EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000003232 (Gene tree)
Gene ID: 101572910
Gene Symbol: NCBP1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 43614 bases
Position: chrJH651736.1:438469-482082
Accession: 101572910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004239	MIF4G_like	PF09088.11	1.2e-36	1	1
ENSODEP00000004241	MIF4G_like	PF09088.11	1.2e-36	1	1
ENSODEP00000004240	MIF4G_like	PF09088.11	1.1e-11	1	1
ENSODEP00000004241	MIF4G_like_2	PF09090.11	1.6e-85	1	1
ENSODEP00000004239	MIF4G_like_2	PF09090.11	1.6e-85	1	1
ENSODEP00000004240	MIF4G_like_2	PF09090.11	2e-85	1	1
ENSODEP00000004240	MIF4G	PF02854.19	4.1e-32	1	1
ENSODEP00000004241	MIF4G	PF02854.19	8.4e-31	1	1
ENSODEP00000004239	MIF4G	PF02854.19	8.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004319	NCBP1-201	2449	XM_004645215	ENSODEP00000004239	790 (aa)	XP_004645272	UPI000333AC25
ENSODET00000004321	NCBP1-203	2352	-	ENSODEP00000004241	783 (aa)	-	-
ENSODET00000004320	NCBP1-202	2271	-	ENSODEP00000004240	756 (aa)	-	-

Gene Model

Click here to download ENSODEG00000003232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003232	NCBP1	100	99.620	ENSG00000136937	NCBP1	100	99.620	Homo_sapiens
ENSODEG00000003232	NCBP1	99	83.501	ENSAPOG00000008002	NCBP1	99	82.872	Acanthochromis_polyacanthus
ENSODEG00000003232	NCBP1	100	98.990	ENSAMEG00000004763	NCBP1	100	98.990	Ailuropoda_melanoleuca
ENSODEG00000003232	NCBP1	99	83.859	ENSACIG00000000274	NCBP1	99	83.228	Amphilophus_citrinellus
ENSODEG00000003232	NCBP1	99	83.627	ENSAOCG00000021148	NCBP1	99	82.997	Amphiprion_ocellaris
ENSODEG00000003232	NCBP1	99	83.627	ENSAPEG00000001701	NCBP1	99	82.997	Amphiprion_percula
ENSODEG00000003232	NCBP1	99	82.997	ENSATEG00000006929	NCBP1	99	82.620	Anabas_testudineus
ENSODEG00000003232	NCBP1	96	90.489	ENSAPLG00000016318	NCBP1	100	90.621	Anas_platyrhynchos
ENSODEG00000003232	NCBP1	100	87.141	ENSACAG00000004409	NCBP1	87	87.016	Anolis_carolinensis
ENSODEG00000003232	NCBP1	100	96.582	ENSANAG00000025744	NCBP1	99	99.580	Aotus_nancymaae
ENSODEG00000003232	NCBP1	99	82.997	ENSACLG00000014812	NCBP1	99	82.821	Astatotilapia_calliptera
ENSODEG00000003232	NCBP1	99	81.658	ENSAMXG00000016364	NCBP1	99	81.156	Astyanax_mexicanus
ENSODEG00000003232	NCBP1	100	98.861	ENSBTAG00000009732	NCBP1	100	98.861	Bos_taurus
ENSODEG00000003232	NCBP1	99	34.772	WBGene00018156	ncbp-1	99	34.279	Caenorhabditis_elegans
ENSODEG00000003232	NCBP1	100	99.367	ENSCJAG00000010840	NCBP1	100	99.559	Callithrix_jacchus
ENSODEG00000003232	NCBP1	100	99.367	ENSCAFG00000002445	NCBP1	100	99.367	Canis_familiaris
ENSODEG00000003232	NCBP1	99	99.357	ENSCAFG00020017997	NCBP1	100	99.414	Canis_lupus_dingo
ENSODEG00000003232	NCBP1	100	98.608	ENSCHIG00000020139	NCBP1	100	98.608	Capra_hircus
ENSODEG00000003232	NCBP1	51	99.002	ENSTSYG00000011914	NCBP1	98	99.373	Carlito_syrichta
ENSODEG00000003232	NCBP1	82	89.531	ENSCAPG00000014252	NCBP1	90	89.627	Cavia_aperea
ENSODEG00000003232	NCBP1	98	97.653	ENSCPOG00000012573	NCBP1	99	97.653	Cavia_porcellus
ENSODEG00000003232	NCBP1	100	99.494	ENSCCAG00000032297	NCBP1	100	99.494	Cebus_capucinus
ENSODEG00000003232	NCBP1	100	99.620	ENSCATG00000010052	NCBP1	100	99.620	Cercocebus_atys
ENSODEG00000003232	NCBP1	100	99.747	ENSCLAG00000014339	NCBP1	100	99.747	Chinchilla_lanigera
ENSODEG00000003232	NCBP1	100	99.620	ENSCSAG00000010929	NCBP1	100	99.620	Chlorocebus_sabaeus
ENSODEG00000003232	NCBP1	91	96.610	ENSCHOG00000010332	NCBP1	91	96.610	Choloepus_hoffmanni
ENSODEG00000003232	NCBP1	100	86.164	ENSCPBG00000024344	NCBP1	99	90.556	Chrysemys_picta_bellii
ENSODEG00000003232	NCBP1	99	54.453	ENSCING00000008990	-	99	54.235	Ciona_intestinalis
ENSODEG00000003232	NCBP1	99	53.729	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSODEG00000003232	NCBP1	100	99.620	ENSCANG00000036913	NCBP1	100	99.620	Colobus_angolensis_palliatus
ENSODEG00000003232	NCBP1	100	98.101	ENSCGRG00001015771	Ncbp1	100	98.101	Cricetulus_griseus_chok1gshd
ENSODEG00000003232	NCBP1	99	98.205	ENSCGRG00000010311	Ncbp1	100	98.205	Cricetulus_griseus_crigri
ENSODEG00000003232	NCBP1	99	82.620	ENSCSEG00000012377	NCBP1	99	82.937	Cynoglossus_semilaevis
ENSODEG00000003232	NCBP1	99	80.755	ENSCVAG00000008795	NCBP1	99	81.384	Cyprinodon_variegatus
ENSODEG00000003232	NCBP1	100	98.101	ENSDNOG00000006885	NCBP1	100	98.101	Dasypus_novemcinctus
ENSODEG00000003232	NCBP1	100	93.829	ENSDORG00000013652	Ncbp1	100	93.829	Dipodomys_ordii
ENSODEG00000003232	NCBP1	84	33.871	FBgn0038887	CG7907	87	33.871	Drosophila_melanogaster
ENSODEG00000003232	NCBP1	100	57.391	FBgn0022942	Cbp80	100	57.875	Drosophila_melanogaster
ENSODEG00000003232	NCBP1	89	93.668	ENSETEG00000009705	NCBP1	89	93.668	Echinops_telfairi
ENSODEG00000003232	NCBP1	100	73.585	ENSEBUG00000008386	NCBP1	100	73.333	Eptatretus_burgeri
ENSODEG00000003232	NCBP1	100	98.861	ENSEASG00005022795	NCBP1	100	98.861	Equus_asinus_asinus
ENSODEG00000003232	NCBP1	100	98.987	ENSECAG00000013847	NCBP1	100	98.987	Equus_caballus
ENSODEG00000003232	NCBP1	95	93.625	ENSEEUG00000015973	NCBP1	99	93.227	Erinaceus_europaeus
ENSODEG00000003232	NCBP1	99	81.006	ENSELUG00000022519	NCBP1	99	81.761	Esox_lucius
ENSODEG00000003232	NCBP1	100	99.241	ENSFCAG00000001206	NCBP1	100	99.241	Felis_catus
ENSODEG00000003232	NCBP1	99	89.440	ENSFALG00000001193	NCBP1	100	89.567	Ficedula_albicollis
ENSODEG00000003232	NCBP1	100	99.494	ENSFDAG00000010864	NCBP1	100	99.494	Fukomys_damarensis
ENSODEG00000003232	NCBP1	99	82.390	ENSFHEG00000000655	NCBP1	99	81.887	Fundulus_heteroclitus
ENSODEG00000003232	NCBP1	99	79.623	ENSGMOG00000008653	NCBP1	99	79.623	Gadus_morhua
ENSODEG00000003232	NCBP1	99	90.629	ENSGALG00000002087	NCBP1	100	90.290	Gallus_gallus
ENSODEG00000003232	NCBP1	99	82.763	ENSGAFG00000017787	NCBP1	99	82.636	Gambusia_affinis
ENSODEG00000003232	NCBP1	99	82.058	ENSGACG00000016772	NCBP1	98	81.681	Gasterosteus_aculeatus
ENSODEG00000003232	NCBP1	100	88.805	ENSGAGG00000019483	NCBP1	99	90.278	Gopherus_agassizii
ENSODEG00000003232	NCBP1	100	99.620	ENSGGOG00000001376	NCBP1	100	99.620	Gorilla_gorilla
ENSODEG00000003232	NCBP1	99	82.997	ENSHBUG00000020843	NCBP1	99	82.620	Haplochromis_burtoni
ENSODEG00000003232	NCBP1	100	99.620	ENSHGLG00000001882	NCBP1	100	99.620	Heterocephalus_glaber_female
ENSODEG00000003232	NCBP1	100	86.742	ENSHGLG00000018112	-	100	86.742	Heterocephalus_glaber_female
ENSODEG00000003232	NCBP1	100	99.620	ENSHGLG00100013014	NCBP1	100	99.620	Heterocephalus_glaber_male
ENSODEG00000003232	NCBP1	100	86.490	ENSHGLG00100017373	-	100	86.490	Heterocephalus_glaber_male
ENSODEG00000003232	NCBP1	79	72.266	ENSHCOG00000000204	NCBP1	92	72.266	Hippocampus_comes
ENSODEG00000003232	NCBP1	99	82.138	ENSIPUG00000007275	ncbp1	99	81.761	Ictalurus_punctatus
ENSODEG00000003232	NCBP1	100	99.114	ENSSTOG00000002695	NCBP1	100	99.114	Ictidomys_tridecemlineatus
ENSODEG00000003232	NCBP1	99	82.116	ENSKMAG00000003594	NCBP1	99	85.976	Kryptolebias_marmoratus
ENSODEG00000003232	NCBP1	99	81.242	ENSLBEG00000011661	NCBP1	99	80.745	Labrus_bergylta
ENSODEG00000003232	NCBP1	100	80.224	ENSLACG00000013955	NCBP1	100	79.726	Latimeria_chalumnae
ENSODEG00000003232	NCBP1	99	72.195	ENSLOCG00000009579	NCBP1	99	72.195	Lepisosteus_oculatus
ENSODEG00000003232	NCBP1	100	98.608	ENSLAFG00000005999	NCBP1	100	98.608	Loxodonta_africana
ENSODEG00000003232	NCBP1	100	99.620	ENSMFAG00000030994	NCBP1	100	99.620	Macaca_fascicularis
ENSODEG00000003232	NCBP1	99	99.615	ENSMMUG00000012281	NCBP1	99	99.715	Macaca_mulatta
ENSODEG00000003232	NCBP1	100	99.620	ENSMNEG00000042790	NCBP1	100	99.620	Macaca_nemestrina
ENSODEG00000003232	NCBP1	100	99.620	ENSMLEG00000030374	NCBP1	100	99.620	Mandrillus_leucophaeus
ENSODEG00000003232	NCBP1	99	83.249	ENSMAMG00000014806	NCBP1	99	82.494	Mastacembelus_armatus
ENSODEG00000003232	NCBP1	99	82.997	ENSMZEG00005003469	NCBP1	99	82.620	Maylandia_zebra
ENSODEG00000003232	NCBP1	98	82.682	ENSMZEG00005009290	-	99	82.552	Maylandia_zebra
ENSODEG00000003232	NCBP1	99	97.821	ENSMAUG00000020583	Ncbp1	99	97.821	Mesocricetus_auratus
ENSODEG00000003232	NCBP1	100	98.987	ENSMICG00000012682	NCBP1	100	98.987	Microcebus_murinus
ENSODEG00000003232	NCBP1	100	97.722	ENSMOCG00000015818	Ncbp1	100	97.722	Microtus_ochrogaster
ENSODEG00000003232	NCBP1	91	82.657	ENSMMOG00000002610	NCBP1	99	82.517	Mola_mola
ENSODEG00000003232	NCBP1	100	93.797	ENSMODG00000003202	NCBP1	99	93.544	Monodelphis_domestica
ENSODEG00000003232	NCBP1	99	82.368	ENSMALG00000003547	NCBP1	99	81.864	Monopterus_albus
ENSODEG00000003232	NCBP1	100	97.722	MGP_CAROLIEiJ_G0025982	Ncbp1	100	97.722	Mus_caroli
ENSODEG00000003232	NCBP1	100	97.722	ENSMUSG00000028330	Ncbp1	100	97.722	Mus_musculus
ENSODEG00000003232	NCBP1	100	97.975	MGP_PahariEiJ_G0028318	Ncbp1	100	97.975	Mus_pahari
ENSODEG00000003232	NCBP1	100	97.722	MGP_SPRETEiJ_G0026945	Ncbp1	100	97.722	Mus_spretus
ENSODEG00000003232	NCBP1	100	99.241	ENSMPUG00000006399	NCBP1	100	99.241	Mustela_putorius_furo
ENSODEG00000003232	NCBP1	99	97.818	ENSMLUG00000015201	NCBP1	100	97.818	Myotis_lucifugus
ENSODEG00000003232	NCBP1	100	97.975	ENSNGAG00000014101	Ncbp1	100	97.975	Nannospalax_galili
ENSODEG00000003232	NCBP1	76	86.784	ENSNBRG00000014674	NCBP1	97	86.784	Neolamprologus_brichardi
ENSODEG00000003232	NCBP1	100	99.620	ENSNLEG00000016909	NCBP1	100	99.620	Nomascus_leucogenys
ENSODEG00000003232	NCBP1	90	94.595	ENSMEUG00000010672	NCBP1	90	92.342	Notamacropus_eugenii
ENSODEG00000003232	NCBP1	80	100.000	ENSOPRG00000002144	-	83	100.000	Ochotona_princeps
ENSODEG00000003232	NCBP1	99	82.997	ENSONIG00000001502	NCBP1	99	82.620	Oreochromis_niloticus
ENSODEG00000003232	NCBP1	79	95.666	ENSOANG00000001918	NCBP1	100	95.666	Ornithorhynchus_anatinus
ENSODEG00000003232	NCBP1	98	98.329	ENSOCUG00000013853	NCBP1	97	98.329	Oryctolagus_cuniculus
ENSODEG00000003232	NCBP1	99	81.078	ENSORLG00000011008	NCBP1	99	80.702	Oryzias_latipes
ENSODEG00000003232	NCBP1	99	81.078	ENSORLG00020017455	NCBP1	99	80.702	Oryzias_latipes_hni
ENSODEG00000003232	NCBP1	99	81.203	ENSORLG00015012127	NCBP1	99	80.827	Oryzias_latipes_hsok
ENSODEG00000003232	NCBP1	99	81.704	ENSOMEG00000020698	NCBP1	99	81.579	Oryzias_melastigma
ENSODEG00000003232	NCBP1	100	99.242	ENSOGAG00000013888	NCBP1	100	99.242	Otolemur_garnettii
ENSODEG00000003232	NCBP1	100	98.608	ENSOARG00000011233	NCBP1	100	98.608	Ovis_aries
ENSODEG00000003232	NCBP1	100	99.620	ENSPPAG00000026462	NCBP1	100	99.620	Pan_paniscus
ENSODEG00000003232	NCBP1	100	99.367	ENSPPRG00000022574	NCBP1	100	99.367	Panthera_pardus
ENSODEG00000003232	NCBP1	100	99.367	ENSPTIG00000018507	NCBP1	100	99.367	Panthera_tigris_altaica
ENSODEG00000003232	NCBP1	100	99.620	ENSPTRG00000021167	NCBP1	100	99.620	Pan_troglodytes
ENSODEG00000003232	NCBP1	100	99.620	ENSPANG00000025591	NCBP1	100	99.620	Papio_anubis
ENSODEG00000003232	NCBP1	100	81.132	ENSPKIG00000015861	NCBP1	100	81.006	Paramormyrops_kingsleyae
ENSODEG00000003232	NCBP1	65	89.453	ENSPSIG00000009558	NCBP1	100	89.648	Pelodiscus_sinensis
ENSODEG00000003232	NCBP1	99	79.748	ENSPMGG00000020476	NCBP1	99	79.245	Periophthalmus_magnuspinnatus
ENSODEG00000003232	NCBP1	100	97.595	ENSPEMG00000020105	Ncbp1	100	97.595	Peromyscus_maniculatus_bairdii
ENSODEG00000003232	NCBP1	100	67.621	ENSPMAG00000005533	NCBP1	100	67.621	Petromyzon_marinus
ENSODEG00000003232	NCBP1	100	93.544	ENSPCIG00000015800	NCBP1	99	94.512	Phascolarctos_cinereus
ENSODEG00000003232	NCBP1	99	81.955	ENSPFOG00000004158	NCBP1	99	81.579	Poecilia_formosa
ENSODEG00000003232	NCBP1	99	82.390	ENSPLAG00000020002	NCBP1	99	82.013	Poecilia_latipinna
ENSODEG00000003232	NCBP1	99	82.390	ENSPMEG00000019821	NCBP1	99	82.013	Poecilia_mexicana
ENSODEG00000003232	NCBP1	99	82.286	ENSPREG00000006035	NCBP1	99	81.910	Poecilia_reticulata
ENSODEG00000003232	NCBP1	100	99.620	ENSPPYG00000019426	NCBP1	100	99.620	Pongo_abelii
ENSODEG00000003232	NCBP1	86	98.966	ENSPCAG00000009943	NCBP1	85	98.966	Procavia_capensis
ENSODEG00000003232	NCBP1	82	99.342	ENSPCOG00000020024	NCBP1	98	99.342	Propithecus_coquereli
ENSODEG00000003232	NCBP1	100	98.734	ENSPVAG00000005924	NCBP1	100	98.734	Pteropus_vampyrus
ENSODEG00000003232	NCBP1	91	82.961	ENSPNYG00000002140	NCBP1	99	82.821	Pundamilia_nyererei
ENSODEG00000003232	NCBP1	99	82.286	ENSPNAG00000027753	NCBP1	99	81.910	Pygocentrus_nattereri
ENSODEG00000003232	NCBP1	100	97.848	ENSRNOG00000023605	Ncbp1	100	97.848	Rattus_norvegicus
ENSODEG00000003232	NCBP1	100	99.620	ENSRBIG00000043175	NCBP1	100	99.620	Rhinopithecus_bieti
ENSODEG00000003232	NCBP1	100	99.620	ENSRROG00000029767	NCBP1	100	99.620	Rhinopithecus_roxellana
ENSODEG00000003232	NCBP1	100	99.494	ENSSBOG00000019378	NCBP1	100	99.494	Saimiri_boliviensis_boliviensis
ENSODEG00000003232	NCBP1	71	95.331	ENSSHAG00000015882	NCBP1	72	95.331	Sarcophilus_harrisii
ENSODEG00000003232	NCBP1	99	81.258	ENSSFOG00015001872	NCBP1	100	80.253	Scleropages_formosus
ENSODEG00000003232	NCBP1	99	81.864	ENSSMAG00000007463	NCBP1	99	81.612	Scophthalmus_maximus
ENSODEG00000003232	NCBP1	99	83.143	ENSSDUG00000007019	NCBP1	100	82.716	Seriola_dumerili
ENSODEG00000003232	NCBP1	99	82.872	ENSSLDG00000021924	NCBP1	99	82.494	Seriola_lalandi_dorsalis
ENSODEG00000003232	NCBP1	79	100.000	ENSSARG00000007274	NCBP1	87	90.611	Sorex_araneus
ENSODEG00000003232	NCBP1	100	82.152	ENSSPUG00000008609	NCBP1	100	82.152	Sphenodon_punctatus
ENSODEG00000003232	NCBP1	99	83.375	ENSSPAG00000012550	NCBP1	99	82.997	Stegastes_partitus
ENSODEG00000003232	NCBP1	100	99.241	ENSSSCG00000005366	NCBP1	100	99.241	Sus_scrofa
ENSODEG00000003232	NCBP1	100	83.899	ENSTGUG00000001472	NCBP1	100	84.025	Taeniopygia_guttata
ENSODEG00000003232	NCBP1	99	81.990	ENSTRUG00000005287	NCBP1	99	81.612	Takifugu_rubripes
ENSODEG00000003232	NCBP1	100	95.823	ENSTBEG00000004035	NCBP1	100	95.823	Tupaia_belangeri
ENSODEG00000003232	NCBP1	88	99.185	ENSTTRG00000000507	NCBP1	88	99.185	Tursiops_truncatus
ENSODEG00000003232	NCBP1	100	99.241	ENSUAMG00000005471	NCBP1	100	99.241	Ursus_americanus
ENSODEG00000003232	NCBP1	98	96.879	ENSUMAG00000011865	NCBP1	100	99.414	Ursus_maritimus
ENSODEG00000003232	NCBP1	100	94.937	ENSVPAG00000010537	NCBP1	100	94.937	Vicugna_pacos
ENSODEG00000003232	NCBP1	100	99.367	ENSVVUG00000019725	NCBP1	100	99.367	Vulpes_vulpes
ENSODEG00000003232	NCBP1	100	81.290	ENSXETG00000010179	ncbp1	100	81.290	Xenopus_tropicalis
ENSODEG00000003232	NCBP1	99	82.516	ENSXMAG00000018253	NCBP1	99	82.138	Xiphophorus_maculatus