EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003281 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 2162 bases
Position: chrJH651635.1:8786756-8788917
Accession: 101571388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004307	RRM_1	PF00076.22	3.9e-52	1	4
ENSODEP00000004307	RRM_1	PF00076.22	3.9e-52	2	4
ENSODEP00000004307	RRM_1	PF00076.22	3.9e-52	3	4
ENSODEP00000004307	RRM_1	PF00076.22	3.9e-52	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004388	-	2115	XM_012516699	ENSODEP00000004307	704 (aa)	XP_012372153	-

Gene Model

Click here to download ENSODEG00000003281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003281	-	62	88.356	ENSODEG00000002441	-	86	88.356
ENSODEG00000003281	-	91	86.308	ENSODEG00000002748	-	91	80.000
ENSODEG00000003281	-	99	80.218	ENSODEG00000007803	-	90	79.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003281	-	91	81.250	ENSG00000115053	NCL	95	84.342	Homo_sapiens
ENSODEG00000003281	-	53	90.212	ENSAMEG00000016289	NCL	91	80.851	Ailuropoda_melanoleuca
ENSODEG00000003281	-	100	64.236	ENSANAG00000024378	-	85	70.455	Aotus_nancymaae
ENSODEG00000003281	-	61	86.621	ENSANAG00000035814	-	53	90.451	Aotus_nancymaae
ENSODEG00000003281	-	100	77.641	ENSBTAG00000016174	NCL	61	90.661	Bos_taurus
ENSODEG00000003281	-	55	81.226	ENSBTAG00000051320	-	82	89.950	Bos_taurus
ENSODEG00000003281	-	64	86.585	ENSBTAG00000026909	-	95	86.622	Bos_taurus
ENSODEG00000003281	-	62	83.168	ENSBTAG00000050728	-	92	79.538	Bos_taurus
ENSODEG00000003281	-	53	90.476	ENSCJAG00000013538	NCL	53	90.451	Callithrix_jacchus
ENSODEG00000003281	-	91	80.699	ENSCAFG00000011037	NCL	91	80.822	Canis_familiaris
ENSODEG00000003281	-	84	81.818	ENSCAFG00020023145	NCL	88	81.788	Canis_lupus_dingo
ENSODEG00000003281	-	90	89.860	ENSCHIG00000021052	-	97	89.547	Capra_hircus
ENSODEG00000003281	-	91	59.601	ENSCHIG00000012143	-	75	75.597	Capra_hircus
ENSODEG00000003281	-	91	71.903	ENSCHIG00000026149	-	53	84.350	Capra_hircus
ENSODEG00000003281	-	93	81.009	ENSCHIG00000010894	-	66	90.433	Capra_hircus
ENSODEG00000003281	-	91	80.822	ENSTSYG00000004355	-	91	80.183	Carlito_syrichta
ENSODEG00000003281	-	90	64.094	ENSTSYG00000036886	-	61	83.520	Carlito_syrichta
ENSODEG00000003281	-	94	78.671	ENSTSYG00000029779	-	96	77.470	Carlito_syrichta
ENSODEG00000003281	-	90	81.917	ENSCAPG00000009405	NCL	91	82.353	Cavia_aperea
ENSODEG00000003281	-	91	85.452	ENSCPOG00000001034	NCL	91	85.890	Cavia_porcellus
ENSODEG00000003281	-	53	90.476	ENSCCAG00000021040	-	53	90.451	Cebus_capucinus
ENSODEG00000003281	-	56	85.222	ENSCCAG00000000551	-	76	86.432	Cebus_capucinus
ENSODEG00000003281	-	91	79.695	ENSCATG00000037033	NCL	53	90.981	Cercocebus_atys
ENSODEG00000003281	-	91	88.702	ENSCLAG00000013080	NCL	91	88.685	Chinchilla_lanigera
ENSODEG00000003281	-	53	90.765	ENSCSAG00000006660	NCL	95	90.433	Chlorocebus_sabaeus
ENSODEG00000003281	-	61	71.889	ENSCHOG00000012860	NCL	78	75.066	Choloepus_hoffmanni
ENSODEG00000003281	-	54	84.794	ENSCANG00000036756	NCL	94	91.667	Colobus_angolensis_palliatus
ENSODEG00000003281	-	92	63.691	ENSCGRG00001022350	-	56	74.339	Cricetulus_griseus_chok1gshd
ENSODEG00000003281	-	92	75.455	ENSCGRG00001024315	-	92	76.772	Cricetulus_griseus_chok1gshd
ENSODEG00000003281	-	86	77.564	ENSCGRG00000017894	-	55	84.416	Cricetulus_griseus_crigri
ENSODEG00000003281	-	92	63.459	ENSCGRG00000000507	-	56	74.339	Cricetulus_griseus_crigri
ENSODEG00000003281	-	100	79.444	ENSDNOG00000010783	-	100	78.889	Dasypus_novemcinctus
ENSODEG00000003281	-	91	72.936	ENSDNOG00000046347	-	91	71.210	Dasypus_novemcinctus
ENSODEG00000003281	-	51	71.148	ENSDORG00000023596	-	52	69.529	Dipodomys_ordii
ENSODEG00000003281	-	53	79.894	ENSDORG00000012513	-	53	79.841	Dipodomys_ordii
ENSODEG00000003281	-	62	57.692	ENSETEG00000008553	-	79	61.828	Echinops_telfairi
ENSODEG00000003281	-	54	85.751	ENSETEG00000018937	-	54	85.714	Echinops_telfairi
ENSODEG00000003281	-	52	85.146	ENSETEG00000014756	-	86	85.146	Echinops_telfairi
ENSODEG00000003281	-	71	66.298	ENSETEG00000008139	-	89	66.116	Echinops_telfairi
ENSODEG00000003281	-	89	78.760	ENSEASG00005008488	NCL	91	80.249	Equus_asinus_asinus
ENSODEG00000003281	-	91	78.971	ENSECAG00000021868	NCL	53	90.186	Equus_caballus
ENSODEG00000003281	-	86	77.036	ENSEEUG00000005913	NCL	86	76.384	Erinaceus_europaeus
ENSODEG00000003281	-	91	80.728	ENSFCAG00000027622	NCL	91	80.851	Felis_catus
ENSODEG00000003281	-	90	85.714	ENSFDAG00000014291	NCL	91	85.231	Fukomys_damarensis
ENSODEG00000003281	-	91	80.793	ENSGGOG00000004300	NCL	100	85.993	Gorilla_gorilla
ENSODEG00000003281	-	91	76.227	ENSHGLG00000011069	-	55	85.638	Heterocephalus_glaber_female
ENSODEG00000003281	-	56	81.735	ENSHGLG00000005133	-	82	81.696	Heterocephalus_glaber_female
ENSODEG00000003281	-	91	85.366	ENSHGLG00000002031	-	91	85.649	Heterocephalus_glaber_female
ENSODEG00000003281	-	91	85.627	ENSHGLG00100014537	-	91	84.992	Heterocephalus_glaber_male
ENSODEG00000003281	-	72	85.067	ENSHGLG00100000745	-	82	85.067	Heterocephalus_glaber_male
ENSODEG00000003281	-	52	79.245	ENSJJAG00000016165	Ncl	91	71.783	Jaculus_jaculus
ENSODEG00000003281	-	91	69.172	ENSLAFG00000013061	NCL	91	66.104	Loxodonta_africana
ENSODEG00000003281	-	91	79.421	ENSMFAG00000040385	NCL	91	81.957	Macaca_fascicularis
ENSODEG00000003281	-	91	79.421	ENSMMUG00000018094	NCL	91	81.957	Macaca_mulatta
ENSODEG00000003281	-	61	86.395	ENSMNEG00000023839	NCL	59	91.786	Macaca_nemestrina
ENSODEG00000003281	-	91	79.847	ENSMLEG00000028935	NCL	53	90.981	Mandrillus_leucophaeus
ENSODEG00000003281	-	91	64.417	ENSMICG00000029975	-	86	74.016	Microcebus_murinus
ENSODEG00000003281	-	100	80.587	ENSMICG00000002538	-	91	79.326	Microcebus_murinus
ENSODEG00000003281	-	91	72.018	MGP_CAROLIEiJ_G0014362	Ncl	53	82.228	Mus_caroli
ENSODEG00000003281	-	91	72.936	ENSMUSG00000026234	Ncl	53	81.963	Mus_musculus
ENSODEG00000003281	-	91	72.561	MGP_PahariEiJ_G0027599	Ncl	53	82.228	Mus_pahari
ENSODEG00000003281	-	91	73.130	MGP_SPRETEiJ_G0015164	Ncl	91	74.006	Mus_spretus
ENSODEG00000003281	-	100	80.389	ENSMLUG00000014547	NCL	100	80.529	Myotis_lucifugus
ENSODEG00000003281	-	92	75.857	ENSNGAG00000002454	-	54	85.195	Nannospalax_galili
ENSODEG00000003281	-	91	58.488	ENSNGAG00000006188	-	53	70.461	Nannospalax_galili
ENSODEG00000003281	-	94	70.545	ENSNLEG00000014107	-	60	76.730	Nomascus_leucogenys
ENSODEG00000003281	-	73	82.011	ENSOGAG00000027852	NCL	84	81.963	Otolemur_garnettii
ENSODEG00000003281	-	70	84.650	ENSOARG00000013710	-	65	88.571	Ovis_aries
ENSODEG00000003281	-	52	74.202	ENSOARG00000004072	-	61	74.202	Ovis_aries
ENSODEG00000003281	-	90	75.655	ENSOARG00000020709	-	56	89.737	Ovis_aries
ENSODEG00000003281	-	91	81.555	ENSPPAG00000011619	NCL	91	81.193	Pan_paniscus
ENSODEG00000003281	-	91	80.699	ENSPPRG00000012603	NCL	91	80.822	Panthera_pardus
ENSODEG00000003281	-	90	80.521	ENSPTIG00000010393	NCL	90	80.645	Panthera_tigris_altaica
ENSODEG00000003281	-	91	80.518	ENSPTRG00000013025	NCL	81	82.232	Pan_troglodytes
ENSODEG00000003281	-	91	79.421	ENSPANG00000010292	NCL	91	81.957	Papio_anubis
ENSODEG00000003281	-	100	75.867	ENSPPYG00000013265	NCL	91	75.152	Pongo_abelii
ENSODEG00000003281	-	91	81.860	ENSPCOG00000003051	-	53	90.716	Propithecus_coquereli
ENSODEG00000003281	-	91	76.308	ENSPCOG00000004160	-	88	83.511	Propithecus_coquereli
ENSODEG00000003281	-	91	80.611	ENSPVAG00000000297	NCL	53	90.981	Pteropus_vampyrus
ENSODEG00000003281	-	91	75.532	ENSRNOG00000018273	Ncl	91	75.951	Rattus_norvegicus
ENSODEG00000003281	-	91	75.762	ENSRBIG00000037525	-	54	88.329	Rhinopithecus_bieti
ENSODEG00000003281	-	75	56.216	ENSRBIG00000035396	-	60	89.527	Rhinopithecus_bieti
ENSODEG00000003281	-	91	79.726	ENSRROG00000028756	-	87	92.661	Rhinopithecus_roxellana
ENSODEG00000003281	-	99	76.581	ENSRROG00000036103	-	99	76.898	Rhinopithecus_roxellana
ENSODEG00000003281	-	91	77.052	ENSSBOG00000029193	-	53	90.186	Saimiri_boliviensis_boliviensis
ENSODEG00000003281	-	55	70.776	ENSSBOG00000023094	-	76	74.436	Saimiri_boliviensis_boliviensis
ENSODEG00000003281	-	70	80.439	ENSSBOG00000027549	-	97	82.688	Saimiri_boliviensis_boliviensis
ENSODEG00000003281	-	92	79.941	ENSSSCG00000016275	NCL	53	90.390	Sus_scrofa
ENSODEG00000003281	-	87	73.727	ENSTBEG00000001546	-	85	73.355	Tupaia_belangeri
ENSODEG00000003281	-	65	76.771	ENSTBEG00000002469	-	66	76.945	Tupaia_belangeri
ENSODEG00000003281	-	91	78.626	ENSTTRG00000009094	NCL	53	88.830	Tursiops_truncatus
ENSODEG00000003281	-	72	89.974	ENSUAMG00000005639	NCL	89	89.977	Ursus_americanus
ENSODEG00000003281	-	91	80.611	ENSUMAG00000015789	NCL	91	81.193	Ursus_maritimus
ENSODEG00000003281	-	73	77.681	ENSVPAG00000001796	NCL	69	77.681	Vicugna_pacos
ENSODEG00000003281	-	91	78.528	ENSVVUG00000025564	NCL	91	76.959	Vulpes_vulpes