EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003213 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 2267 bases
Position: chrJH651606.1:901898-904164
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004213	RRM_1	PF00076.22	1.4e-54	1	3
ENSODEP00000004213	RRM_1	PF00076.22	1.4e-54	2	3
ENSODEP00000004213	RRM_1	PF00076.22	1.4e-54	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004293	-	2202	-	ENSODEP00000004213	733 (aa)	-	-

Gene Model

Click here to download ENSODEG00000003213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003213's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003213	-	76	91.960	ENSODEG00000013217	-	84	91.960

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003213	-	100	79.501	ENSG00000106344	RBM28	100	80.026	Homo_sapiens
ENSODEG00000003213	-	56	51.481	ENSAPOG00000015512	rbm28	100	49.153	Acanthochromis_polyacanthus
ENSODEG00000003213	-	100	84.375	ENSAMEG00000004776	RBM28	92	84.783	Ailuropoda_melanoleuca
ENSODEG00000003213	-	55	52.871	ENSACIG00000023153	rbm28	99	49.049	Amphilophus_citrinellus
ENSODEG00000003213	-	56	52.055	ENSAOCG00000000462	rbm28	100	48.958	Amphiprion_ocellaris
ENSODEG00000003213	-	56	50.797	ENSAPEG00000012996	rbm28	100	49.086	Amphiprion_percula
ENSODEG00000003213	-	58	49.676	ENSATEG00000001672	rbm28	100	47.686	Anabas_testudineus
ENSODEG00000003213	-	100	80.000	ENSANAG00000033922	RBM28	100	80.000	Aotus_nancymaae
ENSODEG00000003213	-	100	47.044	ENSACLG00000025024	rbm28	100	48.508	Astatotilapia_calliptera
ENSODEG00000003213	-	57	55.140	ENSAMXG00000000763	rbm28	99	56.019	Astyanax_mexicanus
ENSODEG00000003213	-	100	77.926	ENSBTAG00000017001	RBM28	100	77.926	Bos_taurus
ENSODEG00000003213	-	100	77.559	ENSCJAG00000017731	RBM28	100	77.822	Callithrix_jacchus
ENSODEG00000003213	-	100	79.150	ENSCAFG00000001667	RBM28	100	78.884	Canis_familiaris
ENSODEG00000003213	-	100	79.150	ENSCAFG00020021648	RBM28	100	78.884	Canis_lupus_dingo
ENSODEG00000003213	-	100	77.556	ENSCHIG00000014146	RBM28	100	77.556	Capra_hircus
ENSODEG00000003213	-	100	77.516	ENSTSYG00000002892	RBM28	100	77.386	Carlito_syrichta
ENSODEG00000003213	-	83	67.869	ENSCAPG00000013218	RBM28	100	67.869	Cavia_aperea
ENSODEG00000003213	-	100	84.960	ENSCPOG00000006253	RBM28	100	84.697	Cavia_porcellus
ENSODEG00000003213	-	100	78.684	ENSCCAG00000035105	RBM28	100	79.342	Cebus_capucinus
ENSODEG00000003213	-	100	79.003	ENSCATG00000040497	RBM28	100	79.265	Cercocebus_atys
ENSODEG00000003213	-	100	84.064	ENSCLAG00000003707	RBM28	100	84.197	Chinchilla_lanigera
ENSODEG00000003213	-	100	79.578	ENSCSAG00000010161	RBM28	100	80.237	Chlorocebus_sabaeus
ENSODEG00000003213	-	56	83.871	ENSCHOG00000001994	-	63	83.871	Choloepus_hoffmanni
ENSODEG00000003213	-	51	55.281	ENSCPBG00000018088	RBM28	85	55.000	Chrysemys_picta_bellii
ENSODEG00000003213	-	100	73.181	ENSCANG00000038397	RBM28	100	73.720	Colobus_angolensis_palliatus
ENSODEG00000003213	-	65	78.068	ENSCGRG00001021278	Rbm28	100	74.936	Cricetulus_griseus_chok1gshd
ENSODEG00000003213	-	100	75.491	ENSCGRG00000005098	Rbm28	100	75.491	Cricetulus_griseus_crigri
ENSODEG00000003213	-	100	48.205	ENSCSEG00000004212	rbm28	100	47.733	Cynoglossus_semilaevis
ENSODEG00000003213	-	57	53.478	ENSCVAG00000010493	rbm28	99	48.082	Cyprinodon_variegatus
ENSODEG00000003213	-	87	53.273	ENSDARG00000025332	rbm28	100	47.907	Danio_rerio
ENSODEG00000003213	-	100	77.573	ENSDNOG00000001124	RBM28	100	78.892	Dasypus_novemcinctus
ENSODEG00000003213	-	65	77.419	ENSDORG00000004184	Rbm28	97	77.621	Dipodomys_ordii
ENSODEG00000003213	-	69	36.609	FBgn0260456	CG4806	70	37.328	Drosophila_melanogaster
ENSODEG00000003213	-	100	67.107	ENSETEG00000007130	RBM28	99	67.018	Echinops_telfairi
ENSODEG00000003213	-	100	79.270	ENSEASG00005008528	RBM28	100	78.748	Equus_asinus_asinus
ENSODEG00000003213	-	100	77.763	ENSECAG00000007745	RBM28	100	77.865	Equus_caballus
ENSODEG00000003213	-	100	70.496	ENSEEUG00000002389	RBM28	100	70.249	Erinaceus_europaeus
ENSODEG00000003213	-	100	49.042	ENSELUG00000020602	rbm28	100	49.682	Esox_lucius
ENSODEG00000003213	-	100	78.191	ENSFCAG00000000946	RBM28	100	77.926	Felis_catus
ENSODEG00000003213	-	100	86.037	ENSFDAG00000010169	RBM28	100	85.356	Fukomys_damarensis
ENSODEG00000003213	-	57	51.651	ENSGMOG00000007091	rbm28	67	50.435	Gadus_morhua
ENSODEG00000003213	-	57	53.378	ENSGAFG00000004802	rbm28	97	53.378	Gambusia_affinis
ENSODEG00000003213	-	56	53.472	ENSGACG00000012612	rbm28	100	50.067	Gasterosteus_aculeatus
ENSODEG00000003213	-	82	66.500	ENSGAGG00000008873	RBM28	87	65.500	Gopherus_agassizii
ENSODEG00000003213	-	95	78.918	ENSGGOG00000004644	RBM28	97	79.334	Gorilla_gorilla
ENSODEG00000003213	-	93	46.791	ENSHBUG00000009611	rbm28	94	48.927	Haplochromis_burtoni
ENSODEG00000003213	-	100	84.840	ENSHGLG00000005409	RBM28	100	84.190	Heterocephalus_glaber_female
ENSODEG00000003213	-	100	84.840	ENSHGLG00100016458	RBM28	100	84.043	Heterocephalus_glaber_male
ENSODEG00000003213	-	82	48.691	ENSHCOG00000010597	rbm28	65	43.299	Hippocampus_comes
ENSODEG00000003213	-	55	48.166	ENSIPUG00000007103	rbm28	94	45.912	Ictalurus_punctatus
ENSODEG00000003213	-	100	79.243	ENSSTOG00000002169	RBM28	100	80.418	Ictidomys_tridecemlineatus
ENSODEG00000003213	-	100	71.673	ENSJJAG00000022400	Rbm28	100	71.937	Jaculus_jaculus
ENSODEG00000003213	-	57	53.089	ENSKMAG00000013348	rbm28	99	48.964	Kryptolebias_marmoratus
ENSODEG00000003213	-	57	54.072	ENSLBEG00000012998	rbm28	100	49.433	Labrus_bergylta
ENSODEG00000003213	-	76	56.119	ENSLACG00000010485	-	99	56.446	Latimeria_chalumnae
ENSODEG00000003213	-	85	60.825	ENSLOCG00000015541	rbm28	81	62.371	Lepisosteus_oculatus
ENSODEG00000003213	-	100	76.455	ENSLAFG00000010717	RBM28	100	76.323	Loxodonta_africana
ENSODEG00000003213	-	100	78.871	ENSMFAG00000031036	RBM28	100	79.134	Macaca_fascicularis
ENSODEG00000003213	-	100	78.768	ENSMMUG00000007250	RBM28	100	79.161	Macaca_mulatta
ENSODEG00000003213	-	100	78.864	ENSMNEG00000036970	RBM28	100	78.748	Macaca_nemestrina
ENSODEG00000003213	-	86	78.936	ENSMLEG00000037717	RBM28	100	78.936	Mandrillus_leucophaeus
ENSODEG00000003213	-	100	49.936	ENSMAMG00000008525	rbm28	100	50.000	Mastacembelus_armatus
ENSODEG00000003213	-	93	46.496	ENSMZEG00005019625	rbm28	100	47.772	Maylandia_zebra
ENSODEG00000003213	-	100	74.165	ENSMAUG00000002263	Rbm28	100	73.779	Mesocricetus_auratus
ENSODEG00000003213	-	93	76.316	ENSMICG00000000107	RBM28	100	76.039	Microcebus_murinus
ENSODEG00000003213	-	100	78.515	ENSMOCG00000014615	Rbm28	100	77.851	Microtus_ochrogaster
ENSODEG00000003213	-	57	54.567	ENSMMOG00000008600	rbm28	100	51.509	Mola_mola
ENSODEG00000003213	-	100	66.928	ENSMODG00000015151	RBM28	100	67.890	Monodelphis_domestica
ENSODEG00000003213	-	57	51.333	ENSMALG00000006419	rbm28	100	46.442	Monopterus_albus
ENSODEG00000003213	-	100	78.382	MGP_CAROLIEiJ_G0028162	Rbm28	100	77.984	Mus_caroli
ENSODEG00000003213	-	100	77.719	ENSMUSG00000029701	Rbm28	100	77.586	Mus_musculus
ENSODEG00000003213	-	100	78.117	MGP_PahariEiJ_G0021920	Rbm28	100	78.117	Mus_pahari
ENSODEG00000003213	-	100	77.851	MGP_SPRETEiJ_G0029162	Rbm28	100	77.719	Mus_spretus
ENSODEG00000003213	-	100	77.953	ENSMPUG00000006511	RBM28	100	77.165	Mustela_putorius_furo
ENSODEG00000003213	-	100	76.732	ENSMLUG00000002186	RBM28	100	76.802	Myotis_lucifugus
ENSODEG00000003213	-	100	77.261	ENSNGAG00000006480	-	100	76.596	Nannospalax_galili
ENSODEG00000003213	-	100	76.415	ENSNGAG00000017946	-	100	75.337	Nannospalax_galili
ENSODEG00000003213	-	100	79.216	ENSNLEG00000012307	RBM28	100	79.346	Nomascus_leucogenys
ENSODEG00000003213	-	80	80.000	ENSMEUG00000009611	RBM28	91	80.000	Notamacropus_eugenii
ENSODEG00000003213	-	92	72.797	ENSOPRG00000015140	RBM28	90	74.231	Ochotona_princeps
ENSODEG00000003213	-	57	50.993	ENSONIG00000014924	rbm28	100	47.233	Oreochromis_niloticus
ENSODEG00000003213	-	100	60.630	ENSOANG00000000815	-	100	60.602	Ornithorhynchus_anatinus
ENSODEG00000003213	-	100	76.823	ENSOCUG00000003009	RBM28	100	76.432	Oryctolagus_cuniculus
ENSODEG00000003213	-	57	52.584	ENSORLG00000009636	rbm28	99	49.285	Oryzias_latipes
ENSODEG00000003213	-	57	52.809	ENSORLG00020002123	rbm28	66	51.346	Oryzias_latipes_hni
ENSODEG00000003213	-	85	58.373	ENSORLG00015015030	rbm28	98	57.488	Oryzias_latipes_hsok
ENSODEG00000003213	-	57	52.747	ENSOMEG00000007801	rbm28	64	51.417	Oryzias_melastigma
ENSODEG00000003213	-	83	74.957	ENSOGAG00000006011	RBM28	100	75.809	Otolemur_garnettii
ENSODEG00000003213	-	100	77.394	ENSOARG00000002547	RBM28	100	76.852	Ovis_aries
ENSODEG00000003213	-	100	79.030	ENSPPAG00000041730	RBM28	100	79.554	Pan_paniscus
ENSODEG00000003213	-	100	77.556	ENSPPRG00000004420	RBM28	100	77.158	Panthera_pardus
ENSODEG00000003213	-	100	78.059	ENSPTIG00000008550	RBM28	100	77.660	Panthera_tigris_altaica
ENSODEG00000003213	-	100	79.292	ENSPTRG00000019659	RBM28	100	79.817	Pan_troglodytes
ENSODEG00000003213	-	100	78.637	ENSPANG00000022295	RBM28	100	79.030	Papio_anubis
ENSODEG00000003213	-	99	48.632	ENSPKIG00000023453	rbm28	99	49.627	Paramormyrops_kingsleyae
ENSODEG00000003213	-	100	75.963	ENSPEMG00000020673	Rbm28	100	75.963	Peromyscus_maniculatus_bairdii
ENSODEG00000003213	-	100	66.579	ENSPCIG00000012810	RBM28	100	67.323	Phascolarctos_cinereus
ENSODEG00000003213	-	57	52.339	ENSPFOG00000018209	rbm28	100	47.949	Poecilia_formosa
ENSODEG00000003213	-	56	52.125	ENSPLAG00000016078	rbm28	96	46.424	Poecilia_latipinna
ENSODEG00000003213	-	57	53.215	ENSPMEG00000004292	rbm28	100	48.465	Poecilia_mexicana
ENSODEG00000003213	-	55	52.632	ENSPREG00000014287	rbm28	79	49.897	Poecilia_reticulata
ENSODEG00000003213	-	100	79.710	ENSPPYG00000017975	RBM28	100	80.369	Pongo_abelii
ENSODEG00000003213	-	74	69.458	ENSPCAG00000008223	RBM28	83	69.458	Procavia_capensis
ENSODEG00000003213	-	100	78.776	ENSPCOG00000016797	RBM28	100	78.255	Propithecus_coquereli
ENSODEG00000003213	-	79	92.093	ENSPVAG00000005443	RBM28	76	92.093	Pteropus_vampyrus
ENSODEG00000003213	-	100	47.044	ENSPNYG00000014003	rbm28	64	50.301	Pundamilia_nyererei
ENSODEG00000003213	-	100	76.058	ENSRNOG00000005468	Rbm28	100	76.190	Rattus_norvegicus
ENSODEG00000003213	-	100	78.927	ENSRBIG00000033990	RBM28	100	78.665	Rhinopithecus_bieti
ENSODEG00000003213	-	100	79.973	ENSRROG00000040747	RBM28	100	80.108	Rhinopithecus_roxellana
ENSODEG00000003213	-	85	73.822	ENSSBOG00000012308	RBM28	100	74.346	Saimiri_boliviensis_boliviensis
ENSODEG00000003213	-	96	64.432	ENSSHAG00000017017	RBM28	99	64.247	Sarcophilus_harrisii
ENSODEG00000003213	-	57	52.235	ENSSMAG00000003885	rbm28	98	49.675	Scophthalmus_maximus
ENSODEG00000003213	-	57	52.212	ENSSDUG00000014270	rbm28	96	50.602	Seriola_dumerili
ENSODEG00000003213	-	57	52.212	ENSSLDG00000020099	rbm28	64	50.803	Seriola_lalandi_dorsalis
ENSODEG00000003213	-	76	79.699	ENSSARG00000008303	RBM28	81	79.699	Sorex_araneus
ENSODEG00000003213	-	66	69.118	ENSSPUG00000000838	RBM28	79	69.118	Sphenodon_punctatus
ENSODEG00000003213	-	57	49.115	ENSSPAG00000023305	rbm28	100	47.260	Stegastes_partitus
ENSODEG00000003213	-	100	76.623	ENSSSCG00000031847	RBM28	100	77.675	Sus_scrofa
ENSODEG00000003213	-	57	51.225	ENSTRUG00000013311	rbm28	99	47.375	Takifugu_rubripes
ENSODEG00000003213	-	99	49.227	ENSTNIG00000017962	rbm28	99	47.865	Tetraodon_nigroviridis
ENSODEG00000003213	-	86	81.361	ENSTBEG00000012749	RBM28	86	81.361	Tupaia_belangeri
ENSODEG00000003213	-	100	74.770	ENSTTRG00000013647	RBM28	100	74.901	Tursiops_truncatus
ENSODEG00000003213	-	100	71.673	ENSUAMG00000006949	RBM28	100	71.805	Ursus_americanus
ENSODEG00000003213	-	100	78.836	ENSUMAG00000005997	RBM28	100	78.571	Ursus_maritimus
ENSODEG00000003213	-	87	69.757	ENSVPAG00000008304	RBM28	87	69.909	Vicugna_pacos
ENSODEG00000003213	-	100	79.017	ENSVVUG00000007270	RBM28	100	78.752	Vulpes_vulpes
ENSODEG00000003213	-	99	52.611	ENSXETG00000009271	rbm28	99	52.497	Xenopus_tropicalis
ENSODEG00000003213	-	57	51.253	ENSXCOG00000020357	rbm28	99	49.478	Xiphophorus_couchianus
ENSODEG00000003213	-	56	52.381	ENSXMAG00000004415	rbm28	100	47.650	Xiphophorus_maculatus