EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003328 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1157 bases
Position: chrJH651678.1:4501250-4502406
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004358	Ribosomal_S5_C	PF03719.15	3.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004441	-	702	-	ENSODEP00000004358	233 (aa)	-	-

Gene Model

Click here to download ENSODEG00000003328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003328	-	80	63.786	ENSODEG00000007629	-	92	63.223
ENSODEG00000003328	-	78	82.418	ENSODEG00000005578	-	75	82.162
ENSODEG00000003328	-	80	65.844	ENSODEG00000000424	-	90	65.432
ENSODEG00000003328	-	79	60.000	ENSODEG00000016994	-	81	60.345
ENSODEG00000003328	-	79	64.435	ENSODEG00000018026	-	87	63.750
ENSODEG00000003328	-	57	46.561	ENSODEG00000010744	-	79	53.125
ENSODEG00000003328	-	78	68.487	ENSODEG00000013906	-	81	68.182
ENSODEG00000003328	-	78	60.504	ENSODEG00000000015	-	80	60.331
ENSODEG00000003328	-	78	65.126	ENSODEG00000009611	-	91	64.876
ENSODEG00000003328	-	78	67.647	ENSODEG00000020116	-	89	67.164
ENSODEG00000003328	-	70	58.904	ENSODEG00000002815	-	96	58.447
ENSODEG00000003328	-	52	60.694	ENSODEG00000006454	-	92	57.803
ENSODEG00000003328	-	78	67.647	ENSODEG00000001518	-	90	67.355
ENSODEG00000003328	-	78	59.130	ENSODEG00000007912	-	81	58.298
ENSODEG00000003328	-	79	82.514	ENSODEG00000009513	-	74	82.258
ENSODEG00000003328	-	78	80.769	ENSODEG00000013571	-	77	80.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003328	-	85	53.785	ENSAMEG00000004788	-	87	54.812	Ailuropoda_melanoleuca
ENSODEG00000003328	-	76	61.111	ENSAMEG00000009620	-	100	61.111	Ailuropoda_melanoleuca
ENSODEG00000003328	-	75	62.032	ENSANAG00000029384	-	96	62.032	Aotus_nancymaae
ENSODEG00000003328	-	94	67.273	ENSANAG00000031734	-	80	69.892	Aotus_nancymaae
ENSODEG00000003328	-	100	62.681	ENSANAG00000032222	-	86	69.163	Aotus_nancymaae
ENSODEG00000003328	-	82	63.223	ENSANAG00000037095	-	89	63.713	Aotus_nancymaae
ENSODEG00000003328	-	78	67.686	ENSANAG00000011194	-	88	67.811	Aotus_nancymaae
ENSODEG00000003328	-	83	73.196	ENSANAG00000024142	-	91	74.731	Aotus_nancymaae
ENSODEG00000003328	-	78	87.363	ENSCJAG00000035386	-	76	87.097	Callithrix_jacchus
ENSODEG00000003328	-	100	66.949	ENSCJAG00000000635	-	74	73.656	Callithrix_jacchus
ENSODEG00000003328	-	79	67.782	ENSCAFG00000017509	-	88	67.782	Canis_familiaris
ENSODEG00000003328	-	96	61.132	ENSCHIG00000011477	-	81	64.889	Capra_hircus
ENSODEG00000003328	-	79	61.966	ENSTSYG00000031079	-	94	60.256	Carlito_syrichta
ENSODEG00000003328	-	79	64.286	ENSTSYG00000033139	-	92	63.866	Carlito_syrichta
ENSODEG00000003328	-	71	74.699	ENSTSYG00000034130	-	72	73.964	Carlito_syrichta
ENSODEG00000003328	-	82	61.224	ENSTSYG00000027421	-	90	61.603	Carlito_syrichta
ENSODEG00000003328	-	79	52.525	ENSTSYG00000029261	-	59	84.211	Carlito_syrichta
ENSODEG00000003328	-	75	48.889	ENSCPOG00000026421	-	95	48.444	Cavia_porcellus
ENSODEG00000003328	-	82	72.646	ENSCCAG00000020850	-	83	73.272	Cebus_capucinus
ENSODEG00000003328	-	84	59.671	ENSCCAG00000028120	-	92	60.684	Cebus_capucinus
ENSODEG00000003328	-	78	79.670	ENSCCAG00000030295	-	77	79.570	Cebus_capucinus
ENSODEG00000003328	-	84	71.282	ENSCATG00000036372	-	86	69.048	Cercocebus_atys
ENSODEG00000003328	-	86	67.532	ENSCATG00000031773	-	89	69.907	Cercocebus_atys
ENSODEG00000003328	-	80	75.806	ENSCATG00000032289	-	74	75.806	Cercocebus_atys
ENSODEG00000003328	-	78	80.663	ENSCLAG00000011924	-	76	80.663	Chinchilla_lanigera
ENSODEG00000003328	-	67	71.257	ENSCLAG00000000810	-	72	71.930	Chinchilla_lanigera
ENSODEG00000003328	-	85	55.691	ENSCLAG00000008450	-	90	55.983	Chinchilla_lanigera
ENSODEG00000003328	-	79	61.842	ENSCLAG00000014879	-	97	60.965	Chinchilla_lanigera
ENSODEG00000003328	-	100	69.957	ENSCLAG00000005355	-	78	77.419	Chinchilla_lanigera
ENSODEG00000003328	-	78	87.363	ENSCANG00000040571	-	97	66.234	Colobus_angolensis_palliatus
ENSODEG00000003328	-	100	69.295	ENSCANG00000031673	-	77	78.495	Colobus_angolensis_palliatus
ENSODEG00000003328	-	97	71.366	ENSCANG00000040877	-	77	77.419	Colobus_angolensis_palliatus
ENSODEG00000003328	-	78	68.996	ENSCGRG00001006245	-	87	68.966	Cricetulus_griseus_chok1gshd
ENSODEG00000003328	-	78	68.908	ENSCGRG00001009609	-	97	68.067	Cricetulus_griseus_chok1gshd
ENSODEG00000003328	-	74	55.440	ENSCGRG00001013970	-	89	56.477	Cricetulus_griseus_chok1gshd
ENSODEG00000003328	-	95	57.414	ENSCGRG00001022768	-	79	73.118	Cricetulus_griseus_chok1gshd
ENSODEG00000003328	-	74	55.440	ENSCGRG00000006603	-	89	56.477	Cricetulus_griseus_crigri
ENSODEG00000003328	-	78	79.188	ENSCGRG00000009196	-	82	79.104	Cricetulus_griseus_crigri
ENSODEG00000003328	-	80	65.639	ENSCGRG00000002188	-	92	64.516	Cricetulus_griseus_crigri
ENSODEG00000003328	-	97	55.682	ENSDNOG00000010490	-	91	60.000	Dasypus_novemcinctus
ENSODEG00000003328	-	55	65.625	ENSDNOG00000038786	-	58	64.615	Dasypus_novemcinctus
ENSODEG00000003328	-	55	69.697	ENSDNOG00000045256	-	58	69.697	Dasypus_novemcinctus
ENSODEG00000003328	-	75	54.464	ENSDORG00000024425	-	84	54.464	Dipodomys_ordii
ENSODEG00000003328	-	75	57.534	ENSDORG00000025335	-	89	57.534	Dipodomys_ordii
ENSODEG00000003328	-	79	54.825	ENSDORG00000030221	-	87	54.585	Dipodomys_ordii
ENSODEG00000003328	-	84	60.829	ENSDORG00000023277	-	89	64.039	Dipodomys_ordii
ENSODEG00000003328	-	82	64.216	ENSDORG00000024657	-	90	65.152	Dipodomys_ordii
ENSODEG00000003328	-	99	48.239	ENSETEG00000008215	-	83	50.633	Echinops_telfairi
ENSODEG00000003328	-	73	84.118	ENSEASG00005014316	-	74	80.412	Equus_asinus_asinus
ENSODEG00000003328	-	69	55.249	ENSEEUG00000013311	-	97	55.618	Erinaceus_europaeus
ENSODEG00000003328	-	82	51.562	ENSFCAG00000032362	-	76	50.777	Felis_catus
ENSODEG00000003328	-	79	58.750	ENSFDAG00000003864	-	89	58.333	Fukomys_damarensis
ENSODEG00000003328	-	70	65.714	ENSHGLG00000007652	-	95	65.714	Heterocephalus_glaber_female
ENSODEG00000003328	-	100	51.562	ENSHGLG00000007017	-	96	51.953	Heterocephalus_glaber_female
ENSODEG00000003328	-	100	51.562	ENSHGLG00100002247	-	96	51.953	Heterocephalus_glaber_male
ENSODEG00000003328	-	70	65.714	ENSHGLG00100005590	-	95	65.714	Heterocephalus_glaber_male
ENSODEG00000003328	-	70	70.335	ENSHGLG00100021251	-	96	70.335	Heterocephalus_glaber_male
ENSODEG00000003328	-	81	59.746	ENSJJAG00000021348	-	92	59.307	Jaculus_jaculus
ENSODEG00000003328	-	73	60.476	ENSJJAG00000009920	-	81	60.476	Jaculus_jaculus
ENSODEG00000003328	-	78	49.356	ENSLAFG00000025960	-	97	48.927	Loxodonta_africana
ENSODEG00000003328	-	56	51.099	ENSLAFG00000025689	-	80	51.648	Loxodonta_africana
ENSODEG00000003328	-	100	52.790	ENSLAFG00000032675	-	78	58.919	Loxodonta_africana
ENSODEG00000003328	-	78	76.923	ENSMFAG00000033104	-	74	76.344	Macaca_fascicularis
ENSODEG00000003328	-	88	67.672	ENSMFAG00000040549	-	86	71.362	Macaca_fascicularis
ENSODEG00000003328	-	97	54.762	ENSMFAG00000036581	-	86	62.745	Macaca_fascicularis
ENSODEG00000003328	-	75	62.644	ENSMFAG00000038684	-	79	58.421	Macaca_fascicularis
ENSODEG00000003328	-	78	83.516	ENSMMUG00000000619	-	74	83.152	Macaca_mulatta
ENSODEG00000003328	-	78	84.066	ENSMMUG00000015519	-	76	83.696	Macaca_mulatta
ENSODEG00000003328	-	83	69.091	ENSMMUG00000048399	-	86	70.423	Macaca_mulatta
ENSODEG00000003328	-	80	64.629	ENSMNEG00000032346	-	80	64.474	Macaca_nemestrina
ENSODEG00000003328	-	78	73.118	ENSMNEG00000031742	-	76	73.158	Macaca_nemestrina
ENSODEG00000003328	-	100	54.118	ENSMNEG00000014551	-	86	62.745	Macaca_nemestrina
ENSODEG00000003328	-	72	70.238	ENSMNEG00000003341	-	83	69.822	Macaca_nemestrina
ENSODEG00000003328	-	78	76.374	ENSMNEG00000042646	-	74	75.806	Macaca_nemestrina
ENSODEG00000003328	-	97	53.357	ENSMLEG00000037553	-	90	62.605	Mandrillus_leucophaeus
ENSODEG00000003328	-	78	67.123	ENSMLEG00000041622	-	86	67.265	Mandrillus_leucophaeus
ENSODEG00000003328	-	90	68.201	ENSMLEG00000043748	-	90	70.423	Mandrillus_leucophaeus
ENSODEG00000003328	-	78	62.255	ENSMLEG00000032385	-	87	62.255	Mandrillus_leucophaeus
ENSODEG00000003328	-	96	63.707	ENSMLEG00000029661	-	85	69.585	Mandrillus_leucophaeus
ENSODEG00000003328	-	78	71.053	ENSMAUG00000010957	-	90	71.121	Mesocricetus_auratus
ENSODEG00000003328	-	59	66.480	ENSMAUG00000000957	-	87	66.480	Mesocricetus_auratus
ENSODEG00000003328	-	82	70.233	ENSMAUG00000006005	-	92	70.142	Mesocricetus_auratus
ENSODEG00000003328	-	78	66.981	ENSMICG00000028319	-	88	66.667	Microcebus_murinus
ENSODEG00000003328	-	81	73.298	ENSMOCG00000010673	-	86	73.545	Microtus_ochrogaster
ENSODEG00000003328	-	78	86.264	ENSMOCG00000000227	-	77	86.022	Microtus_ochrogaster
ENSODEG00000003328	-	78	88.525	ENSMOCG00000010657	-	75	88.108	Microtus_ochrogaster
ENSODEG00000003328	-	55	75.969	MGP_PahariEiJ_G0017310	-	87	75.969	Mus_pahari
ENSODEG00000003328	-	79	47.368	ENSMPUG00000015799	-	89	47.368	Mustela_putorius_furo
ENSODEG00000003328	-	73	44.545	ENSMPUG00000000576	-	86	44.545	Mustela_putorius_furo
ENSODEG00000003328	-	70	49.756	ENSMPUG00000004669	-	95	49.756	Mustela_putorius_furo
ENSODEG00000003328	-	78	52.941	ENSMPUG00000015629	-	95	50.000	Mustela_putorius_furo
ENSODEG00000003328	-	76	60.851	ENSMLUG00000025746	-	96	60.851	Myotis_lucifugus
ENSODEG00000003328	-	77	52.991	ENSMLUG00000029122	-	96	51.709	Myotis_lucifugus
ENSODEG00000003328	-	83	51.417	ENSMLUG00000030388	-	91	50.209	Myotis_lucifugus
ENSODEG00000003328	-	71	53.521	ENSMLUG00000022940	-	96	53.521	Myotis_lucifugus
ENSODEG00000003328	-	74	61.860	ENSNGAG00000013032	-	100	61.860	Nannospalax_galili
ENSODEG00000003328	-	82	69.565	ENSNGAG00000009664	-	82	69.778	Nannospalax_galili
ENSODEG00000003328	-	79	67.782	ENSNLEG00000032733	-	93	67.083	Nomascus_leucogenys
ENSODEG00000003328	-	80	72.532	ENSNLEG00000029205	-	88	72.532	Nomascus_leucogenys
ENSODEG00000003328	-	78	59.314	ENSNLEG00000031959	-	87	59.135	Nomascus_leucogenys
ENSODEG00000003328	-	100	71.915	ENSNLEG00000034998	-	76	76.882	Nomascus_leucogenys
ENSODEG00000003328	-	94	55.649	ENSNLEG00000033986	-	86	63.184	Nomascus_leucogenys
ENSODEG00000003328	-	78	65.803	ENSNLEG00000031715	-	77	65.990	Nomascus_leucogenys
ENSODEG00000003328	-	81	70.982	ENSOCUG00000012731	-	87	71.041	Oryctolagus_cuniculus
ENSODEG00000003328	-	70	54.726	ENSOCUG00000026818	-	92	54.229	Oryctolagus_cuniculus
ENSODEG00000003328	-	77	66.337	ENSOCUG00000026627	-	88	66.184	Oryctolagus_cuniculus
ENSODEG00000003328	-	77	65.106	ENSOCUG00000009140	-	91	64.017	Oryctolagus_cuniculus
ENSODEG00000003328	-	94	54.307	ENSOGAG00000024844	-	84	56.897	Otolemur_garnettii
ENSODEG00000003328	-	82	44.130	ENSOARG00000016075	-	88	45.148	Ovis_aries
ENSODEG00000003328	-	100	49.084	ENSOARG00000007975	-	86	51.570	Ovis_aries
ENSODEG00000003328	-	79	67.442	ENSPPAG00000009718	-	85	66.972	Pan_paniscus
ENSODEG00000003328	-	78	85.027	ENSPPAG00000039385	-	87	81.860	Pan_paniscus
ENSODEG00000003328	-	80	54.545	ENSPPAG00000023840	-	93	54.545	Pan_paniscus
ENSODEG00000003328	-	90	61.468	ENSPPAG00000029238	-	89	62.176	Pan_paniscus
ENSODEG00000003328	-	78	73.684	ENSPPAG00000040669	-	73	76.216	Pan_paniscus
ENSODEG00000003328	-	88	65.865	ENSPTIG00000016889	-	77	68.085	Panthera_tigris_altaica
ENSODEG00000003328	-	83	55.422	ENSPTRG00000051295	-	93	55.372	Pan_troglodytes
ENSODEG00000003328	-	78	88.462	ENSPTRG00000045200	-	75	88.172	Pan_troglodytes
ENSODEG00000003328	-	78	76.923	ENSPTRG00000052447	-	77	76.757	Pan_troglodytes
ENSODEG00000003328	-	79	66.977	ENSPTRG00000047742	-	85	66.514	Pan_troglodytes
ENSODEG00000003328	-	77	75.978	ENSPANG00000033494	-	74	75.543	Papio_anubis
ENSODEG00000003328	-	75	62.338	ENSPANG00000005237	-	96	61.905	Papio_anubis
ENSODEG00000003328	-	80	65.939	ENSPANG00000017609	-	91	66.667	Papio_anubis
ENSODEG00000003328	-	78	76.374	ENSPANG00000010731	-	74	76.344	Papio_anubis
ENSODEG00000003328	-	72	61.290	ENSPCIG00000002626	-	88	60.209	Phascolarctos_cinereus
ENSODEG00000003328	-	78	75.824	ENSPCIG00000028447	-	82	75.269	Phascolarctos_cinereus
ENSODEG00000003328	-	75	68.018	ENSPCOG00000013912	-	93	68.468	Propithecus_coquereli
ENSODEG00000003328	-	99	57.348	ENSPCOG00000014063	-	69	66.210	Propithecus_coquereli
ENSODEG00000003328	-	97	54.815	ENSPCOG00000002064	-	86	58.696	Propithecus_coquereli
ENSODEG00000003328	-	78	87.363	ENSRNOG00000030174	AABR07042903.1	77	87.027	Rattus_norvegicus
ENSODEG00000003328	-	75	43.439	ENSRNOG00000022450	AABR07063975.1	96	43.119	Rattus_norvegicus
ENSODEG00000003328	-	79	64.356	ENSRBIG00000030797	-	83	64.039	Rhinopithecus_bieti
ENSODEG00000003328	-	78	64.062	ENSRBIG00000038037	-	88	63.918	Rhinopithecus_bieti
ENSODEG00000003328	-	93	57.872	ENSRBIG00000039210	-	85	64.894	Rhinopithecus_bieti
ENSODEG00000003328	-	80	73.272	ENSRBIG00000028707	-	88	73.272	Rhinopithecus_bieti
ENSODEG00000003328	-	77	60.515	ENSRROG00000031151	-	90	59.746	Rhinopithecus_roxellana
ENSODEG00000003328	-	78	61.765	ENSRROG00000039410	-	86	61.765	Rhinopithecus_roxellana
ENSODEG00000003328	-	80	69.492	ENSRROG00000033610	-	84	69.362	Rhinopithecus_roxellana
ENSODEG00000003328	-	80	63.713	ENSSBOG00000020329	-	88	63.559	Saimiri_boliviensis_boliviensis
ENSODEG00000003328	-	81	60.816	ENSSBOG00000010731	-	86	61.250	Saimiri_boliviensis_boliviensis
ENSODEG00000003328	-	51	92.157	ENSSBOG00000025337	-	67	92.157	Saimiri_boliviensis_boliviensis
ENSODEG00000003328	-	79	71.585	ENSSBOG00000024457	-	78	71.196	Saimiri_boliviensis_boliviensis
ENSODEG00000003328	-	82	61.638	ENSSBOG00000028226	-	87	62.286	Saimiri_boliviensis_boliviensis
ENSODEG00000003328	-	73	54.335	ENSSSCG00000033866	-	84	54.335	Sus_scrofa
ENSODEG00000003328	-	57	49.143	ENSSSCG00000031475	-	78	49.143	Sus_scrofa
ENSODEG00000003328	-	94	54.365	ENSSSCG00000033125	-	83	56.422	Sus_scrofa
ENSODEG00000003328	-	87	61.207	ENSSSCG00000031982	-	86	65.534	Sus_scrofa
ENSODEG00000003328	-	55	84.848	ENSTBEG00000006726	-	75	84.848	Tupaia_belangeri
ENSODEG00000003328	-	78	86.264	ENSVVUG00000015747	-	72	86.022	Vulpes_vulpes