSPCIG00000011223	-	70	50.920	Phascolarctos_cinereus
ENSODEG00000003178	-	93	74.051	ENSPPYG00000020314	RBM3	100	74.684	Pongo_abelii
ENSODEG00000003178	-	93	69.281	ENSPCOG00000013194	-	100	73.203	Propithecus_coquereli
ENSODEG00000003178	-	93	63.291	ENSPCOG00000014346	-	100	73.585	Propithecus_coquereli
ENSODEG00000003178	-	92	50.610	ENSPCOG00000028262	CIRBP	98	50.610	Propithecus_coquereli
ENSODEG00000003178	-	93	77.070	ENSPVAG00000015630	RBM3	100	77.070	Pteropus_vampyrus
ENSODEG00000003178	-	92	50.610	ENSPVAG00000005629	CIRBP	95	50.610	Pteropus_vampyrus
ENSODEG00000003178	-	93	77.707	ENSRNOG00000005387	Rbm3	100	77.707	Rattus_norvegicus
ENSODEG00000003178	-	92	50.610	ENSRBIG00000031290	CIRBP	100	50.625	Rhinopithecus_bieti
ENSODEG00000003178	-	93	74.051	ENSRBIG00000040498	RBM3	100	74.684	Rhinopithecus_bieti
ENSODEG00000003178	-	93	74.051	ENSRROG00000034767	RBM3	100	74.684	Rhinopithecus_roxellana
ENSODEG00000003178	-	91	54.667	ENSRROG00000035651	-	96	54.667	Rhinopithecus_roxellana
ENSODEG00000003178	-	92	50.610	ENSRROG00000022862	CIRBP	100	50.625	Rhinopithecus_roxellana
ENSODEG00000003178	-	92	46.853	ENSSBOG00000021043	CIRBP	98	50.610	Saimiri_boliviensis_boliviensis
ENSODEG00000003178	-	70	72.034	ENSSBOG00000035691	-	80	70.755	Saimiri_boliviensis_boliviensis
ENSODEG00000003178	-	62	74.528	ENSSBOG00000005354	-	76	74.528	Saimiri_boliviensis_boliviensis
ENSODEG00000003178	-	92	64.238	ENSSPUG00000000444	RBM3	99	66.447	Sphenodon_punctatus
ENSODEG00000003178	-	93	44.311	ENSSPUG00000006459	CIRBP	96	45.509	Sphenodon_punctatus
ENSODEG00000003178	-	92	64.968	ENSSSCG00000005430	-	99	65.605	Sus_scrofa
ENSODEG00000003178	-	93	70.440	ENSSSCG00000021591	-	100	72.327	Sus_scrofa
ENSODEG00000003178	-	93	67.500	ENSSSCG00000030003	-	100	68.553	Sus_scrofa
ENSODEG00000003178	-	92	49.080	ENSTGUG00000000884	CIRBP	98	50.920	Taeniopygia_guttata
ENSODEG00000003178	-	93	75.796	ENSTTRG00000008587	RBM3	100	75.796	Tursiops_truncatus
ENSODEG00000003178	-	93	50.000	ENSUAMG00000014659	CIRBP	89	50.610	Ursus_americanus
ENSODEG00000003178	-	93	77.070	ENSUAMG00000013289	RBM3	100	77.070	Ursus_americanus
ENSODEG00000003178	-	92	50.610	ENSUMAG00000005794	CIRBP	74	50.610	Ursus_maritimus
ENSODEG00000003178	-	93	77.070	ENSUMAG00000007785	RBM3	100	77.070	Ursus_maritimus
ENSODEG00000003178	-	92	50.610	ENSVVUG00000022844	-	75	50.610	Vulpes_vulpes
ENSODEG00000003178	-	93	76.101	ENSVVUG00000017670	RBM3	100	76.101	Vulpes_vulpes
ENSODEG00000003178	-	92	43.396	ENSXETG00000003281	cirbp	96	44.025	Xenopus_tropicalis