EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003245 (Gene tree)
Gene ID: 101587210
Gene Symbol: PRDM14
Alias: -
Full Name: PR/SET domain 14
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 15844 bases
Position: chrJH651606.1:6262204-6278047
Accession: 101587210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004260	zf-C2H2	PF00096.26	6.1e-20	1	3
ENSODEP00000004260	zf-C2H2	PF00096.26	6.1e-20	2	3
ENSODEP00000004260	zf-C2H2	PF00096.26	6.1e-20	3	3
ENSODEP00000004260	zf-met	PF12874.7	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004340	PRDM14-201	1680	XM_004637573	ENSODEP00000004260	560 (aa)	XP_004637630	-

Gene Model

Click here to download ENSODEG00000003245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003245	PRDM14	54	36.686	ENSODEG00000009602	ZNF81	88	36.686
ENSODEG00000003245	PRDM14	55	32.927	ENSODEG00000009133	PRDM5	94	32.927

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003245	PRDM14	95	45.741	ENSACIG00000022698	prdm14	86	46.111	Amphilophus_citrinellus
ENSODEG00000003245	PRDM14	90	43.346	ENSACLG00000025407	prdm14	86	45.956	Astatotilapia_calliptera
ENSODEG00000003245	PRDM14	67	61.170	ENSAMXG00000000512	prdm14	79	61.170	Astyanax_mexicanus
ENSODEG00000003245	PRDM14	100	73.611	ENSBTAG00000000060	PRDM14	100	73.611	Bos_taurus
ENSODEG00000003245	PRDM14	100	73.183	ENSCHIG00000009297	PRDM14	100	73.183	Capra_hircus
ENSODEG00000003245	PRDM14	71	83.042	ENSTSYG00000010610	PRDM14	96	83.042	Carlito_syrichta
ENSODEG00000003245	PRDM14	100	71.708	ENSCPOG00000027176	PRDM14	100	71.708	Cavia_porcellus
ENSODEG00000003245	PRDM14	100	67.826	ENSCCAG00000026032	PRDM14	100	69.739	Cebus_capucinus
ENSODEG00000003245	PRDM14	100	84.468	ENSCLAG00000001937	PRDM14	99	84.468	Chinchilla_lanigera
ENSODEG00000003245	PRDM14	68	57.330	ENSGACG00000002829	prdm14	74	57.330	Gasterosteus_aculeatus
ENSODEG00000003245	PRDM14	95	50.185	ENSHBUG00000019660	prdm14	86	50.919	Haplochromis_burtoni
ENSODEG00000003245	PRDM14	95	50.556	ENSMZEG00005021597	prdm14	86	50.735	Maylandia_zebra
ENSODEG00000003245	PRDM14	95	50.556	ENSNBRG00000023669	prdm14	86	50.735	Neolamprologus_brichardi
ENSODEG00000003245	PRDM14	95	67.949	ENSOARG00000003528	PRDM14	100	67.949	Ovis_aries
ENSODEG00000003245	PRDM14	95	50.185	ENSPNYG00000001938	prdm14	86	51.103	Pundamilia_nyererei
ENSODEG00000003245	PRDM14	95	51.654	ENSSDUG00000013311	prdm14	86	52.022	Seriola_dumerili
ENSODEG00000003245	PRDM14	95	51.654	ENSSLDG00000006506	prdm14	87	52.022	Seriola_lalandi_dorsalis
ENSODEG00000003245	PRDM14	67	64.550	ENSTNIG00000008194	prdm14	100	64.550	Tetraodon_nigroviridis
ENSODEG00000003245	PRDM14	52	83.333	ENSVPAG00000010736	-	61	83.333	Vicugna_pacos